RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 RPS29P62273 56 aaKnown RBP5.1□□□□□ -1.59
COL8A1-203ENST00000452013 KLKP1Q107X0 134 aa5.1□□□□□ -1.59
COL8A1-203ENST00000452013 SMIM29Q86T20 159 aa5.1□□□□□ -1.59
COL8A1-203ENST00000452013 Q8N377 158 aa5.1□□□□□ -1.59
COL8A1-203ENST00000452013 HMCN2Q8NDA2 5059 aa5.1□□□□□ -1.59
COL8A1-203ENST00000452013 F8WEM9 126 aa5.09□□□□□ -1.59
COL8A1-203ENST00000452013 RETNLBQ9BQ08 111 aa5.08□□□□□ -1.6
COL8A1-203ENST00000452013 IGLV7-46A0A075B6I9 117 aa5.07□□□□□ -1.6
COL8A1-203ENST00000452013 BPY2O14599 106 aa5.07□□□□□ -1.6
COL8A1-203ENST00000452013 CD164Q04900 197 aa5.07□□□□□ -1.6
COL8A1-203ENST00000452013 FP248Q71RG6 208 aaPredicted RBP5.07□□□□□ -1.6
COL8A1-203ENST00000452013 LIMD2Q9BT23 127 aa5.06□□□□□ -1.6
COL8A1-203ENST00000452013 HRCT1Q6UXD1 115 aa5.05□□□□□ -1.6
COL8A1-203ENST00000452013 C20orf197Q8N268 126 aa5.05□□□□□ -1.6
COL8A1-203ENST00000452013 IGLV8-61A0A075B6I0 122 aa5.04□□□□□ -1.6
COL8A1-203ENST00000452013 FAM236DA0A1B0GTK5 79 aa5.04□□□□□ -1.6
COL8A1-203ENST00000452013 FAM236CP0DP71 79 aa5.04□□□□□ -1.6
COL8A1-203ENST00000452013 IGKV4-1P06312 121 aa5.03□□□□□ -1.6
COL8A1-203ENST00000452013 H7BZZ5 65 aa5.02□□□□□ -1.61
COL8A1-203ENST00000452013 TPRXLQ17RH7 258 aa5.02□□□□□ -1.61
COL8A1-203ENST00000452013 SERP1Q9Y6X1 66 aa5.02□□□□□ -1.61
COL8A1-203ENST00000452013 Q5XG85 94 aa5.01□□□□□ -1.61
COL8A1-203ENST00000452013 LOC100996750A0A140TA64 210 aa5□□□□□ -1.61
COL8A1-203ENST00000452013 A0A1W2PNM2 257 aa5□□□□□ -1.61
COL8A1-203ENST00000452013 KRTAP4-6Q9BYQ5 205 aa5□□□□□ -1.61
COL8A1-203ENST00000452013 OCR1Q9BZK8 76 aa5□□□□□ -1.61
COL8A1-203ENST00000452013 A0A0G2JQZ4 141 aa4.99□□□□□ -1.61
COL8A1-203ENST00000452013 IGFL1Q6UW32 110 aa4.99□□□□□ -1.61
COL8A1-203ENST00000452013 TMEM254Q8TBM7 123 aa4.99□□□□□ -1.61
COL8A1-203ENST00000452013 CYSTM1Q9H1C7 97 aa4.98□□□□□ -1.61
COL8A1-203ENST00000452013 C5orf47Q569G3 176 aa4.97□□□□□ -1.61
COL8A1-203ENST00000452013 A0A0U1RQV1 116 aa4.96□□□□□ -1.62
COL8A1-203ENST00000452013 KRTAP13-3Q3SY46 172 aa4.96□□□□□ -1.62
COL8A1-203ENST00000452013 SMIM26A0A096LP01 95 aa4.95□□□□□ -1.62
COL8A1-203ENST00000452013 C1orf195Q5TG92 126 aa4.95□□□□□ -1.62
COL8A1-203ENST00000452013 HCG22E2RYF7 251 aa4.94□□□□□ -1.62
COL8A1-203ENST00000452013 H3BPC8 53 aa4.94□□□□□ -1.62
COL8A1-203ENST00000452013 NDUFB1O75438 58 aa4.94□□□□□ -1.62
COL8A1-203ENST00000452013 ASB16-AS1Q495Z4 193 aa4.94□□□□□ -1.62
COL8A1-203ENST00000452013 LPAP08519 4548 aa4.93□□□□□ -1.62
COL8A1-203ENST00000452013 LRP2P98164 4655 aa4.93□□□□□ -1.62
COL8A1-203ENST00000452013 DSCR10P59022 87 aa4.93□□□□□ -1.62
COL8A1-203ENST00000452013 SNURFQ9Y675 71 aa4.93□□□□□ -1.62
COL8A1-203ENST00000452013 UBR4Q5T4S7 5183 aa4.92□□□□□ -1.62
COL8A1-203ENST00000452013 Q8N9L7 120 aa4.91□□□□□ -1.62
COL8A1-203ENST00000452013 SEC61BP60468 96 aaKnown RBP4.9□□□□□ -1.63
COL8A1-203ENST00000452013 A0A087WSZ3 146 aa4.89□□□□□ -1.63
COL8A1-203ENST00000452013 K7EQZ3 153 aa4.89□□□□□ -1.63
COL8A1-203ENST00000452013 MP68P56378 58 aa4.89□□□□□ -1.63
COL8A1-203ENST00000452013 XP32Q5T750 250 aa4.89□□□□□ -1.63
COL8A1-203ENST00000452013 C9orf92A6NGG3 77 aa4.88□□□□□ -1.63
COL8A1-203ENST00000452013 A8MWP4 228 aa4.88□□□□□ -1.63
COL8A1-203ENST00000452013 PRR15Q8IV56 129 aa4.88□□□□□ -1.63
COL8A1-203ENST00000452013 ZCCHC13Q8WW36 166 aaKnown RBP4.88□□□□□ -1.63
COL8A1-203ENST00000452013 hDV103S1A0JD37 113 aa4.87□□□□□ -1.63
COL8A1-203ENST00000452013 CYP4F30PQ9H0H9 118 aa4.86□□□□□ -1.63
COL8A1-203ENST00000452013 LINC00472Q9H8W2 130 aa4.86□□□□□ -1.63
COL8A1-203ENST00000452013 SPANXA2-OT1Q8N9U9 137 aa4.85□□□□□ -1.63
COL8A1-203ENST00000452013 TP53AIP1Q9HCN2 124 aa4.85□□□□□ -1.63
COL8A1-203ENST00000452013 CASC2Q6XLA1 102 aa4.84□□□□□ -1.63
COL8A1-203ENST00000452013 TRAV22A0A0B4J277 110 aa4.81□□□□□ -1.64
COL8A1-203ENST00000452013 Q96NJ1 140 aa4.81□□□□□ -1.64
COL8A1-203ENST00000452013 V9GYY9 64 aa4.81□□□□□ -1.64
COL8A1-203ENST00000452013 MUC17Q685J3 4493 aa4.8□□□□□ -1.64
COL8A1-203ENST00000452013 RPL37P61927 97 aaKnown RBP4.8□□□□□ -1.64
COL8A1-203ENST00000452013 C4orf26Q17RF5 130 aa4.8□□□□□ -1.64
COL8A1-203ENST00000452013 PCOTHQ58A44 107 aa4.79□□□□□ -1.64
COL8A1-203ENST00000452013 WFDC13Q8IUB5 93 aa4.79□□□□□ -1.64
COL8A1-203ENST00000452013 RNF213Q63HN8 5207 aa4.79□□□□□ -1.64
COL8A1-203ENST00000452013 H0Y9P7 68 aa4.78□□□□□ -1.64
COL8A1-203ENST00000452013 DEFB116Q30KQ4 102 aa4.78□□□□□ -1.64
COL8A1-203ENST00000452013 MMP24-AS1A0A0U1RRL7 71 aa4.77□□□□□ -1.65
COL8A1-203ENST00000452013 LINC00313P59037 77 aa4.77□□□□□ -1.65
COL8A1-203ENST00000452013 Q1T7F1 81 aa4.77□□□□□ -1.65
COL8A1-203ENST00000452013 ATP11AUNQ6ZP68 121 aa4.77□□□□□ -1.65
COL8A1-203ENST00000452013 PRO0628Q9UI54 55 aa4.77□□□□□ -1.65
COL8A1-203ENST00000452013 LCE2BO14633 110 aa4.76□□□□□ -1.65
COL8A1-203ENST00000452013 Q75L30 129 aa4.76□□□□□ -1.65
COL8A1-203ENST00000452013 LINC00208Q96KT6 92 aa4.76□□□□□ -1.65
COL8A1-203ENST00000452013 A0A1B0GVX0 72 aa4.75□□□□□ -1.65
COL8A1-203ENST00000452013 C1orf64Q8NEQ6 169 aa4.75□□□□□ -1.65
COL8A1-203ENST00000452013 KRTAP4-1Q9BYQ7 146 aa4.74□□□□□ -1.65
COL8A1-203ENST00000452013 C8orf17Q9NRJ1 99 aa4.74□□□□□ -1.65
COL8A1-203ENST00000452013 IGHV6-1A0A0B4J1U7 121 aa4.73□□□□□ -1.65
COL8A1-203ENST00000452013 C8orf87E5RJ46 101 aa4.73□□□□□ -1.65
COL8A1-203ENST00000452013 C20orf166-AS1Q96NR2 134 aa4.73□□□□□ -1.65
COL8A1-203ENST00000452013 A8MUU9 505 aa4.72□□□□□ -1.65
COL8A1-203ENST00000452013 MRPL34Q9BQ48 92 aaKnown RBP4.72□□□□□ -1.65
COL8A1-203ENST00000452013 MUC2Q02817 5179 aa4.71□□□□□ -1.65
COL8A1-203ENST00000452013 LOC101927531A0A1B0GV80 90 aa4.69□□□□□ -1.66
COL8A1-203ENST00000452013 NOTCH2NLQ7Z3S9 236 aa4.69□□□□□ -1.66
COL8A1-203ENST00000452013 KRTAP16-1A8MUX0 517 aa4.68□□□□□ -1.66
COL8A1-203ENST00000452013 MPLKIPQ8TAP9 179 aa4.68□□□□□ -1.66
COL8A1-203ENST00000452013 NDUFS5O43920 106 aa4.64□□□□□ -1.67
COL8A1-203ENST00000452013 LCE2AQ5TA79 106 aaPredicted RBP4.63□□□□□ -1.67
COL8A1-203ENST00000452013 BRK1Q8WUW1 75 aa4.63□□□□□ -1.67
COL8A1-203ENST00000452013 COX6B2Q6YFQ2 88 aa4.62□□□□□ -1.67
COL8A1-203ENST00000452013 Q8N9P0 234 aaPredicted RBP4.62□□□□□ -1.67
COL8A1-203ENST00000452013 COA5Q86WW8 74 aa4.61□□□□□ -1.67
COL8A1-203ENST00000452013 LCE2CQ5TA81 110 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms