RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 IGKV2-30P06310 120 aa4.95□□□□□ -1.62
SMCO1-202ENST00000452776 JMJD1CQ15652 2540 aa4.95□□□□□ -1.62
SMCO1-202ENST00000452776 APCP25054 2843 aa4.94□□□□□ -1.62
SMCO1-202ENST00000452776 F8P00451 2351 aa4.94□□□□□ -1.62
SMCO1-202ENST00000452776 MXRA5Q9NR99 2828 aa4.94□□□□□ -1.62
SMCO1-202ENST00000452776 IGLV5-52A0A0A0MRZ9 124 aa4.94□□□□□ -1.62
SMCO1-202ENST00000452776 LY6G6CO95867 125 aa4.94□□□□□ -1.62
SMCO1-202ENST00000452776 K7ERS5 55 aa4.93□□□□□ -1.62
SMCO1-202ENST00000452776 FN1P02751 2386 aaKnown RBP4.93□□□□□ -1.62
SMCO1-202ENST00000452776 IGLV9-49A0A0B4J1Y8 123 aa4.93□□□□□ -1.62
SMCO1-202ENST00000452776 SEC61BP60468 96 aaKnown RBP4.93□□□□□ -1.62
SMCO1-202ENST00000452776 KRTAP13-1Q8IUC0 172 aa4.93□□□□□ -1.62
SMCO1-202ENST00000452776 PDZD2O15018 2839 aa4.92□□□□□ -1.62
SMCO1-202ENST00000452776 K7EIL1 84 aa4.92□□□□□ -1.62
SMCO1-202ENST00000452776 CELSR2Q9HCU4 2923 aa4.92□□□□□ -1.62
SMCO1-202ENST00000452776 MTORP42345 2549 aa4.91□□□□□ -1.62
SMCO1-202ENST00000452776 CASC10Q5T4H9 136 aa4.91□□□□□ -1.62
SMCO1-202ENST00000452776 VPS13CQ709C8 3753 aa4.91□□□□□ -1.62
SMCO1-202ENST00000452776 KRTAP10-3P60369 221 aa4.9□□□□□ -1.62
SMCO1-202ENST00000452776 LINC00304Q8N9R0 145 aa4.9□□□□□ -1.63
SMCO1-202ENST00000452776 HIVEP1P15822 2718 aa4.9□□□□□ -1.63
SMCO1-202ENST00000452776 IGKV2D-30A0A075B6S6 120 aa4.88□□□□□ -1.63
SMCO1-202ENST00000452776 NIPBLQ6KC79 2804 aaeCLIP4.87□□□□□ -1.63
SMCO1-202ENST00000452776 KRTAP9-3Q9BYQ3 159 aa4.87□□□□□ -1.63
SMCO1-202ENST00000452776 NBEAL2Q6ZNJ1 2754 aa4.86□□□□□ -1.63
SMCO1-202ENST00000452776 PANO1I0J062 215 aa4.86□□□□□ -1.63
SMCO1-202ENST00000452776 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.86□□□□□ -1.63
SMCO1-202ENST00000452776 CHTF8P0CG12 524 aa4.86□□□□□ -1.63
SMCO1-202ENST00000452776 KRTAP10-9P60411 292 aa4.85□□□□□ -1.63
SMCO1-202ENST00000452776 KRTAP11-1Q8IUC1 163 aa4.85□□□□□ -1.63
SMCO1-202ENST00000452776 WWC2-AS2Q96NR7 200 aa4.85□□□□□ -1.63
SMCO1-202ENST00000452776 TENM2Q9NT68 2774 aa4.85□□□□□ -1.63
SMCO1-202ENST00000452776 NBEAL1Q6ZS30 2694 aa4.85□□□□□ -1.63
SMCO1-202ENST00000452776 NUPR2A6NF83 97 aa4.84□□□□□ -1.63
SMCO1-202ENST00000452776 P0C880 135 aa4.84□□□□□ -1.63
SMCO1-202ENST00000452776 ANAPC11Q9NYG5 84 aa4.84□□□□□ -1.63
SMCO1-202ENST00000452776 HIVEP2P31629 2446 aa4.84□□□□□ -1.64
SMCO1-202ENST00000452776 KRTAP19-4Q3LI73 84 aa4.83□□□□□ -1.64
SMCO1-202ENST00000452776 A0A1B0GU33 70 aa4.82□□□□□ -1.64
SMCO1-202ENST00000452776 SSBP3-AS1Q7Z2R9 100 aa4.82□□□□□ -1.64
SMCO1-202ENST00000452776 KRTAP16-1A8MUX0 517 aa4.81□□□□□ -1.64
SMCO1-202ENST00000452776 SPINK6Q6UWN8 80 aa4.81□□□□□ -1.64
SMCO1-202ENST00000452776 Q6ZSA8 131 aa4.81□□□□□ -1.64
SMCO1-202ENST00000452776 KRTAP1-1Q07627 177 aa4.81□□□□□ -1.64
SMCO1-202ENST00000452776 CSMD2Q7Z408 3487 aa4.79□□□□□ -1.64
SMCO1-202ENST00000452776 H0YAA0 97 aa4.79□□□□□ -1.64
SMCO1-202ENST00000452776 FBN1P35555 2871 aaKnown RBP4.79□□□□□ -1.64
SMCO1-202ENST00000452776 SPINT4Q6UDR6 99 aa4.79□□□□□ -1.64
SMCO1-202ENST00000452776 ZANQ9Y493 2812 aa4.78□□□□□ -1.64
SMCO1-202ENST00000452776 ATRQ13535 2644 aa4.77□□□□□ -1.65
SMCO1-202ENST00000452776 H1FX-AS1Q4G0G2 97 aa4.77□□□□□ -1.65
SMCO1-202ENST00000452776 C20orf166-AS1Q96NR2 134 aa4.76□□□□□ -1.65
SMCO1-202ENST00000452776 CCDC168Q8NDH2 2452 aa4.74□□□□□ -1.65
SMCO1-202ENST00000452776 SPINK1P00995 79 aa4.72□□□□□ -1.65
SMCO1-202ENST00000452776 SPACA4Q8TDM5 124 aa4.72□□□□□ -1.65
SMCO1-202ENST00000452776 STAB1Q9NY15 2570 aa4.72□□□□□ -1.65
SMCO1-202ENST00000452776 A0A087WTM6 91 aa4.72□□□□□ -1.65
SMCO1-202ENST00000452776 CIRBP-AS1Q8TBR5 109 aa4.72□□□□□ -1.65
SMCO1-202ENST00000452776 PSORS1C2Q9UIG4 136 aa4.72□□□□□ -1.65
SMCO1-202ENST00000452776 COX6B2Q6YFQ2 88 aa4.71□□□□□ -1.66
SMCO1-202ENST00000452776 NDUFAF8A1L188 74 aa4.69□□□□□ -1.66
SMCO1-202ENST00000452776 ANK3Q12955 4377 aaKnown RBP4.69□□□□□ -1.66
SMCO1-202ENST00000452776 COL6A5A8TX70 2615 aa4.69□□□□□ -1.66
SMCO1-202ENST00000452776 KRTAP15-1Q3LI76 137 aa4.69□□□□□ -1.66
SMCO1-202ENST00000452776 KRTAP10-11P60412 298 aa4.68□□□□□ -1.66
SMCO1-202ENST00000452776 UBE2DNLQ8IWF7 75 aa4.67□□□□□ -1.66
SMCO1-202ENST00000452776 DNAH1Q9P2D7 4330 aa4.66□□□□□ -1.66
SMCO1-202ENST00000452776 SONP18583 2426 aaKnown RBP4.65□□□□□ -1.67
SMCO1-202ENST00000452776 RPL37P61927 97 aaKnown RBP4.65□□□□□ -1.67
SMCO1-202ENST00000452776 KRTAP1-5Q9BYS1 174 aa4.65□□□□□ -1.67
SMCO1-202ENST00000452776 ACANP16112 2415 aa4.63□□□□□ -1.67
SMCO1-202ENST00000452776 CRIPTQ9P021 101 aa4.63□□□□□ -1.67
SMCO1-202ENST00000452776 PKD1L1Q8TDX9 2849 aa4.63□□□□□ -1.67
SMCO1-202ENST00000452776 TYMSOSQ8TAI1 123 aa4.62□□□□□ -1.67
SMCO1-202ENST00000452776 Q8N1X5 172 aa4.62□□□□□ -1.67
SMCO1-202ENST00000452776 SRRM2Q9UQ35 2752 aaKnown RBP4.61□□□□□ -1.67
SMCO1-202ENST00000452776 NOTCH1P46531 2555 aa4.61□□□□□ -1.67
SMCO1-202ENST00000452776 NSD1Q96L73 2696 aaPredicted RBP4.59□□□□□ -1.67
SMCO1-202ENST00000452776 NBDYA0A0U1RRE5 68 aa4.58□□□□□ -1.68
SMCO1-202ENST00000452776 CUBNO60494 3623 aa4.58□□□□□ -1.68
SMCO1-202ENST00000452776 TPRXLQ17RH7 258 aa4.58□□□□□ -1.68
SMCO1-202ENST00000452776 APLNQ9ULZ1 77 aa4.58□□□□□ -1.68
SMCO1-202ENST00000452776 ZNF469Q96JG9 3925 aaPredicted RBP4.57□□□□□ -1.68
SMCO1-202ENST00000452776 FLNAP21333 2647 aaKnown RBP4.56□□□□□ -1.68
SMCO1-202ENST00000452776 LUZP6Q538Z0 58 aa4.56□□□□□ -1.68
SMCO1-202ENST00000452776 Q6ZRN7 208 aaPredicted RBP4.56□□□□□ -1.68
SMCO1-202ENST00000452776 TGP01266 2768 aa4.55□□□□□ -1.68
SMCO1-202ENST00000452776 SMR3AQ99954 134 aa4.53□□□□□ -1.68
SMCO1-202ENST00000452776 VWFP04275 2813 aa4.52□□□□□ -1.69
SMCO1-202ENST00000452776 MEGF8Q7Z7M0 2845 aa4.52□□□□□ -1.69
SMCO1-202ENST00000452776 RPS29P62273 56 aaKnown RBP4.49□□□□□ -1.69
SMCO1-202ENST00000452776 ANK2Q01484 3957 aa4.48□□□□□ -1.69
SMCO1-202ENST00000452776 KRTAP24-1Q3LI83 254 aa4.46□□□□□ -1.69
SMCO1-202ENST00000452776 KRTAP13-2Q52LG2 175 aa4.46□□□□□ -1.69
SMCO1-202ENST00000452776 KRTAP3-1Q9BYR8 98 aa4.46□□□□□ -1.69
SMCO1-202ENST00000452776 RYR3Q15413 4870 aa4.46□□□□□ -1.7
SMCO1-202ENST00000452776 FLG2Q5D862 2391 aaPredicted RBP4.45□□□□□ -1.7
SMCO1-202ENST00000452776 TRRAPQ9Y4A5 3859 aa4.45□□□□□ -1.7
SMCO1-202ENST00000452776 KMT2CQ8NEZ4 4911 aaKnown RBP4.43□□□□□ -1.7
SMCO1-202ENST00000452776 C10orf95Q9H7T3 257 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms