RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 AKAP9Q99996 3911 aa2.84□□□□□ -1.95
EPHA3-202ENST00000452448 ANGP03950 147 aaKnown RBP2.84□□□□□ -1.96
EPHA3-202ENST00000452448 PRO0255Q9UI72 69 aa2.84□□□□□ -1.96
EPHA3-202ENST00000452448 NSD1Q96L73 2696 aaPredicted RBP2.84□□□□□ -1.96
EPHA3-202ENST00000452448 HRNRQ86YZ3 2850 aaPredicted RBP2.84□□□□□ -1.96
EPHA3-202ENST00000452448 PSORS1C2Q9UIG4 136 aa2.83□□□□□ -1.96
EPHA3-202ENST00000452448 CENPEQ02224 2701 aa2.83□□□□□ -1.96
EPHA3-202ENST00000452448 NBEAL1Q6ZS30 2694 aa2.83□□□□□ -1.96
EPHA3-202ENST00000452448 CELSR2Q9HCU4 2923 aa2.82□□□□□ -1.96
EPHA3-202ENST00000452448 DEFB130BP0DP73 79 aa2.82□□□□□ -1.96
EPHA3-202ENST00000452448 DEFB130AP0DP74 79 aa2.82□□□□□ -1.96
EPHA3-202ENST00000452448 UTP20O75691 2785 aaKnown RBP2.82□□□□□ -1.96
EPHA3-202ENST00000452448 ATMQ13315 3056 aa2.81□□□□□ -1.96
EPHA3-202ENST00000452448 GVQW2A0A096LPI5 108 aaPredicted RBP2.81□□□□□ -1.96
EPHA3-202ENST00000452448 TP53AIP1Q9HCN2 124 aa2.81□□□□□ -1.96
EPHA3-202ENST00000452448 TPRXLQ17RH7 258 aa2.81□□□□□ -1.96
EPHA3-202ENST00000452448 ACANP16112 2415 aa2.81□□□□□ -1.96
EPHA3-202ENST00000452448 NIPBLQ6KC79 2804 aaeCLIP2.81□□□□□ -1.96
EPHA3-202ENST00000452448 LCE5AQ5TCM9 118 aa2.8□□□□□ -1.96
EPHA3-202ENST00000452448 PRO2289Q9P1D8 64 aa2.8□□□□□ -1.96
EPHA3-202ENST00000452448 DCHS2Q6V1P9 2916 aa2.8□□□□□ -1.96
EPHA3-202ENST00000452448 A0A0G2JQZ4 141 aa2.8□□□□□ -1.96
EPHA3-202ENST00000452448 DEFB105AQ8NG35 78 aa2.8□□□□□ -1.96
EPHA3-202ENST00000452448 LELP1Q5T871 98 aa2.79□□□□□ -1.96
EPHA3-202ENST00000452448 CLPSL2Q6UWE3 100 aa2.79□□□□□ -1.96
EPHA3-202ENST00000452448 KRTAP4-11Q9BYQ6 195 aa2.79□□□□□ -1.96
EPHA3-202ENST00000452448 R4GN34 69 aa2.79□□□□□ -1.96
EPHA3-202ENST00000452448 CSMD1Q96PZ7 3565 aa2.79□□□□□ -1.96
EPHA3-202ENST00000452448 Q6ZRX8 168 aa2.79□□□□□ -1.96
EPHA3-202ENST00000452448 ALMS1Q8TCU4 4167 aa2.79□□□□□ -1.96
EPHA3-202ENST00000452448 AKAP6Q13023 2319 aa2.79□□□□□ -1.96
EPHA3-202ENST00000452448 LY6G6CO95867 125 aa2.78□□□□□ -1.96
EPHA3-202ENST00000452448 TACC2O95359 2948 aa2.78□□□□□ -1.96
EPHA3-202ENST00000452448 LAMA5O15230 3695 aa2.78□□□□□ -1.96
EPHA3-202ENST00000452448 FLG2Q5D862 2391 aaPredicted RBP2.78□□□□□ -1.96
EPHA3-202ENST00000452448 ANK2Q01484 3957 aa2.78□□□□□ -1.96
EPHA3-202ENST00000452448 SPACA4Q8TDM5 124 aa2.78□□□□□ -1.96
EPHA3-202ENST00000452448 COL12A1Q99715 3063 aa2.78□□□□□ -1.97
EPHA3-202ENST00000452448 H0YAA0 97 aa2.77□□□□□ -1.97
EPHA3-202ENST00000452448 UNQ6190/PRO20217Q6UXQ8 127 aa2.77□□□□□ -1.97
EPHA3-202ENST00000452448 BIRC6Q9NR09 4857 aa2.77□□□□□ -1.97
EPHA3-202ENST00000452448 SPART-AS1P0CW21 52 aa2.77□□□□□ -1.97
EPHA3-202ENST00000452448 FLNAP21333 2647 aaKnown RBP2.77□□□□□ -1.97
EPHA3-202ENST00000452448 RELNP78509 3460 aa2.76□□□□□ -1.97
EPHA3-202ENST00000452448 A0A096LPF7 62 aa2.76□□□□□ -1.97
EPHA3-202ENST00000452448 H3BNG1 76 aa2.76□□□□□ -1.97
EPHA3-202ENST00000452448 MMP24-AS1A0A0U1RRL7 71 aa2.75□□□□□ -1.97
EPHA3-202ENST00000452448 C14orf177Q52M58 125 aa2.75□□□□□ -1.97
EPHA3-202ENST00000452448 DEFB135Q30KP9 77 aa2.74□□□□□ -1.97
EPHA3-202ENST00000452448 MXRA5Q9NR99 2828 aa2.74□□□□□ -1.97
EPHA3-202ENST00000452448 ANAPC11Q9NYG5 84 aa2.73□□□□□ -1.97
EPHA3-202ENST00000452448 HTN3P15516 51 aa2.72□□□□□ -1.97
EPHA3-202ENST00000452448 KRTAP10-3P60369 221 aa2.72□□□□□ -1.97
EPHA3-202ENST00000452448 C10orf95Q9H7T3 257 aa2.72□□□□□ -1.97
EPHA3-202ENST00000452448 IGKV2-30P06310 120 aa2.72□□□□□ -1.97
EPHA3-202ENST00000452448 MEGF8Q7Z7M0 2845 aa2.72□□□□□ -1.97
EPHA3-202ENST00000452448 DEFB4AO15263 64 aa2.71□□□□□ -1.98
EPHA3-202ENST00000452448 Q6ZSA8 131 aa2.71□□□□□ -1.98
EPHA3-202ENST00000452448 CELSR1Q9NYQ6 3014 aa2.71□□□□□ -1.98
EPHA3-202ENST00000452448 SVEP1Q4LDE5 3571 aa2.71□□□□□ -1.98
EPHA3-202ENST00000452448 NOTCH1P46531 2555 aa2.71□□□□□ -1.98
EPHA3-202ENST00000452448 WNK1Q9H4A3 2382 aa2.7□□□□□ -1.98
EPHA3-202ENST00000452448 TLN2Q9Y4G6 2542 aa2.7□□□□□ -1.98
EPHA3-202ENST00000452448 LINC01556Q5JQF7 62 aa2.7□□□□□ -1.98
EPHA3-202ENST00000452448 CRYBG3Q68DQ2 2970 aa2.7□□□□□ -1.98
EPHA3-202ENST00000452448 IGFL1Q6UW32 110 aa2.7□□□□□ -1.98
EPHA3-202ENST00000452448 SONP18583 2426 aaKnown RBP2.69□□□□□ -1.98
EPHA3-202ENST00000452448 SPRR1AP35321 89 aa2.68□□□□□ -1.98
EPHA3-202ENST00000452448 MRPL34Q9BQ48 92 aaKnown RBP2.68□□□□□ -1.98
EPHA3-202ENST00000452448 PLAC4Q8WY50 150 aa2.67□□□□□ -1.98
EPHA3-202ENST00000452448 MGAM2Q2M2H8 2515 aa2.66□□□□□ -1.98
EPHA3-202ENST00000452448 VPS13CQ709C8 3753 aa2.66□□□□□ -1.98
EPHA3-202ENST00000452448 KRTAP10-8P60410 259 aa2.65□□□□□ -1.99
EPHA3-202ENST00000452448 NOTCH3Q9UM47 2321 aa2.65□□□□□ -1.99
EPHA3-202ENST00000452448 ANK3Q12955 4377 aaKnown RBP2.65□□□□□ -1.99
EPHA3-202ENST00000452448 PKD1L1Q8TDX9 2849 aa2.64□□□□□ -1.99
EPHA3-202ENST00000452448 K7EIL1 84 aa2.64□□□□□ -1.99
EPHA3-202ENST00000452448 H1FX-AS1Q4G0G2 97 aa2.64□□□□□ -1.99
EPHA3-202ENST00000452448 KRTAP7-1Q8IUC3 87 aa2.64□□□□□ -1.99
EPHA3-202ENST00000452448 IGKV2D-30A0A075B6S6 120 aa2.63□□□□□ -1.99
EPHA3-202ENST00000452448 RYR3Q15413 4870 aa2.63□□□□□ -1.99
EPHA3-202ENST00000452448 DYNC2H1Q8NCM8 4307 aaKnown RBP2.62□□□□□ -1.99
EPHA3-202ENST00000452448 KRTAP13-3Q3SY46 172 aa2.61□□□□□ -1.99
EPHA3-202ENST00000452448 KRTAP10-11P60412 298 aa2.61□□□□□ -1.99
EPHA3-202ENST00000452448 SPRR1BP22528 89 aa2.6□□□□□ -1.99
EPHA3-202ENST00000452448 TGP01266 2768 aa2.6□□□□□ -1.99
EPHA3-202ENST00000452448 PRLHP81277 87 aa2.6□□□□□ -1.99
EPHA3-202ENST00000452448 ZANQ9Y493 2812 aa2.59□□□□□ -1.99
EPHA3-202ENST00000452448 HERC2O95714 4834 aa2.59□□□□□ -1.99
EPHA3-202ENST00000452448 SPINK1P00995 79 aa2.59□□□□□ -2
EPHA3-202ENST00000452448 Q6ZRN7 208 aaPredicted RBP2.59□□□□□ -2
EPHA3-202ENST00000452448 INE1O15225 51 aa2.58□□□□□ -2
EPHA3-202ENST00000452448 MAP1AP78559 2803 aaPredicted RBP2.58□□□□□ -2
EPHA3-202ENST00000452448 NBEAL2Q6ZNJ1 2754 aa2.58□□□□□ -2
EPHA3-202ENST00000452448 CSMD2Q7Z408 3487 aa2.58□□□□□ -2
EPHA3-202ENST00000452448 RPL37P61927 97 aaKnown RBP2.58□□□□□ -2
EPHA3-202ENST00000452448 DNAH1Q9P2D7 4330 aa2.57□□□□□ -2
EPHA3-202ENST00000452448 UBE2DNLQ8IWF7 75 aa2.57□□□□□ -2
EPHA3-202ENST00000452448 A0A096LNI7 61 aa2.56□□□□□ -2
EPHA3-202ENST00000452448 COX6B2Q6YFQ2 88 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms