RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 DSCR8Q96T75 97 aa7.86□□□□□ -1.15
USP39-206ENST00000448971 SIGMAR1Q99720 223 aa7.86□□□□□ -1.15
USP39-206ENST00000448971 RPL37P61927 97 aaKnown RBP7.85□□□□□ -1.15
USP39-206ENST00000448971 OBSCN-AS1Q96MR7 158 aa7.85□□□□□ -1.15
USP39-206ENST00000448971 KRTAP3-1Q9BYR8 98 aa7.84□□□□□ -1.15
USP39-206ENST00000448971 Q96NJ1 140 aa7.83□□□□□ -1.16
USP39-206ENST00000448971 TRBV20-1A0A075B6N2 111 aa7.82□□□□□ -1.16
USP39-206ENST00000448971 KRTAP19-2Q3LHN2 52 aa7.82□□□□□ -1.16
USP39-206ENST00000448971 C9JAW5 83 aa7.8□□□□□ -1.16
USP39-206ENST00000448971 JMJD7-PLA2G4BH0Y9G9 81 aa7.79□□□□□ -1.16
USP39-206ENST00000448971 IGKV4-1P06312 121 aa7.79□□□□□ -1.16
USP39-206ENST00000448971 TAX1BP3O14907 124 aa7.78□□□□□ -1.16
USP39-206ENST00000448971 A0A1W2PPM0 123 aa7.77□□□□□ -1.17
USP39-206ENST00000448971 MT1HP80294 61 aa7.76□□□□□ -1.17
USP39-206ENST00000448971 DEFB116Q30KQ4 102 aa7.76□□□□□ -1.17
USP39-206ENST00000448971 DSCR10P59022 87 aa7.75□□□□□ -1.17
USP39-206ENST00000448971 Q75L30 129 aa7.75□□□□□ -1.17
USP39-206ENST00000448971 ATP11AUNQ6ZP68 121 aa7.74□□□□□ -1.17
USP39-206ENST00000448971 C14orf132Q9NPU4 83 aa7.74□□□□□ -1.17
USP39-206ENST00000448971 Q6ZQT0 140 aa7.73□□□□□ -1.17
USP39-206ENST00000448971 MTURNQ8N3F0 131 aa7.73□□□□□ -1.17
USP39-206ENST00000448971 LINC00472Q9H8W2 130 aa7.73□□□□□ -1.17
USP39-206ENST00000448971 LOC110117498A0A087WWA1 95 aa7.72□□□□□ -1.17
USP39-206ENST00000448971 H3BT86 120 aa7.72□□□□□ -1.17
USP39-206ENST00000448971 PDE6GP18545 87 aa7.71□□□□□ -1.18
USP39-206ENST00000448971 IGHV6-1A0A0B4J1U7 121 aa7.7□□□□□ -1.18
USP39-206ENST00000448971 C20orf166-AS1Q96NR2 134 aa7.7□□□□□ -1.18
USP39-206ENST00000448971 SPCS1Q9Y6A9 102 aa7.7□□□□□ -1.18
USP39-206ENST00000448971 LINC00313P59037 77 aa7.69□□□□□ -1.18
USP39-206ENST00000448971 COL5A1-AS1Q5SY13 56 aa7.69□□□□□ -1.18
USP39-206ENST00000448971 A8MUU9 505 aa7.67□□□□□ -1.18
USP39-206ENST00000448971 J3KT08 172 aa7.67□□□□□ -1.18
USP39-206ENST00000448971 A0A1B0GW54 56 aa7.66□□□□□ -1.18
USP39-206ENST00000448971 KRTAP10-6P60371 365 aaPredicted RBP7.66□□□□□ -1.18
USP39-206ENST00000448971 KRTAP4-9Q9BYQ8 210 aa7.66□□□□□ -1.18
USP39-206ENST00000448971 A0A1B0GVX0 72 aa7.65□□□□□ -1.18
USP39-206ENST00000448971 PCP4L1A6NKN8 68 aa7.64□□□□□ -1.19
USP39-206ENST00000448971 C8orf87E5RJ46 101 aa7.64□□□□□ -1.19
USP39-206ENST00000448971 KRTAP16-1A8MUX0 517 aa7.63□□□□□ -1.19
USP39-206ENST00000448971 LCE4AQ5TA78 99 aa7.63□□□□□ -1.19
USP39-206ENST00000448971 NOTCH2NLQ7Z3S9 236 aa7.63□□□□□ -1.19
USP39-206ENST00000448971 NDUFB1O75438 58 aa7.62□□□□□ -1.19
USP39-206ENST00000448971 COX6B2Q6YFQ2 88 aa7.62□□□□□ -1.19
USP39-206ENST00000448971 FLGP20930 4061 aaPredicted RBP7.61□□□□□ -1.19
USP39-206ENST00000448971 KRTAP9-7A8MTY7 169 aa7.59□□□□□ -1.19
USP39-206ENST00000448971 K7EP34 96 aa7.59□□□□□ -1.19
USP39-206ENST00000448971 NREPQ16612 68 aa7.59□□□□□ -1.19
USP39-206ENST00000448971 A8MWP4 228 aa7.58□□□□□ -1.2
USP39-206ENST00000448971 KRTAP4-2Q9BYR5 136 aa7.56□□□□□ -1.2
USP39-206ENST00000448971 IGKV3D-7A0A0C4DH55 119 aa7.54□□□□□ -1.2
USP39-206ENST00000448971 C8orf17Q9NRJ1 99 aa7.54□□□□□ -1.2
USP39-206ENST00000448971 GTF2H5Q6ZYL4 71 aa7.53□□□□□ -1.2
USP39-206ENST00000448971 PRO0461Q9UI25 63 aa7.52□□□□□ -1.21
USP39-206ENST00000448971 M0R2T5 61 aa7.51□□□□□ -1.21
USP39-206ENST00000448971 PRR15Q8IV56 129 aa7.5□□□□□ -1.21
USP39-206ENST00000448971 BPY2O14599 106 aa7.48□□□□□ -1.21
USP39-206ENST00000448971 K7EQZ3 153 aa7.47□□□□□ -1.21
USP39-206ENST00000448971 Q6ZVQ6 151 aa7.47□□□□□ -1.21
USP39-206ENST00000448971 ZCCHC13Q8WW36 166 aaKnown RBP7.47□□□□□ -1.21
USP39-206ENST00000448971 Q8N9P0 234 aaPredicted RBP7.46□□□□□ -1.22
USP39-206ENST00000448971 MMP24-AS1A0A0U1RRL7 71 aa7.45□□□□□ -1.22
USP39-206ENST00000448971 FAM236DA0A1B0GTK5 79 aa7.43□□□□□ -1.22
USP39-206ENST00000448971 FAM236CP0DP71 79 aa7.43□□□□□ -1.22
USP39-206ENST00000448971 TMEM254Q8TBM7 123 aa7.43□□□□□ -1.22
USP39-206ENST00000448971 UBL5Q9BZL1 73 aa7.43□□□□□ -1.22
USP39-206ENST00000448971 F8W1H4 67 aa7.42□□□□□ -1.22
USP39-206ENST00000448971 MRPL34Q9BQ48 92 aaKnown RBP7.42□□□□□ -1.22
USP39-206ENST00000448971 SSPOA2VEC9 5147 aa7.42□□□□□ -1.22
USP39-206ENST00000448971 hDV103S1A0JD37 113 aa7.41□□□□□ -1.22
USP39-206ENST00000448971 USH2AO75445 5202 aa7.41□□□□□ -1.22
USP39-206ENST00000448971 NDUFS5O43920 106 aa7.4□□□□□ -1.22
USP39-206ENST00000448971 Q8N9L7 120 aa7.4□□□□□ -1.22
USP39-206ENST00000448971 LINC00846Q9NV44 126 aa7.4□□□□□ -1.22
USP39-206ENST00000448971 RBM12B-AS1Q9P1G2 102 aa7.4□□□□□ -1.22
USP39-206ENST00000448971 ETDBQ3ZM63 59 aa7.39□□□□□ -1.23
USP39-206ENST00000448971 HRES1P13985 223 aa7.38□□□□□ -1.23
USP39-206ENST00000448971 WFDC13Q8IUB5 93 aa7.37□□□□□ -1.23
USP39-206ENST00000448971 SPINK7P58062 85 aa7.36□□□□□ -1.23
USP39-206ENST00000448971 KRTAP4-11Q9BYQ6 195 aa7.36□□□□□ -1.23
USP39-206ENST00000448971 CASC2Q6XLA1 102 aa7.34□□□□□ -1.23
USP39-206ENST00000448971 MPLKIPQ8TAP9 179 aa7.33□□□□□ -1.24
USP39-206ENST00000448971 KRTAP9-8Q9BYQ0 159 aa7.32□□□□□ -1.24
USP39-206ENST00000448971 FCGBPQ9Y6R7 5405 aaPredicted RBP7.3□□□□□ -1.24
USP39-206ENST00000448971 HCG22E2RYF7 251 aa7.29□□□□□ -1.24
USP39-206ENST00000448971 CXCL6P80162 114 aa7.25□□□□□ -1.25
USP39-206ENST00000448971 IGKV2D-30A0A075B6S6 120 aa7.24□□□□□ -1.25
USP39-206ENST00000448971 IGKV2-30P06310 120 aa7.24□□□□□ -1.25
USP39-206ENST00000448971 PCP4P48539 62 aa7.23□□□□□ -1.25
USP39-206ENST00000448971 C7orf65Q6ZTY9 151 aa7.23□□□□□ -1.25
USP39-206ENST00000448971 KRTAP9-3Q9BYQ3 159 aa7.23□□□□□ -1.25
USP39-206ENST00000448971 ACYP1P07311 99 aa7.21□□□□□ -1.26
USP39-206ENST00000448971 Q5W150 140 aa7.21□□□□□ -1.26
USP39-206ENST00000448971 A0A1B0GV90 55 aa7.2□□□□□ -1.26
USP39-206ENST00000448971 FAM240AA0A1B0GVK7 77 aa7.19□□□□□ -1.26
USP39-206ENST00000448971 ATP5EP2Q5VTU8 51 aa7.16□□□□□ -1.26
USP39-206ENST00000448971 MT2AP02795 61 aa7.14□□□□□ -1.27
USP39-206ENST00000448971 LCE5AQ5TCM9 118 aa7.13□□□□□ -1.27
USP39-206ENST00000448971 TP53AIP1Q9HCN2 124 aa7.12□□□□□ -1.27
USP39-206ENST00000448971 HIST1H4AP62805 103 aaKnown RBP7.11□□□□□ -1.27
USP39-206ENST00000448971 KRTAP15-1Q3LI76 137 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms