RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 A0A1B0GVX0 72 aa11.55□□□□□ -0.56
LYSMD2-202ENST00000454181 S100A1P23297 94 aa11.55□□□□□ -0.56
LYSMD2-202ENST00000454181 PSMB2P49721 201 aa11.55□□□□□ -0.56
LYSMD2-202ENST00000454181 ZCCHC13Q8WW36 166 aaKnown RBP11.55□□□□□ -0.56
LYSMD2-202ENST00000454181 SPINK7P58062 85 aa11.54□□□□□ -0.56
LYSMD2-202ENST00000454181 VAMP8Q9BV40 100 aa11.54□□□□□ -0.56
LYSMD2-202ENST00000454181 SYNE2Q8WXH0 6885 aaKnown RBP11.54□□□□□ -0.56
LYSMD2-202ENST00000454181 FXYD2P54710 66 aa11.53□□□□□ -0.56
LYSMD2-202ENST00000454181 VPS25Q9BRG1 176 aa11.53□□□□□ -0.56
LYSMD2-202ENST00000454181 COX6CP09669 75 aa11.51□□□□□ -0.57
LYSMD2-202ENST00000454181 KRTAP19-6Q3LI70 58 aa11.5□□□□□ -0.57
LYSMD2-202ENST00000454181 A8MWP4 228 aa11.48□□□□□ -0.57
LYSMD2-202ENST00000454181 UBE2V1Q13404 147 aa11.48□□□□□ -0.57
LYSMD2-202ENST00000454181 J3KT08 172 aa11.44□□□□□ -0.58
LYSMD2-202ENST00000454181 LYRM7Q5U5X0 104 aa11.44□□□□□ -0.58
LYSMD2-202ENST00000454181 DSCR8Q96T75 97 aa11.43□□□□□ -0.58
LYSMD2-202ENST00000454181 RBM3P98179 157 aaKnown RBP11.42□□□□□ -0.58
LYSMD2-202ENST00000454181 NDUFB1O75438 58 aa11.41□□□□□ -0.58
LYSMD2-202ENST00000454181 WFDC13Q8IUB5 93 aa11.41□□□□□ -0.58
LYSMD2-202ENST00000454181 C21orf62-AS1Q17RA5 79 aa11.4□□□□□ -0.58
LYSMD2-202ENST00000454181 K7ERJ3 54 aa11.39□□□□□ -0.59
LYSMD2-202ENST00000454181 HSD52Q0P140 79 aa11.36□□□□□ -0.59
LYSMD2-202ENST00000454181 Q8N9P0 234 aaPredicted RBP11.36□□□□□ -0.59
LYSMD2-202ENST00000454181 C9JAW5 83 aa11.33□□□□□ -0.6
LYSMD2-202ENST00000454181 SCGB1C2P0DMR2 95 aa11.32□□□□□ -0.6
LYSMD2-202ENST00000454181 Q6ZQT0 140 aa11.3□□□□□ -0.6
LYSMD2-202ENST00000454181 C8orf17Q9NRJ1 99 aa11.28□□□□□ -0.6
LYSMD2-202ENST00000454181 SMCPP49901 116 aaPredicted RBP11.27□□□□□ -0.61
LYSMD2-202ENST00000454181 KRTAP6-3Q3LI67 103 aa11.26□□□□□ -0.61
LYSMD2-202ENST00000454181 BAALC-AS2P0C853 105 aa11.25□□□□□ -0.61
LYSMD2-202ENST00000454181 IGKV3D-7A0A0C4DH55 119 aa11.21□□□□□ -0.61
LYSMD2-202ENST00000454181 Q6ZVQ6 151 aa11.2□□□□□ -0.62
LYSMD2-202ENST00000454181 H1FX-AS1Q4G0G2 97 aa11.19□□□□□ -0.62
LYSMD2-202ENST00000454181 A0A1B0GW54 56 aa11.15□□□□□ -0.62
LYSMD2-202ENST00000454181 JMJD7-PLA2G4BH0Y9G9 81 aa11.12□□□□□ -0.63
LYSMD2-202ENST00000454181 UQCR10Q9UDW1 63 aa11.11□□□□□ -0.63
LYSMD2-202ENST00000454181 PRR15Q8IV56 129 aa11.09□□□□□ -0.63
LYSMD2-202ENST00000454181 PDE6GP18545 87 aa11.08□□□□□ -0.64
LYSMD2-202ENST00000454181 PYY3Q5JQD4 70 aa11.08□□□□□ -0.64
LYSMD2-202ENST00000454181 MRPL34Q9BQ48 92 aaKnown RBP11.08□□□□□ -0.64
LYSMD2-202ENST00000454181 LOC110117498A0A087WWA1 95 aa11.07□□□□□ -0.64
LYSMD2-202ENST00000454181 TMEM254Q8TBM7 123 aa11.07□□□□□ -0.64
LYSMD2-202ENST00000454181 NDUFS5O43920 106 aa11.06□□□□□ -0.64
LYSMD2-202ENST00000454181 ATXN8Q156A1 80 aa11.04□□□□□ -0.64
LYSMD2-202ENST00000454181 NREPQ16612 68 aa11.04□□□□□ -0.64
LYSMD2-202ENST00000454181 MMP24-AS1A0A0U1RRL7 71 aa11.01□□□□□ -0.65
LYSMD2-202ENST00000454181 IGKV2D-30A0A075B6S6 120 aa11□□□□□ -0.65
LYSMD2-202ENST00000454181 IGKV2-30P06310 120 aa11□□□□□ -0.65
LYSMD2-202ENST00000454181 hDV103S1A0JD37 113 aa10.99□□□□□ -0.65
LYSMD2-202ENST00000454181 C14orf132Q9NPU4 83 aa10.99□□□□□ -0.65
LYSMD2-202ENST00000454181 C7orf65Q6ZTY9 151 aa10.94□□□□□ -0.66
LYSMD2-202ENST00000454181 A6NN06 94 aa10.89□□□□□ -0.67
LYSMD2-202ENST00000454181 K7EQZ3 153 aa10.89□□□□□ -0.67
LYSMD2-202ENST00000454181 NAA38Q9BRA0 125 aaKnown RBP10.89□□□□□ -0.67
LYSMD2-202ENST00000454181 FAM236AA0A1B0GUQ0 79 aa10.88□□□□□ -0.67
LYSMD2-202ENST00000454181 FAM236BA0A1B0GV22 79 aa10.88□□□□□ -0.67
LYSMD2-202ENST00000454181 NEBP20929 6669 aa10.87□□□□□ -0.67
LYSMD2-202ENST00000454181 Q5W150 140 aa10.85□□□□□ -0.67
LYSMD2-202ENST00000454181 C4orf26Q17RF5 130 aa10.83□□□□□ -0.68
LYSMD2-202ENST00000454181 M0R143 59 aa10.82□□□□□ -0.68
LYSMD2-202ENST00000454181 C5orf47Q569G3 176 aa10.81□□□□□ -0.68
LYSMD2-202ENST00000454181 BPY2O14599 106 aa10.79□□□□□ -0.68
LYSMD2-202ENST00000454181 Q5VV11 94 aa10.79□□□□□ -0.68
LYSMD2-202ENST00000454181 HCG22E2RYF7 251 aa10.74□□□□□ -0.69
LYSMD2-202ENST00000454181 CASC2Q6XLA1 102 aa10.73□□□□□ -0.69
LYSMD2-202ENST00000454181 MT1BP07438 61 aa10.72□□□□□ -0.69
LYSMD2-202ENST00000454181 CSAG1Q6PB30 78 aa10.69□□□□□ -0.7
LYSMD2-202ENST00000454181 CXCL6P80162 114 aa10.68□□□□□ -0.7
LYSMD2-202ENST00000454181 KRTAP20-1Q3LI63 56 aa10.68□□□□□ -0.7
LYSMD2-202ENST00000454181 S4R3F8 94 aa10.68□□□□□ -0.7
LYSMD2-202ENST00000454181 MUC12Q9UKN1 5478 aa10.67□□□□□ -0.7
LYSMD2-202ENST00000454181 TMA7Q9Y2S6 64 aaKnown RBP10.67□□□□□ -0.7
LYSMD2-202ENST00000454181 Q8N9L7 120 aa10.66□□□□□ -0.7
LYSMD2-202ENST00000454181 KRTAP19-8Q3LI54 63 aa10.65□□□□□ -0.7
LYSMD2-202ENST00000454181 SPRR2GQ9BYE4 73 aa10.65□□□□□ -0.7
LYSMD2-202ENST00000454181 TSTD3H0UI37 97 aa10.61□□□□□ -0.71
LYSMD2-202ENST00000454181 H3BT86 120 aa10.61□□□□□ -0.71
LYSMD2-202ENST00000454181 KRTAP10-5P60370 271 aa10.61□□□□□ -0.71
LYSMD2-202ENST00000454181 C1orf64Q8NEQ6 169 aa10.58□□□□□ -0.72
LYSMD2-202ENST00000454181 KRTAP3-1Q9BYR8 98 aa10.58□□□□□ -0.72
LYSMD2-202ENST00000454181 LCA10Q71F78 164 aa10.56□□□□□ -0.72
LYSMD2-202ENST00000454181 KLKP1Q107X0 134 aa10.52□□□□□ -0.73
LYSMD2-202ENST00000454181 BATFQ16520 125 aa10.52□□□□□ -0.73
LYSMD2-202ENST00000454181 KRTAP5-9P26371 169 aa10.5□□□□□ -0.73
LYSMD2-202ENST00000454181 IMUPQ9GZP8 106 aa10.5□□□□□ -0.73
LYSMD2-202ENST00000454181 LOC100996750A0A140TA64 210 aa10.46□□□□□ -0.73
LYSMD2-202ENST00000454181 KRTAP4-6Q9BYQ5 205 aa10.46□□□□□ -0.73
LYSMD2-202ENST00000454181 C9orf118A6NHY6 69 aa10.43□□□□□ -0.74
LYSMD2-202ENST00000454181 A0A1W2PPM0 123 aa10.4□□□□□ -0.74
LYSMD2-202ENST00000454181 UBL5Q9BZL1 73 aa10.4□□□□□ -0.74
LYSMD2-202ENST00000454181 KMT2DO14686 5537 aa10.38□□□□□ -0.75
LYSMD2-202ENST00000454181 CRIPTQ9P021 101 aa10.37□□□□□ -0.75
LYSMD2-202ENST00000454181 TP53AIP1Q9HCN2 124 aa10.35□□□□□ -0.75
LYSMD2-202ENST00000454181 MDN1Q9NU22 5596 aa10.33□□□□□ -0.75
LYSMD2-202ENST00000454181 TAX1BP3O14907 124 aa10.31□□□□□ -0.76
LYSMD2-202ENST00000454181 SMIM6P0DI80 62 aa10.31□□□□□ -0.76
LYSMD2-202ENST00000454181 KRTAP2-3P0C7H8 128 aa10.28□□□□□ -0.76
LYSMD2-202ENST00000454181 KRTAP2-4Q9BYR9 128 aa10.28□□□□□ -0.76
LYSMD2-202ENST00000454181 SPCS1Q9Y6A9 102 aa10.25□□□□□ -0.77
LYSMD2-202ENST00000454181 CYP4F30PQ9H0H9 118 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms