RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 LINC00313P59037 77 aa14.93□□□□□ -0.02
SMARCC1-203ENST00000454240 A0A0U1RQV1 116 aa14.9□□□□□ -0.02
SMARCC1-203ENST00000454240 C20orf166-AS1Q96NR2 134 aa14.9□□□□□ -0.02
SMARCC1-203ENST00000454240 NOTCH2NLQ7Z3S9 236 aa14.89□□□□□ -0.03
SMARCC1-203ENST00000454240 IGHV6-1A0A0B4J1U7 121 aa14.88□□□□□ -0.03
SMARCC1-203ENST00000454240 A0A1B0GVX0 72 aa14.88□□□□□ -0.03
SMARCC1-203ENST00000454240 A8MUU9 505 aa14.87□□□□□ -0.03
SMARCC1-203ENST00000454240 NREPQ16612 68 aa14.87□□□□□ -0.03
SMARCC1-203ENST00000454240 KRTAP16-1A8MUX0 517 aa14.85□□□□□ -0.03
SMARCC1-203ENST00000454240 F8W1H4 67 aa14.85□□□□□ -0.03
SMARCC1-203ENST00000454240 C8orf87E5RJ46 101 aa14.82□□□□□ -0.04
SMARCC1-203ENST00000454240 ATP11AUNQ6ZP68 121 aa14.81□□□□□ -0.04
SMARCC1-203ENST00000454240 NDUFB1O75438 58 aa14.79□□□□□ -0.04
SMARCC1-203ENST00000454240 A8MWP4 228 aa14.78□□□□□ -0.04
SMARCC1-203ENST00000454240 FAT4Q6V0I7 4981 aa14.77□□□□□ -0.04
SMARCC1-203ENST00000454240 IGKV3D-7A0A0C4DH55 119 aa14.74□□□□□ -0.05
SMARCC1-203ENST00000454240 ETDBQ3ZM63 59 aa14.72□□□□□ -0.05
SMARCC1-203ENST00000454240 Q6ZVQ6 151 aa14.69□□□□□ -0.06
SMARCC1-203ENST00000454240 PRR15Q8IV56 129 aa14.68□□□□□ -0.06
SMARCC1-203ENST00000454240 C8orf17Q9NRJ1 99 aa14.67□□□□□ -0.06
SMARCC1-203ENST00000454240 BPY2O14599 106 aa14.64□□□□□ -0.07
SMARCC1-203ENST00000454240 LINC00846Q9NV44 126 aa14.64□□□□□ -0.07
SMARCC1-203ENST00000454240 KRTAP19-2Q3LHN2 52 aa14.6□□□□□ -0.07
SMARCC1-203ENST00000454240 LCE2AQ5TA79 106 aaPredicted RBP14.6□□□□□ -0.07
SMARCC1-203ENST00000454240 K7EQZ3 153 aa14.59□□□□□ -0.07
SMARCC1-203ENST00000454240 UBL5Q9BZL1 73 aa14.58□□□□□ -0.08
SMARCC1-203ENST00000454240 Q8N9P0 234 aaPredicted RBP14.57□□□□□ -0.08
SMARCC1-203ENST00000454240 LCE2CQ5TA81 110 aa14.55□□□□□ -0.08
SMARCC1-203ENST00000454240 MMP24-AS1A0A0U1RRL7 71 aa14.54□□□□□ -0.08
SMARCC1-203ENST00000454240 A0A1B0GV90 55 aa14.54□□□□□ -0.08
SMARCC1-203ENST00000454240 TMEM254Q8TBM7 123 aa14.47□□□□□ -0.09
SMARCC1-203ENST00000454240 Q8N9L7 120 aa14.46□□□□□ -0.09
SMARCC1-203ENST00000454240 ZCCHC13Q8WW36 166 aaKnown RBP14.45□□□□□ -0.1
SMARCC1-203ENST00000454240 MRPL34Q9BQ48 92 aaKnown RBP14.45□□□□□ -0.1
SMARCC1-203ENST00000454240 hDV103S1A0JD37 113 aa14.44□□□□□ -0.1
SMARCC1-203ENST00000454240 ACYP1P07311 99 aa14.36□□□□□ -0.11
SMARCC1-203ENST00000454240 FAM240AA0A1B0GVK7 77 aa14.33□□□□□ -0.12
SMARCC1-203ENST00000454240 CXCL6P80162 114 aa14.33□□□□□ -0.12
SMARCC1-203ENST00000454240 COX6B2Q6YFQ2 88 aa14.33□□□□□ -0.12
SMARCC1-203ENST00000454240 CASC2Q6XLA1 102 aa14.32□□□□□ -0.12
SMARCC1-203ENST00000454240 WFDC13Q8IUB5 93 aa14.32□□□□□ -0.12
SMARCC1-203ENST00000454240 MT1HP80294 61 aa14.31□□□□□ -0.12
SMARCC1-203ENST00000454240 NDUFS5O43920 106 aa14.28□□□□□ -0.12
SMARCC1-203ENST00000454240 HRES1P13985 223 aa14.25□□□□□ -0.13
SMARCC1-203ENST00000454240 HCG22E2RYF7 251 aa14.24□□□□□ -0.13
SMARCC1-203ENST00000454240 SPINK7P58062 85 aa14.23□□□□□ -0.13
SMARCC1-203ENST00000454240 FLGP20930 4061 aaPredicted RBP14.22□□□□□ -0.13
SMARCC1-203ENST00000454240 MPLKIPQ8TAP9 179 aa14.21□□□□□ -0.13
SMARCC1-203ENST00000454240 Q5W150 140 aa14.13□□□□□ -0.15
SMARCC1-203ENST00000454240 RBM12B-AS1Q9P1G2 102 aa14.13□□□□□ -0.15
SMARCC1-203ENST00000454240 ATP5EP2Q5VTU8 51 aa14.12□□□□□ -0.15
SMARCC1-203ENST00000454240 FAM236DA0A1B0GTK5 79 aa14.05□□□□□ -0.16
SMARCC1-203ENST00000454240 FAM236CP0DP71 79 aa14.05□□□□□ -0.16
SMARCC1-203ENST00000454240 M0R2T5 61 aa14.04□□□□□ -0.16
SMARCC1-203ENST00000454240 LINC00643Q86TS7 51 aa14.04□□□□□ -0.16
SMARCC1-203ENST00000454240 J3QR89 54 aa13.99□□□□□ -0.17
SMARCC1-203ENST00000454240 KRTAP10-6P60371 365 aaPredicted RBP13.97□□□□□ -0.17
SMARCC1-203ENST00000454240 TP53AIP1Q9HCN2 124 aa13.97□□□□□ -0.17
SMARCC1-203ENST00000454240 HIST1H4AP62805 103 aaKnown RBP13.96□□□□□ -0.17
SMARCC1-203ENST00000454240 IGKV2D-30A0A075B6S6 120 aa13.95□□□□□ -0.18
SMARCC1-203ENST00000454240 IGKV2-30P06310 120 aa13.95□□□□□ -0.18
SMARCC1-203ENST00000454240 C7orf65Q6ZTY9 151 aa13.95□□□□□ -0.18
SMARCC1-203ENST00000454240 LORP23490 312 aaPredicted RBP13.94□□□□□ -0.18
SMARCC1-203ENST00000454240 A0A087WVE0 104 aa13.83□□□□□ -0.2
SMARCC1-203ENST00000454240 KRTAP9-2Q9BYQ4 174 aa13.77□□□□□ -0.21
SMARCC1-203ENST00000454240 TRAV22A0A0B4J277 110 aa13.71□□□□□ -0.21
SMARCC1-203ENST00000454240 K7ERU9 68 aa13.69□□□□□ -0.22
SMARCC1-203ENST00000454240 UQCRQO14949 82 aa13.68□□□□□ -0.22
SMARCC1-203ENST00000454240 C4orf26Q17RF5 130 aa13.68□□□□□ -0.22
SMARCC1-203ENST00000454240 H1FX-AS1Q4G0G2 97 aa13.67□□□□□ -0.22
SMARCC1-203ENST00000454240 LCE2DQ5TA82 110 aaPredicted RBP13.67□□□□□ -0.22
SMARCC1-203ENST00000454240 KRTAP9-8Q9BYQ0 159 aa13.64□□□□□ -0.23
SMARCC1-203ENST00000454240 CYP4F30PQ9H0H9 118 aa13.61□□□□□ -0.23
SMARCC1-203ENST00000454240 LOC101927531A0A1B0GV80 90 aa13.58□□□□□ -0.24
SMARCC1-203ENST00000454240 H0Y9P7 68 aa13.56□□□□□ -0.24
SMARCC1-203ENST00000454240 OCR1Q9BZK8 76 aa13.56□□□□□ -0.24
SMARCC1-203ENST00000454240 ATOX1O00244 68 aa13.54□□□□□ -0.24
SMARCC1-203ENST00000454240 KRTAP3-1Q9BYR8 98 aa13.54□□□□□ -0.24
SMARCC1-203ENST00000454240 IMUPQ9GZP8 106 aa13.51□□□□□ -0.25
SMARCC1-203ENST00000454240 C1orf64Q8NEQ6 169 aa13.5□□□□□ -0.25
SMARCC1-203ENST00000454240 MT-ATP8P03928 68 aa13.49□□□□□ -0.25
SMARCC1-203ENST00000454240 MT2AP02795 61 aa13.47□□□□□ -0.25
SMARCC1-203ENST00000454240 SCGB1A1P11684 91 aa13.41□□□□□ -0.26
SMARCC1-203ENST00000454240 C5orf47Q569G3 176 aa13.39□□□□□ -0.27
SMARCC1-203ENST00000454240 LINC00208Q96KT6 92 aa13.39□□□□□ -0.27
SMARCC1-203ENST00000454240 MP68P56378 58 aa13.38□□□□□ -0.27
SMARCC1-203ENST00000454240 MT1FP04733 61 aa13.37□□□□□ -0.27
SMARCC1-203ENST00000454240 KRTAP10-10P60014 251 aa13.3□□□□□ -0.28
SMARCC1-203ENST00000454240 S4R3F8 94 aa13.3□□□□□ -0.28
SMARCC1-203ENST00000454240 H3BPC8 53 aa13.28□□□□□ -0.28
SMARCC1-203ENST00000454240 KLKP1Q107X0 134 aa13.27□□□□□ -0.29
SMARCC1-203ENST00000454240 FAM236AA0A1B0GUQ0 79 aa13.25□□□□□ -0.29
SMARCC1-203ENST00000454240 FAM236BA0A1B0GV22 79 aa13.25□□□□□ -0.29
SMARCC1-203ENST00000454240 LCA10Q71F78 164 aa13.23□□□□□ -0.29
SMARCC1-203ENST00000454240 KRTAP9-3Q9BYQ3 159 aa13.19□□□□□ -0.3
SMARCC1-203ENST00000454240 FSIP2Q5CZC0 6907 aa13.19□□□□□ -0.3
SMARCC1-203ENST00000454240 SMIM20Q8N5G0 67 aa13.18□□□□□ -0.3
SMARCC1-203ENST00000454240 TRAV7A0A075B6U4 112 aa13.15□□□□□ -0.3
SMARCC1-203ENST00000454240 CSAG1Q6PB30 78 aa13.15□□□□□ -0.3
SMARCC1-203ENST00000454240 KRTAP9-6A0A140TA67 174 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms