RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 LIMD2Q9BT23 127 aa6.01□□□□□ -1.45
CCDC171-203ENST00000449575 IGLV1-50A0A075B6I6 118 aa6.01□□□□□ -1.45
CCDC171-203ENST00000449575 KTN1-AS1Q86SY8 53 aa6.01□□□□□ -1.45
CCDC171-203ENST00000449575 A8MUN3 132 aa6□□□□□ -1.45
CCDC171-203ENST00000449575 FAT3Q8TDW7 4589 aa6□□□□□ -1.45
CCDC171-203ENST00000449575 NDUFS5O43920 106 aa5.99□□□□□ -1.45
CCDC171-203ENST00000449575 MP68P56378 58 aa5.98□□□□□ -1.45
CCDC171-203ENST00000449575 IGLV7-43P04211 117 aa5.98□□□□□ -1.45
CCDC171-203ENST00000449575 Q5VV11 94 aa5.98□□□□□ -1.45
CCDC171-203ENST00000449575 SPANXA2-OT1Q8N9U9 137 aa5.97□□□□□ -1.45
CCDC171-203ENST00000449575 HCG22E2RYF7 251 aa5.96□□□□□ -1.45
CCDC171-203ENST00000449575 ATP11AUNQ6ZP68 121 aa5.96□□□□□ -1.45
CCDC171-203ENST00000449575 CHKB-CPT1BH3BT56 60 aa5.96□□□□□ -1.46
CCDC171-203ENST00000449575 PRLHP81277 87 aa5.96□□□□□ -1.46
CCDC171-203ENST00000449575 Q8N377 158 aa5.96□□□□□ -1.46
CCDC171-203ENST00000449575 Q8NBF4 154 aa5.96□□□□□ -1.46
CCDC171-203ENST00000449575 DHRS4-AS1Q9P1J3 65 aa5.96□□□□□ -1.46
CCDC171-203ENST00000449575 H3BPC8 53 aa5.95□□□□□ -1.46
CCDC171-203ENST00000449575 REG3GQ6UW15 175 aa5.95□□□□□ -1.46
CCDC171-203ENST00000449575 DSCR10P59022 87 aa5.95□□□□□ -1.46
CCDC171-203ENST00000449575 DEFB105AQ8NG35 78 aa5.95□□□□□ -1.46
CCDC171-203ENST00000449575 SPRR4Q96PI1 79 aa5.95□□□□□ -1.46
CCDC171-203ENST00000449575 Q9BRP9 147 aa5.95□□□□□ -1.46
CCDC171-203ENST00000449575 A0A1W2PNM2 257 aa5.95□□□□□ -1.46
CCDC171-203ENST00000449575 KCNQ1DNQ9H478 68 aa5.95□□□□□ -1.46
CCDC171-203ENST00000449575 PRR4Q16378 134 aa5.94□□□□□ -1.46
CCDC171-203ENST00000449575 KRTAP13-1Q8IUC0 172 aa5.94□□□□□ -1.46
CCDC171-203ENST00000449575 LINC00208Q96KT6 92 aa5.94□□□□□ -1.46
CCDC171-203ENST00000449575 KRTAP4-16G5E9R7 235 aaPredicted RBP5.94□□□□□ -1.46
CCDC171-203ENST00000449575 Q8N9P0 234 aaPredicted RBP5.94□□□□□ -1.46
CCDC171-203ENST00000449575 ST20-AS1Q8NBB2 130 aa5.94□□□□□ -1.46
CCDC171-203ENST00000449575 K7EQZ3 153 aa5.93□□□□□ -1.46
CCDC171-203ENST00000449575 ZNF861PO60384 105 aa5.93□□□□□ -1.46
CCDC171-203ENST00000449575 SPRR1AP35321 89 aa5.93□□□□□ -1.46
CCDC171-203ENST00000449575 SPINK6Q6UWN8 80 aa5.93□□□□□ -1.46
CCDC171-203ENST00000449575 Q75L30 129 aa5.92□□□□□ -1.46
CCDC171-203ENST00000449575 PRR15LQ9BU68 103 aa5.92□□□□□ -1.46
CCDC171-203ENST00000449575 TNXBP22105 4242 aa5.91□□□□□ -1.46
CCDC171-203ENST00000449575 H0Y9J4 135 aa5.91□□□□□ -1.46
CCDC171-203ENST00000449575 SPTSSBQ8NFR3 76 aa5.9□□□□□ -1.46
CCDC171-203ENST00000449575 DMBT1Q9UGM3 2413 aaPredicted RBP5.89□□□□□ -1.47
CCDC171-203ENST00000449575 LOC101927531A0A1B0GV80 90 aa5.89□□□□□ -1.47
CCDC171-203ENST00000449575 KRTAP1-4P0C5Y4 121 aa5.89□□□□□ -1.47
CCDC171-203ENST00000449575 Q6ZRX8 168 aa5.89□□□□□ -1.47
CCDC171-203ENST00000449575 ANAPC11Q9NYG5 84 aa5.89□□□□□ -1.47
CCDC171-203ENST00000449575 A6NED7 52 aa5.88□□□□□ -1.47
CCDC171-203ENST00000449575 HERC1Q15751 4861 aa5.88□□□□□ -1.47
CCDC171-203ENST00000449575 A6NN06 94 aa5.87□□□□□ -1.47
CCDC171-203ENST00000449575 A8MU10 97 aa5.87□□□□□ -1.47
CCDC171-203ENST00000449575 CDC42SE1Q9NRR8 79 aa5.87□□□□□ -1.47
CCDC171-203ENST00000449575 MT1HL1P0DM35 61 aa5.86□□□□□ -1.47
CCDC171-203ENST00000449575 LINC00313P59037 77 aa5.86□□□□□ -1.47
CCDC171-203ENST00000449575 H0Y9P7 68 aa5.86□□□□□ -1.47
CCDC171-203ENST00000449575 C7orf65Q6ZTY9 151 aa5.86□□□□□ -1.47
CCDC171-203ENST00000449575 KRTAP29-1A8MX34 341 aaPredicted RBP5.85□□□□□ -1.47
CCDC171-203ENST00000449575 LCA10Q71F78 164 aa5.85□□□□□ -1.47
CCDC171-203ENST00000449575 WFDC13Q8IUB5 93 aa5.85□□□□□ -1.47
CCDC171-203ENST00000449575 A0A087X002 238 aa5.84□□□□□ -1.47
CCDC171-203ENST00000449575 ZNF706Q9Y5V0 76 aaPredicted RBP5.83□□□□□ -1.48
CCDC171-203ENST00000449575 KRTAP10-8P60410 259 aa5.81□□□□□ -1.48
CCDC171-203ENST00000449575 COA5Q86WW8 74 aa5.81□□□□□ -1.48
CCDC171-203ENST00000449575 CASC2Q6XLA1 102 aa5.81□□□□□ -1.48
CCDC171-203ENST00000449575 IGLV7-46A0A075B6I9 117 aa5.8□□□□□ -1.48
CCDC171-203ENST00000449575 KRTAP13-2Q52LG2 175 aa5.8□□□□□ -1.48
CCDC171-203ENST00000449575 LINC01558Q9Y6Z2 57 aa5.8□□□□□ -1.48
CCDC171-203ENST00000449575 DEFB116Q30KQ4 102 aa5.78□□□□□ -1.48
CCDC171-203ENST00000449575 IGFL1Q6UW32 110 aa5.78□□□□□ -1.48
CCDC171-203ENST00000449575 IGLV8-61A0A075B6I0 122 aa5.77□□□□□ -1.49
CCDC171-203ENST00000449575 MOBPQ13875 183 aa5.77□□□□□ -1.49
CCDC171-203ENST00000449575 A0A087WSZ3 146 aa5.76□□□□□ -1.49
CCDC171-203ENST00000449575 LINC00483Q53H64 154 aa5.76□□□□□ -1.49
CCDC171-203ENST00000449575 A8MWP4 228 aa5.75□□□□□ -1.49
CCDC171-203ENST00000449575 IGLV9-49A0A0B4J1Y8 123 aa5.74□□□□□ -1.49
CCDC171-203ENST00000449575 TYMSOSQ8TAI1 123 aa5.74□□□□□ -1.49
CCDC171-203ENST00000449575 TP53AIP1Q9HCN2 124 aa5.72□□□□□ -1.49
CCDC171-203ENST00000449575 SPRR1BP22528 89 aa5.71□□□□□ -1.5
CCDC171-203ENST00000449575 LINC01554Q52M75 96 aa5.71□□□□□ -1.5
CCDC171-203ENST00000449575 SPAG11AQ6PDA7 123 aa5.71□□□□□ -1.5
CCDC171-203ENST00000449575 A0A0G2JQZ4 141 aa5.69□□□□□ -1.5
CCDC171-203ENST00000449575 IGHV6-1A0A0B4J1U7 121 aa5.68□□□□□ -1.5
CCDC171-203ENST00000449575 ASB16-AS1Q495Z4 193 aa5.68□□□□□ -1.5
CCDC171-203ENST00000449575 LINC00472Q9H8W2 130 aa5.68□□□□□ -1.5
CCDC171-203ENST00000449575 HMCN2Q8NDA2 5059 aa5.68□□□□□ -1.5
CCDC171-203ENST00000449575 SPINK7P58062 85 aa5.67□□□□□ -1.5
CCDC171-203ENST00000449575 MMP24-AS1A0A0U1RRL7 71 aa5.67□□□□□ -1.5
CCDC171-203ENST00000449575 LINC00304Q8N9R0 145 aa5.67□□□□□ -1.5
CCDC171-203ENST00000449575 PCOTHQ58A44 107 aa5.66□□□□□ -1.5
CCDC171-203ENST00000449575 LPAP08519 4548 aa5.65□□□□□ -1.51
CCDC171-203ENST00000449575 HRES1P13985 223 aa5.63□□□□□ -1.51
CCDC171-203ENST00000449575 LCE2DQ5TA82 110 aaPredicted RBP5.63□□□□□ -1.51
CCDC171-203ENST00000449575 SSBP3-AS1Q7Z2R9 100 aa5.63□□□□□ -1.51
CCDC171-203ENST00000449575 RETNLBQ9BQ08 111 aa5.63□□□□□ -1.51
CCDC171-203ENST00000449575 LRP2P98164 4655 aa5.61□□□□□ -1.51
CCDC171-203ENST00000449575 SEC61BP60468 96 aaKnown RBP5.61□□□□□ -1.51
CCDC171-203ENST00000449575 SPINK1P00995 79 aa5.58□□□□□ -1.52
CCDC171-203ENST00000449575 C8orf17Q9NRJ1 99 aa5.58□□□□□ -1.52
CCDC171-203ENST00000449575 PRAC1Q96KF2 57 aa5.56□□□□□ -1.52
CCDC171-203ENST00000449575 ACYP2P14621 99 aa5.55□□□□□ -1.52
CCDC171-203ENST00000449575 MRPL34Q9BQ48 92 aaKnown RBP5.54□□□□□ -1.52
CCDC171-203ENST00000449575 UBR4Q5T4S7 5183 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms