RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 OCIAD2Q56VL3 154 aa3.42□□□□□ -1.86
LINC01961-201ENST00000449954 H1FX-AS1Q4G0G2 97 aa3.41□□□□□ -1.86
LINC01961-201ENST00000449954 ADAMTSL4-AS1Q5T5F5 129 aa3.41□□□□□ -1.86
LINC01961-201ENST00000449954 KRTAP5-10Q6L8G5 202 aa3.41□□□□□ -1.86
LINC01961-201ENST00000449954 NDUFAF8A1L188 74 aa3.4□□□□□ -1.87
LINC01961-201ENST00000449954 TCTE3Q8IZS6 198 aa3.4□□□□□ -1.87
LINC01961-201ENST00000449954 LINC00308Q8TCZ7 52 aa3.4□□□□□ -1.87
LINC01961-201ENST00000449954 ZCCHC13Q8WW36 166 aaKnown RBP3.39□□□□□ -1.87
LINC01961-201ENST00000449954 HERVK_113P61574 105 aa3.38□□□□□ -1.87
LINC01961-201ENST00000449954 IFI27L1Q96BM0 104 aa3.38□□□□□ -1.87
LINC01961-201ENST00000449954 K7ERU9 68 aa3.37□□□□□ -1.87
LINC01961-201ENST00000449954 KRTAP5-7Q6L8G8 165 aa3.37□□□□□ -1.87
LINC01961-201ENST00000449954 SEC11CQ9BY50 192 aa3.37□□□□□ -1.87
LINC01961-201ENST00000449954 A0A087WSZ3 146 aa3.36□□□□□ -1.87
LINC01961-201ENST00000449954 C3orf79P0CE67 100 aa3.36□□□□□ -1.87
LINC01961-201ENST00000449954 RPS28P62857 69 aaKnown RBP3.36□□□□□ -1.87
LINC01961-201ENST00000449954 TEN1Q86WV5 123 aa3.36□□□□□ -1.87
LINC01961-201ENST00000449954 PRO2289Q9P1D8 64 aa3.36□□□□□ -1.87
LINC01961-201ENST00000449954 PLNP26678 52 aa3.35□□□□□ -1.87
LINC01961-201ENST00000449954 FABP9Q0Z7S8 132 aa3.35□□□□□ -1.87
LINC01961-201ENST00000449954 Q6ZQY7 126 aa3.35□□□□□ -1.87
LINC01961-201ENST00000449954 C18orf32Q8TCD1 76 aa3.35□□□□□ -1.87
LINC01961-201ENST00000449954 PPDPFLQ8WWR9 84 aa3.35□□□□□ -1.87
LINC01961-201ENST00000449954 KRTAP4-4Q9BYR3 166 aa3.35□□□□□ -1.87
LINC01961-201ENST00000449954 HSPB8Q9UJY1 196 aa3.35□□□□□ -1.87
LINC01961-201ENST00000449954 A0A1B0GX51 115 aa3.34□□□□□ -1.87
LINC01961-201ENST00000449954 TIMM17BO60830 172 aa3.34□□□□□ -1.87
LINC01961-201ENST00000449954 KRTAP5-4Q6L8H1 288 aa3.34□□□□□ -1.87
LINC01961-201ENST00000449954 H3BUT2 72 aa3.33□□□□□ -1.88
LINC01961-201ENST00000449954 M0R143 59 aa3.33□□□□□ -1.88
LINC01961-201ENST00000449954 IGKV4-1P06312 121 aa3.33□□□□□ -1.88
LINC01961-201ENST00000449954 KRTAP12-2P59991 146 aa3.33□□□□□ -1.88
LINC01961-201ENST00000449954 SNHG12Q9BXW3 62 aa3.33□□□□□ -1.88
LINC01961-201ENST00000449954 A6NDN8 102 aa3.32□□□□□ -1.88
LINC01961-201ENST00000449954 PRAC1Q96KF2 57 aa3.32□□□□□ -1.88
LINC01961-201ENST00000449954 FAM240AA0A1B0GVK7 77 aa3.31□□□□□ -1.88
LINC01961-201ENST00000449954 DSCR8Q96T75 97 aa3.31□□□□□ -1.88
LINC01961-201ENST00000449954 IGHV6-1A0A0B4J1U7 121 aa3.3□□□□□ -1.88
LINC01961-201ENST00000449954 hADV29S1A0JD25 119 aa3.3□□□□□ -1.88
LINC01961-201ENST00000449954 SERF1AO75920 110 aa3.3□□□□□ -1.88
LINC01961-201ENST00000449954 LINC00575Q6W349 94 aa3.3□□□□□ -1.88
LINC01961-201ENST00000449954 Q6ZVQ6 151 aa3.3□□□□□ -1.88
LINC01961-201ENST00000449954 C8orf87E5RJ46 101 aa3.29□□□□□ -1.88
LINC01961-201ENST00000449954 J3KT08 172 aa3.29□□□□□ -1.88
LINC01961-201ENST00000449954 DPM2O94777 84 aa3.29□□□□□ -1.88
LINC01961-201ENST00000449954 KLKP1Q107X0 134 aa3.29□□□□□ -1.88
LINC01961-201ENST00000449954 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.29□□□□□ -1.88
LINC01961-201ENST00000449954 SPRR5A0A1B0GTR4 108 aa3.28□□□□□ -1.88
LINC01961-201ENST00000449954 PMAIP1Q13794 54 aa3.28□□□□□ -1.88
LINC01961-201ENST00000449954 SMIM11BQ8TCY0 68 aa3.28□□□□□ -1.88
LINC01961-201ENST00000449954 COPS9Q8WXC6 57 aa3.28□□□□□ -1.88
LINC01961-201ENST00000449954 CHCHD1Q96BP2 118 aaKnown RBP3.28□□□□□ -1.88
LINC01961-201ENST00000449954 E9PLD3 99 aa3.27□□□□□ -1.89
LINC01961-201ENST00000449954 IGKCP01834 107 aa3.27□□□□□ -1.89
LINC01961-201ENST00000449954 PYY3Q5JQD4 70 aa3.26□□□□□ -1.89
LINC01961-201ENST00000449954 PRR15Q8IV56 129 aa3.26□□□□□ -1.89
LINC01961-201ENST00000449954 RAB37Q96AX2 223 aa3.26□□□□□ -1.89
LINC01961-201ENST00000449954 TMEM218A2RU14 115 aa3.25□□□□□ -1.89
LINC01961-201ENST00000449954 C9JAW5 83 aa3.25□□□□□ -1.89
LINC01961-201ENST00000449954 MT1XP80297 61 aa3.25□□□□□ -1.89
LINC01961-201ENST00000449954 COL5A1-AS1Q5SY13 56 aa3.24□□□□□ -1.89
LINC01961-201ENST00000449954 LYRM7Q5U5X0 104 aa3.24□□□□□ -1.89
LINC01961-201ENST00000449954 CRIPTQ9P021 101 aa3.24□□□□□ -1.89
LINC01961-201ENST00000449954 TRAPPC1Q9Y5R8 145 aa3.24□□□□□ -1.89
LINC01961-201ENST00000449954 IGKV3D-7A0A0C4DH55 119 aa3.23□□□□□ -1.89
LINC01961-201ENST00000449954 A0A1B0GVX0 72 aa3.23□□□□□ -1.89
LINC01961-201ENST00000449954 CLLU1Q5K131 121 aa3.23□□□□□ -1.89
LINC01961-201ENST00000449954 IFITM1P13164 125 aa3.22□□□□□ -1.89
LINC01961-201ENST00000449954 MT4P47944 62 aa3.22□□□□□ -1.89
LINC01961-201ENST00000449954 LINC00472Q9H8W2 130 aa3.22□□□□□ -1.89
LINC01961-201ENST00000449954 LEPROTL1O95214 131 aa3.21□□□□□ -1.9
LINC01961-201ENST00000449954 DEFB116Q30KQ4 102 aa3.21□□□□□ -1.9
LINC01961-201ENST00000449954 PMCHL2Q9BQD1 86 aa3.21□□□□□ -1.9
LINC01961-201ENST00000449954 NDUFV3P56181 108 aaKnown RBP3.2□□□□□ -1.9
LINC01961-201ENST00000449954 CSAG1Q6PB30 78 aa3.2□□□□□ -1.9
LINC01961-201ENST00000449954 HSD52Q0P140 79 aa3.19□□□□□ -1.9
LINC01961-201ENST00000449954 BATFQ16520 125 aa3.19□□□□□ -1.9
LINC01961-201ENST00000449954 LCA10Q71F78 164 aa3.19□□□□□ -1.9
LINC01961-201ENST00000449954 ANAPC13Q9BS18 74 aa3.19□□□□□ -1.9
LINC01961-201ENST00000449954 TRBV7-4A0A0J9YYF1 115 aa3.18□□□□□ -1.9
LINC01961-201ENST00000449954 TRGC2P03986 189 aa3.18□□□□□ -1.9
LINC01961-201ENST00000449954 H3BMG7 143 aa3.17□□□□□ -1.9
LINC01961-201ENST00000449954 LCE3EQ5T5B0 92 aa3.17□□□□□ -1.9
LINC01961-201ENST00000449954 SCGB1D4Q6XE38 83 aa3.17□□□□□ -1.9
LINC01961-201ENST00000449954 RBM3P98179 157 aaKnown RBP3.16□□□□□ -1.9
LINC01961-201ENST00000449954 BVES-AS1Q5T3Y7 98 aa3.16□□□□□ -1.9
LINC01961-201ENST00000449954 S100A2P29034 98 aa3.15□□□□□ -1.91
LINC01961-201ENST00000449954 MUSTN1Q8IVN3 82 aa3.15□□□□□ -1.91
LINC01961-201ENST00000449954 S4R3F8 94 aa3.15□□□□□ -1.91
LINC01961-201ENST00000449954 CCDC179H3BU77 68 aa3.14□□□□□ -1.91
LINC01961-201ENST00000449954 NDUFS5O43920 106 aa3.14□□□□□ -1.91
LINC01961-201ENST00000449954 ANKRD29Q8N6D5 301 aa3.14□□□□□ -1.91
LINC01961-201ENST00000449954 NAA38Q9BRA0 125 aaKnown RBP3.14□□□□□ -1.91
LINC01961-201ENST00000449954 TTTY13Q9BZ97 58 aa3.14□□□□□ -1.91
LINC01961-201ENST00000449954 SNCGO76070 127 aa3.13□□□□□ -1.91
LINC01961-201ENST00000449954 C7orf65Q6ZTY9 151 aa3.12□□□□□ -1.91
LINC01961-201ENST00000449954 C2orf91Q6ZV80 131 aa3.12□□□□□ -1.91
LINC01961-201ENST00000449954 GTF2H5Q6ZYL4 71 aa3.12□□□□□ -1.91
LINC01961-201ENST00000449954 J3QR89 54 aa3.11□□□□□ -1.91
LINC01961-201ENST00000449954 TRACP01848 142 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms