RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 TRBV20-1A0A075B6N2 111 aa6.23□□□□□ -1.41
MSH5-209ENST00000450148 MPLKIPQ8TAP9 179 aa6.23□□□□□ -1.41
MSH5-209ENST00000450148 HRES1P13985 223 aa6.22□□□□□ -1.41
MSH5-209ENST00000450148 RBM3P98179 157 aaKnown RBP6.22□□□□□ -1.41
MSH5-209ENST00000450148 IGHV6-1A0A0B4J1U7 121 aa6.21□□□□□ -1.42
MSH5-209ENST00000450148 SCGB1C2P0DMR2 95 aa6.21□□□□□ -1.42
MSH5-209ENST00000450148 K7EP34 96 aa6.2□□□□□ -1.42
MSH5-209ENST00000450148 NAA38Q9BRA0 125 aaKnown RBP6.2□□□□□ -1.42
MSH5-209ENST00000450148 A0A1B0GVX0 72 aa6.19□□□□□ -1.42
MSH5-209ENST00000450148 A0A1W2PPM0 123 aa6.19□□□□□ -1.42
MSH5-209ENST00000450148 BAALC-AS2P0C853 105 aa6.19□□□□□ -1.42
MSH5-209ENST00000450148 VPS25Q9BRG1 176 aa6.19□□□□□ -1.42
MSH5-209ENST00000450148 C8orf87E5RJ46 101 aa6.18□□□□□ -1.42
MSH5-209ENST00000450148 DSCR8Q96T75 97 aa6.18□□□□□ -1.42
MSH5-209ENST00000450148 C9JAW5 83 aa6.16□□□□□ -1.42
MSH5-209ENST00000450148 Q6ZQT0 140 aa6.16□□□□□ -1.42
MSH5-209ENST00000450148 MT2AP02795 61 aa6.14□□□□□ -1.43
MSH5-209ENST00000450148 GTF2H5Q6ZYL4 71 aa6.14□□□□□ -1.43
MSH5-209ENST00000450148 SPCS1Q9Y6A9 102 aa6.14□□□□□ -1.43
MSH5-209ENST00000450148 FAM236DA0A1B0GTK5 79 aa6.13□□□□□ -1.43
MSH5-209ENST00000450148 J3KT08 172 aa6.13□□□□□ -1.43
MSH5-209ENST00000450148 FAM236CP0DP71 79 aa6.13□□□□□ -1.43
MSH5-209ENST00000450148 C21orf62-AS1Q17RA5 79 aa6.13□□□□□ -1.43
MSH5-209ENST00000450148 ZCCHC13Q8WW36 166 aaKnown RBP6.12□□□□□ -1.43
MSH5-209ENST00000450148 RBM12B-AS1Q9P1G2 102 aa6.12□□□□□ -1.43
MSH5-209ENST00000450148 PRO0461Q9UI25 63 aa6.12□□□□□ -1.43
MSH5-209ENST00000450148 LOC110117498A0A087WWA1 95 aa6.11□□□□□ -1.43
MSH5-209ENST00000450148 ATXN8Q156A1 80 aa6.11□□□□□ -1.43
MSH5-209ENST00000450148 Q8N9P0 234 aaPredicted RBP6.11□□□□□ -1.43
MSH5-209ENST00000450148 JMJD7-PLA2G4BH0Y9G9 81 aa6.1□□□□□ -1.43
MSH5-209ENST00000450148 MT1FP04733 61 aa6.1□□□□□ -1.43
MSH5-209ENST00000450148 A0A1B0GW54 56 aa6.09□□□□□ -1.43
MSH5-209ENST00000450148 C8orf17Q9NRJ1 99 aa6.08□□□□□ -1.44
MSH5-209ENST00000450148 IGKV3D-7A0A0C4DH55 119 aa6.07□□□□□ -1.44
MSH5-209ENST00000450148 A8MWP4 228 aa6.07□□□□□ -1.44
MSH5-209ENST00000450148 SPINK7P58062 85 aa6.07□□□□□ -1.44
MSH5-209ENST00000450148 NDUFB1O75438 58 aa6.06□□□□□ -1.44
MSH5-209ENST00000450148 SMCPP49901 116 aaPredicted RBP6.06□□□□□ -1.44
MSH5-209ENST00000450148 KRTAP9-3Q9BYQ3 159 aa6.06□□□□□ -1.44
MSH5-209ENST00000450148 C14orf132Q9NPU4 83 aa6.06□□□□□ -1.44
MSH5-209ENST00000450148 USH2AO75445 5202 aa6.05□□□□□ -1.44
MSH5-209ENST00000450148 LCE2BO14633 110 aa6.05□□□□□ -1.44
MSH5-209ENST00000450148 PDE6GP18545 87 aa6.05□□□□□ -1.44
MSH5-209ENST00000450148 F8W1H4 67 aa6.03□□□□□ -1.44
MSH5-209ENST00000450148 LYRM7Q5U5X0 104 aa6.02□□□□□ -1.45
MSH5-209ENST00000450148 PRR15Q8IV56 129 aa6.02□□□□□ -1.45
MSH5-209ENST00000450148 K7ERU9 68 aa6.01□□□□□ -1.45
MSH5-209ENST00000450148 Q6ZVQ6 151 aa6.01□□□□□ -1.45
MSH5-209ENST00000450148 MTURNQ8N3F0 131 aa6.01□□□□□ -1.45
MSH5-209ENST00000450148 SSPOA2VEC9 5147 aa6.01□□□□□ -1.45
MSH5-209ENST00000450148 MMP24-AS1A0A0U1RRL7 71 aa6□□□□□ -1.45
MSH5-209ENST00000450148 KRTAP10-10P60014 251 aa6□□□□□ -1.45
MSH5-209ENST00000450148 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.99□□□□□ -1.45
MSH5-209ENST00000450148 NREPQ16612 68 aa5.98□□□□□ -1.45
MSH5-209ENST00000450148 ETDBQ3ZM63 59 aa5.98□□□□□ -1.45
MSH5-209ENST00000450148 WFDC13Q8IUB5 93 aa5.98□□□□□ -1.45
MSH5-209ENST00000450148 TMEM254Q8TBM7 123 aa5.97□□□□□ -1.45
MSH5-209ENST00000450148 H3BT86 120 aa5.96□□□□□ -1.46
MSH5-209ENST00000450148 MRPL34Q9BQ48 92 aaKnown RBP5.96□□□□□ -1.46
MSH5-209ENST00000450148 K7EQZ3 153 aa5.95□□□□□ -1.46
MSH5-209ENST00000450148 KRTAP19-1Q8IUB9 90 aa5.95□□□□□ -1.46
MSH5-209ENST00000450148 hDV103S1A0JD37 113 aa5.92□□□□□ -1.46
MSH5-209ENST00000450148 KRTAP9-7A8MTY7 169 aa5.92□□□□□ -1.46
MSH5-209ENST00000450148 Q5W150 140 aa5.89□□□□□ -1.47
MSH5-209ENST00000450148 FCGBPQ9Y6R7 5405 aaPredicted RBP5.88□□□□□ -1.47
MSH5-209ENST00000450148 J3QR89 54 aa5.87□□□□□ -1.47
MSH5-209ENST00000450148 BPY2O14599 106 aa5.87□□□□□ -1.47
MSH5-209ENST00000450148 NDUFS5O43920 106 aa5.86□□□□□ -1.47
MSH5-209ENST00000450148 H1FX-AS1Q4G0G2 97 aa5.85□□□□□ -1.47
MSH5-209ENST00000450148 Q8N9L7 120 aa5.85□□□□□ -1.47
MSH5-209ENST00000450148 PCP4P48539 62 aa5.84□□□□□ -1.47
MSH5-209ENST00000450148 KRTAP19-6Q3LI70 58 aa5.83□□□□□ -1.48
MSH5-209ENST00000450148 IGKV2D-30A0A075B6S6 120 aa5.82□□□□□ -1.48
MSH5-209ENST00000450148 IGKV2-30P06310 120 aa5.82□□□□□ -1.48
MSH5-209ENST00000450148 C7orf65Q6ZTY9 151 aa5.82□□□□□ -1.48
MSH5-209ENST00000450148 CASC2Q6XLA1 102 aa5.81□□□□□ -1.48
MSH5-209ENST00000450148 HCG22E2RYF7 251 aa5.8□□□□□ -1.48
MSH5-209ENST00000450148 SCGB1A1P11684 91 aa5.8□□□□□ -1.48
MSH5-209ENST00000450148 FAM240AA0A1B0GVK7 77 aa5.79□□□□□ -1.48
MSH5-209ENST00000450148 MT-ATP8P03928 68 aa5.78□□□□□ -1.48
MSH5-209ENST00000450148 LINC00846Q9NV44 126 aa5.78□□□□□ -1.48
MSH5-209ENST00000450148 CXCL6P80162 114 aa5.75□□□□□ -1.49
MSH5-209ENST00000450148 C4orf26Q17RF5 130 aa5.75□□□□□ -1.49
MSH5-209ENST00000450148 KRTAP3-1Q9BYR8 98 aa5.73□□□□□ -1.49
MSH5-209ENST00000450148 UBL5Q9BZL1 73 aa5.72□□□□□ -1.49
MSH5-209ENST00000450148 ACYP1P07311 99 aa5.7□□□□□ -1.5
MSH5-209ENST00000450148 C5orf47Q569G3 176 aa5.65□□□□□ -1.5
MSH5-209ENST00000450148 LINC00643Q86TS7 51 aa5.64□□□□□ -1.51
MSH5-209ENST00000450148 MACF1Q9UPN3 7388 aaKnown RBP5.63□□□□□ -1.51
MSH5-209ENST00000450148 C1orf64Q8NEQ6 169 aa5.63□□□□□ -1.51
MSH5-209ENST00000450148 IMUPQ9GZP8 106 aa5.62□□□□□ -1.51
MSH5-209ENST00000450148 S4R3F8 94 aa5.62□□□□□ -1.51
MSH5-209ENST00000450148 LCA10Q71F78 164 aa5.61□□□□□ -1.51
MSH5-209ENST00000450148 TP53AIP1Q9HCN2 124 aa5.61□□□□□ -1.51
MSH5-209ENST00000450148 MT1BP07438 61 aa5.6□□□□□ -1.51
MSH5-209ENST00000450148 HIST1H4AP62805 103 aaKnown RBP5.59□□□□□ -1.51
MSH5-209ENST00000450148 SYNE2Q8WXH0 6885 aaKnown RBP5.58□□□□□ -1.52
MSH5-209ENST00000450148 CSAG1Q6PB30 78 aa5.58□□□□□ -1.52
MSH5-209ENST00000450148 FAM236AA0A1B0GUQ0 79 aa5.57□□□□□ -1.52
MSH5-209ENST00000450148 FAM236BA0A1B0GV22 79 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms