RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 CRCT1Q9UGL9 99 aa1.23□□□□□ -2.21
HMGB3P21-201ENST00000452483 CSMD3Q7Z407 3707 aa1.23□□□□□ -2.21
HMGB3P21-201ENST00000452483 M0R2T5 61 aa1.21□□□□□ -2.22
HMGB3P21-201ENST00000452483 NEBP20929 6669 aa1.21□□□□□ -2.22
HMGB3P21-201ENST00000452483 IGSF10Q6WRI0 2623 aa1.2□□□□□ -2.22
HMGB3P21-201ENST00000452483 AHNAK2Q8IVF2 5795 aa1.2□□□□□ -2.22
HMGB3P21-201ENST00000452483 ZFYVE26Q68DK2 2539 aa1.2□□□□□ -2.22
HMGB3P21-201ENST00000452483 A8MTW9 85 aa1.2□□□□□ -2.22
HMGB3P21-201ENST00000452483 TOMM7Q9P0U1 55 aa1.2□□□□□ -2.22
HMGB3P21-201ENST00000452483 ANK2Q01484 3957 aa1.2□□□□□ -2.22
HMGB3P21-201ENST00000452483 HIVEP3Q5T1R4 2406 aa1.19□□□□□ -2.22
HMGB3P21-201ENST00000452483 FLNCQ14315 2725 aa1.19□□□□□ -2.22
HMGB3P21-201ENST00000452483 PDZD2O15018 2839 aa1.19□□□□□ -2.22
HMGB3P21-201ENST00000452483 ZFHX4Q86UP3 3567 aa1.19□□□□□ -2.22
HMGB3P21-201ENST00000452483 MAP1BP46821 2468 aaKnown RBP1.19□□□□□ -2.22
HMGB3P21-201ENST00000452483 SMR3AQ99954 134 aa1.19□□□□□ -2.22
HMGB3P21-201ENST00000452483 TENM1Q9UKZ4 2725 aa1.19□□□□□ -2.22
HMGB3P21-201ENST00000452483 KMT2CQ8NEZ4 4911 aaKnown RBP1.19□□□□□ -2.22
HMGB3P21-201ENST00000452483 SPG11Q96JI7 2443 aa1.19□□□□□ -2.22
HMGB3P21-201ENST00000452483 RYR2Q92736 4967 aa1.18□□□□□ -2.22
HMGB3P21-201ENST00000452483 CREBBPQ92793 2442 aa1.18□□□□□ -2.22
HMGB3P21-201ENST00000452483 NSD1Q96L73 2696 aaPredicted RBP1.18□□□□□ -2.22
HMGB3P21-201ENST00000452483 ATRQ13535 2644 aa1.18□□□□□ -2.22
HMGB3P21-201ENST00000452483 FSIP2Q5CZC0 6907 aa1.17□□□□□ -2.22
HMGB3P21-201ENST00000452483 SPTA1P02549 2419 aa1.17□□□□□ -2.22
HMGB3P21-201ENST00000452483 LAMA2P24043 3122 aaKnown RBP1.17□□□□□ -2.22
HMGB3P21-201ENST00000452483 LINC01590Q5TEZ4 76 aa1.17□□□□□ -2.22
HMGB3P21-201ENST00000452483 DSTQ03001 7570 aaKnown RBP1.17□□□□□ -2.22
HMGB3P21-201ENST00000452483 SZT2Q5T011 3432 aa1.17□□□□□ -2.22
HMGB3P21-201ENST00000452483 USP9YO00507 2555 aaPredicted RBP1.17□□□□□ -2.22
HMGB3P21-201ENST00000452483 PRRC2CQ9Y520 2896 aaKnown RBP1.17□□□□□ -2.22
HMGB3P21-201ENST00000452483 CEP290O15078 2479 aa1.16□□□□□ -2.22
HMGB3P21-201ENST00000452483 UTRNP46939 3433 aa1.16□□□□□ -2.22
HMGB3P21-201ENST00000452483 FLNAP21333 2647 aaKnown RBP1.15□□□□□ -2.23
HMGB3P21-201ENST00000452483 PKD1L1Q8TDX9 2849 aa1.15□□□□□ -2.23
HMGB3P21-201ENST00000452483 CELSR1Q9NYQ6 3014 aa1.15□□□□□ -2.23
HMGB3P21-201ENST00000452483 H3BSH0 61 aa1.15□□□□□ -2.23
HMGB3P21-201ENST00000452483 U3KQA8 63 aa1.15□□□□□ -2.23
HMGB3P21-201ENST00000452483 RYR3Q15413 4870 aa1.15□□□□□ -2.23
HMGB3P21-201ENST00000452483 AKAP13Q12802 2813 aa1.15□□□□□ -2.23
HMGB3P21-201ENST00000452483 VCANP13611 3396 aa1.14□□□□□ -2.23
HMGB3P21-201ENST00000452483 FBN2P35556 2912 aa1.14□□□□□ -2.23
HMGB3P21-201ENST00000452483 EYSQ5T1H1 3165 aa1.13□□□□□ -2.23
HMGB3P21-201ENST00000452483 M0QZ58 72 aa1.13□□□□□ -2.23
HMGB3P21-201ENST00000452483 PRCDQ00LT1 54 aa1.13□□□□□ -2.23
HMGB3P21-201ENST00000452483 BSNQ9UPA5 3926 aa1.13□□□□□ -2.23
HMGB3P21-201ENST00000452483 UBR5O95071 2799 aaPredicted RBP1.13□□□□□ -2.23
HMGB3P21-201ENST00000452483 ITPR1Q14643 2758 aa1.13□□□□□ -2.23
HMGB3P21-201ENST00000452483 EP300Q09472 2414 aaPredicted RBP1.13□□□□□ -2.23
HMGB3P21-201ENST00000452483 EP400Q96L91 3159 aa1.12□□□□□ -2.23
HMGB3P21-201ENST00000452483 ABCA13Q86UQ4 5058 aa1.12□□□□□ -2.23
HMGB3P21-201ENST00000452483 EPPK1P58107 5090 aaKnown RBP1.11□□□□□ -2.23
HMGB3P21-201ENST00000452483 NBEAL1Q6ZS30 2694 aa1.11□□□□□ -2.23
HMGB3P21-201ENST00000452483 ZANQ9Y493 2812 aa1.11□□□□□ -2.23
HMGB3P21-201ENST00000452483 SPTBN5Q9NRC6 3674 aaKnown RBP1.11□□□□□ -2.23
HMGB3P21-201ENST00000452483 KRTAP2-3P0C7H8 128 aa1.11□□□□□ -2.23
HMGB3P21-201ENST00000452483 KRTAP2-4Q9BYR9 128 aa1.11□□□□□ -2.23
HMGB3P21-201ENST00000452483 KRTAP2-1Q9BYU5 128 aa1.11□□□□□ -2.23
HMGB3P21-201ENST00000452483 SONP18583 2426 aaKnown RBP1.11□□□□□ -2.23
HMGB3P21-201ENST00000452483 MUC5BQ9HC84 5762 aaPredicted RBP1.11□□□□□ -2.23
HMGB3P21-201ENST00000452483 CFAP47Q6ZTR5 3102 aa1.11□□□□□ -2.23
HMGB3P21-201ENST00000452483 FRAS1Q86XX4 4008 aa1.11□□□□□ -2.23
HMGB3P21-201ENST00000452483 CEP295Q9C0D2 2601 aa1.1□□□□□ -2.23
HMGB3P21-201ENST00000452483 KRTAP19-3Q7Z4W3 81 aa1.1□□□□□ -2.23
HMGB3P21-201ENST00000452483 CFAP46Q8IYW2 2715 aa1.1□□□□□ -2.23
HMGB3P21-201ENST00000452483 SRRM2Q9UQ35 2752 aaKnown RBP1.1□□□□□ -2.23
HMGB3P21-201ENST00000452483 UNC80Q8N2C7 3258 aa1.09□□□□□ -2.23
HMGB3P21-201ENST00000452483 UTP20O75691 2785 aaKnown RBP1.09□□□□□ -2.23
HMGB3P21-201ENST00000452483 HYDINQ4G0P3 5121 aa1.09□□□□□ -2.23
HMGB3P21-201ENST00000452483 DNHD1Q96M86 4753 aa1.09□□□□□ -2.23
HMGB3P21-201ENST00000452483 BIRC6Q9NR09 4857 aa1.09□□□□□ -2.23
HMGB3P21-201ENST00000452483 BOD1L1Q8NFC6 3051 aa1.09□□□□□ -2.23
HMGB3P21-201ENST00000452483 MUC3AQ02505 3323 aa1.08□□□□□ -2.24
HMGB3P21-201ENST00000452483 DEFB104AQ8WTQ1 72 aa1.08□□□□□ -2.24
HMGB3P21-201ENST00000452483 C9orf92A6NGG3 77 aa1.07□□□□□ -2.24
HMGB3P21-201ENST00000452483 KRTAP4-1Q9BYQ7 146 aa1.07□□□□□ -2.24
HMGB3P21-201ENST00000452483 GOLGB1Q14789 3259 aaKnown RBP1.07□□□□□ -2.24
HMGB3P21-201ENST00000452483 PRKDCP78527 4128 aaKnown RBP1.06□□□□□ -2.24
HMGB3P21-201ENST00000452483 APCP25054 2843 aa1.06□□□□□ -2.24
HMGB3P21-201ENST00000452483 HERC1Q15751 4861 aa1.06□□□□□ -2.24
HMGB3P21-201ENST00000452483 OTOGQ6ZRI0 2925 aa1.06□□□□□ -2.24
HMGB3P21-201ENST00000452483 ZNF469Q96JG9 3925 aaPredicted RBP1.06□□□□□ -2.24
HMGB3P21-201ENST00000452483 RANBP2P49792 3224 aaKnown RBP1.06□□□□□ -2.24
HMGB3P21-201ENST00000452483 FCGBPQ9Y6R7 5405 aaPredicted RBP1.06□□□□□ -2.24
HMGB3P21-201ENST00000452483 ACACBO00763 2458 aa1.05□□□□□ -2.24
HMGB3P21-201ENST00000452483 H3BNG1 76 aa1.05□□□□□ -2.24
HMGB3P21-201ENST00000452483 DNAH12Q6ZR08 3092 aa1.05□□□□□ -2.24
HMGB3P21-201ENST00000452483 PRM1P04553 51 aa1.04□□□□□ -2.24
HMGB3P21-201ENST00000452483 TNP1P09430 55 aa1.04□□□□□ -2.24
HMGB3P21-201ENST00000452483 STAB2Q8WWQ8 2551 aa1.04□□□□□ -2.24
HMGB3P21-201ENST00000452483 TENM2Q9NT68 2774 aa1.04□□□□□ -2.24
HMGB3P21-201ENST00000452483 FAT2Q9NYQ8 4349 aa1.04□□□□□ -2.24
HMGB3P21-201ENST00000452483 SSPOA2VEC9 5147 aa1.03□□□□□ -2.24
HMGB3P21-201ENST00000452483 SPTAN1Q13813 2472 aaKnown RBP1.03□□□□□ -2.24
HMGB3P21-201ENST00000452483 KMT2DO14686 5537 aa1.02□□□□□ -2.25
HMGB3P21-201ENST00000452483 CSMD1Q96PZ7 3565 aa1.02□□□□□ -2.25
HMGB3P21-201ENST00000452483 LYSTQ99698 3801 aa1.02□□□□□ -2.25
HMGB3P21-201ENST00000452483 NBASA2RRP1 2371 aa1.02□□□□□ -2.25
HMGB3P21-201ENST00000452483 FAT4Q6V0I7 4981 aa1.02□□□□□ -2.25
HMGB3P21-201ENST00000452483 TNXBP22105 4242 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms