RNA–Protein interactions for RNA: ENST00000453386.6

TRA2B-205, Transcript of transformer 2 beta homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRA2B, Length 2,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-205ENST00000453386 ZNF861PO60384 105 aa9.36□□□□□ -0.91
TRA2B-205ENST00000453386 LCA10Q71F78 164 aa9.36□□□□□ -0.91
TRA2B-205ENST00000453386 DYNC2H1Q8NCM8 4307 aaKnown RBP9.36□□□□□ -0.91
TRA2B-205ENST00000453386 RTL8CO15255 209 aa9.36□□□□□ -0.91
TRA2B-205ENST00000453386 HRES1P13985 223 aa9.34□□□□□ -0.91
TRA2B-205ENST00000453386 LINC01558Q9Y6Z2 57 aa9.32□□□□□ -0.92
TRA2B-205ENST00000453386 FRAS1Q86XX4 4008 aa9.32□□□□□ -0.92
TRA2B-205ENST00000453386 CIRBP-AS1Q8TBR5 109 aa9.3□□□□□ -0.92
TRA2B-205ENST00000453386 Q5W150 140 aa9.29□□□□□ -0.92
TRA2B-205ENST00000453386 ATP11AUNQ6ZP68 121 aa9.29□□□□□ -0.92
TRA2B-205ENST00000453386 PLAC8Q9NZF1 115 aa9.29□□□□□ -0.92
TRA2B-205ENST00000453386 DNAH8Q96JB1 4490 aa9.29□□□□□ -0.92
TRA2B-205ENST00000453386 CDC42SE1Q9NRR8 79 aa9.26□□□□□ -0.93
TRA2B-205ENST00000453386 HECTD4Q9Y4D8 3996 aa9.26□□□□□ -0.93
TRA2B-205ENST00000453386 STARD9Q9P2P6 4700 aa9.25□□□□□ -0.93
TRA2B-205ENST00000453386 PRR26Q8N8Z3 221 aa9.24□□□□□ -0.93
TRA2B-205ENST00000453386 SPINK7P58062 85 aa9.23□□□□□ -0.93
TRA2B-205ENST00000453386 IGLV7-43P04211 117 aa9.22□□□□□ -0.93
TRA2B-205ENST00000453386 VPS13DQ5THJ4 4388 aa9.22□□□□□ -0.93
TRA2B-205ENST00000453386 TGP01266 2768 aa9.22□□□□□ -0.93
TRA2B-205ENST00000453386 KTN1-AS1Q86SY8 53 aa9.21□□□□□ -0.94
TRA2B-205ENST00000453386 KRTAP13-3Q3SY46 172 aa9.19□□□□□ -0.94
TRA2B-205ENST00000453386 KMT2AQ03164 3969 aa9.18□□□□□ -0.94
TRA2B-205ENST00000453386 RETNLBQ9BQ08 111 aa9.18□□□□□ -0.94
TRA2B-205ENST00000453386 ACYP2P14621 99 aa9.17□□□□□ -0.94
TRA2B-205ENST00000453386 DNAH17Q9UFH2 4485 aa9.16□□□□□ -0.94
TRA2B-205ENST00000453386 A6NN06 94 aa9.16□□□□□ -0.94
TRA2B-205ENST00000453386 MEGF8Q7Z7M0 2845 aa9.16□□□□□ -0.94
TRA2B-205ENST00000453386 DNAH2Q9P225 4427 aa9.16□□□□□ -0.94
TRA2B-205ENST00000453386 C1orf134Q5TEV5 83 aa9.14□□□□□ -0.95
TRA2B-205ENST00000453386 C8orf87E5RJ46 101 aa9.14□□□□□ -0.95
TRA2B-205ENST00000453386 SSBP3-AS1Q7Z2R9 100 aa9.13□□□□□ -0.95
TRA2B-205ENST00000453386 LINC00313P59037 77 aa9.13□□□□□ -0.95
TRA2B-205ENST00000453386 FBN3Q75N90 2809 aa9.1□□□□□ -0.95
TRA2B-205ENST00000453386 RBM12B-AS1Q9P1G2 102 aa9.09□□□□□ -0.95
TRA2B-205ENST00000453386 FAM229AH3BQW9 127 aa9.08□□□□□ -0.96
TRA2B-205ENST00000453386 PRKDCP78527 4128 aaKnown RBP9.07□□□□□ -0.96
TRA2B-205ENST00000453386 DMAC1Q96GE9 116 aa9.07□□□□□ -0.96
TRA2B-205ENST00000453386 LY6G6CO95867 125 aa9.05□□□□□ -0.96
TRA2B-205ENST00000453386 C7orf65Q6ZTY9 151 aa9.03□□□□□ -0.96
TRA2B-205ENST00000453386 KRTAP13-2Q52LG2 175 aa9.02□□□□□ -0.97
TRA2B-205ENST00000453386 ALMS1Q8TCU4 4167 aa9.02□□□□□ -0.97
TRA2B-205ENST00000453386 IGKV2-30P06310 120 aa9.01□□□□□ -0.97
TRA2B-205ENST00000453386 KRTAP10-2P60368 255 aa9.01□□□□□ -0.97
TRA2B-205ENST00000453386 A0A1B0GU69 56 aa9□□□□□ -0.97
TRA2B-205ENST00000453386 DNAH6Q9C0G6 4158 aa9□□□□□ -0.97
TRA2B-205ENST00000453386 DNAH11Q96DT5 4516 aa8.99□□□□□ -0.97
TRA2B-205ENST00000453386 IGKV2D-30A0A075B6S6 120 aa8.98□□□□□ -0.97
TRA2B-205ENST00000453386 KRTAP16-1A8MUX0 517 aa8.94□□□□□ -0.98
TRA2B-205ENST00000453386 DNAH5Q8TE73 4624 aa8.92□□□□□ -0.98
TRA2B-205ENST00000453386 LRP1BQ9NZR2 4599 aa8.89□□□□□ -0.99
TRA2B-205ENST00000453386 KRTAP10-1P60331 282 aa8.89□□□□□ -0.99
TRA2B-205ENST00000453386 C4orf48Q5BLP8 95 aa8.87□□□□□ -0.99
TRA2B-205ENST00000453386 KRTAP1-4P0C5Y4 121 aa8.85□□□□□ -0.99
TRA2B-205ENST00000453386 UQCR11O14957 56 aa8.85□□□□□ -0.99
TRA2B-205ENST00000453386 MIR22HGQ0VDD5 57 aa8.85□□□□□ -0.99
TRA2B-205ENST00000453386 SPATA8Q6RVD6 105 aa8.85□□□□□ -0.99
TRA2B-205ENST00000453386 PRAC1Q96KF2 57 aa8.85□□□□□ -0.99
TRA2B-205ENST00000453386 PLA2G1BP04054 148 aaKnown RBP8.84□□□□□ -0.99
TRA2B-205ENST00000453386 Q6ZSA8 131 aa8.83□□□□□ -1
TRA2B-205ENST00000453386 SPINK1P00995 79 aa8.82□□□□□ -1
TRA2B-205ENST00000453386 TYMSOSQ8TAI1 123 aa8.81□□□□□ -1
TRA2B-205ENST00000453386 ADM2Q7Z4H4 148 aa8.81□□□□□ -1
TRA2B-205ENST00000453386 Q8N1X5 172 aa8.78□□□□□ -1
TRA2B-205ENST00000453386 VPS13BQ7Z7G8 4022 aa8.76□□□□□ -1.01
TRA2B-205ENST00000453386 DNHD1Q96M86 4753 aa8.72□□□□□ -1.01
TRA2B-205ENST00000453386 PKD1P98161 4303 aa8.71□□□□□ -1.01
TRA2B-205ENST00000453386 HYDINQ4G0P3 5121 aa8.68□□□□□ -1.02
TRA2B-205ENST00000453386 LINC00304Q8N9R0 145 aa8.67□□□□□ -1.02
TRA2B-205ENST00000453386 FAT2Q9NYQ8 4349 aa8.65□□□□□ -1.02
TRA2B-205ENST00000453386 C9orf92A6NGG3 77 aa8.61□□□□□ -1.03
TRA2B-205ENST00000453386 LINC01554Q52M75 96 aa8.58□□□□□ -1.04
TRA2B-205ENST00000453386 SMR3BP02814 79 aaPredicted RBP8.56□□□□□ -1.04
TRA2B-205ENST00000453386 CSAG1Q6PB30 78 aa8.55□□□□□ -1.04
TRA2B-205ENST00000453386 RPS29P62273 56 aaKnown RBP8.54□□□□□ -1.04
TRA2B-205ENST00000453386 PKHD1P08F94 4074 aa8.5□□□□□ -1.05
TRA2B-205ENST00000453386 H0YAA0 97 aa8.5□□□□□ -1.05
TRA2B-205ENST00000453386 A8MUU9 505 aa8.49□□□□□ -1.05
TRA2B-205ENST00000453386 KRTAP3-1Q9BYR8 98 aa8.49□□□□□ -1.05
TRA2B-205ENST00000453386 C20orf166-AS1Q96NR2 134 aa8.48□□□□□ -1.05
TRA2B-205ENST00000453386 A0A1B0GU33 70 aa8.46□□□□□ -1.05
TRA2B-205ENST00000453386 SACSQ9NZJ4 4579 aa8.42□□□□□ -1.06
TRA2B-205ENST00000453386 FAT1Q14517 4588 aa8.4□□□□□ -1.06
TRA2B-205ENST00000453386 H1FX-AS1Q4G0G2 97 aa8.4□□□□□ -1.06
TRA2B-205ENST00000453386 DYNC1H1Q14204 4646 aaKnown RBP8.37□□□□□ -1.07
TRA2B-205ENST00000453386 COX6B2Q6YFQ2 88 aa8.31□□□□□ -1.08
TRA2B-205ENST00000453386 FLG2Q5D862 2391 aaPredicted RBP8.3□□□□□ -1.08
TRA2B-205ENST00000453386 KRTAP10-4P60372 401 aaPredicted RBP8.28□□□□□ -1.08
TRA2B-205ENST00000453386 PKHD1L1Q86WI1 4243 aa8.27□□□□□ -1.09
TRA2B-205ENST00000453386 KRTAP25-1Q3LHN0 102 aa8.26□□□□□ -1.09
TRA2B-205ENST00000453386 K7ERS5 55 aa8.25□□□□□ -1.09
TRA2B-205ENST00000453386 APOBP04114 4563 aaKnown RBP8.25□□□□□ -1.09
TRA2B-205ENST00000453386 DMBT1Q9UGM3 2413 aaPredicted RBP8.22□□□□□ -1.09
TRA2B-205ENST00000453386 CRIPTQ9P021 101 aa8.21□□□□□ -1.09
TRA2B-205ENST00000453386 A0A1B0GVY2 172 aa8.2□□□□□ -1.1
TRA2B-205ENST00000453386 H3BS24 57 aa8.19□□□□□ -1.1
TRA2B-205ENST00000453386 A0A0D9SG42 100 aa8.11□□□□□ -1.11
TRA2B-205ENST00000453386 KRTAP10-6P60371 365 aaPredicted RBP8.09□□□□□ -1.11
TRA2B-205ENST00000453386 KRTAP3-3Q9BYR6 98 aa8.09□□□□□ -1.11
TRA2B-205ENST00000453386 LRP1Q07954 4544 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms