RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 LIMD2Q9BT23 127 aa8.09□□□□□ -1.11
POLR1B-209ENST00000448770 TP53AIP1Q9HCN2 124 aa8.09□□□□□ -1.11
POLR1B-209ENST00000448770 RTL8CO15255 209 aa8.08□□□□□ -1.12
POLR1B-209ENST00000448770 MRPL34Q9BQ48 92 aaKnown RBP8.07□□□□□ -1.12
POLR1B-209ENST00000448770 NUPR2A6NF83 97 aa8.07□□□□□ -1.12
POLR1B-209ENST00000448770 LCA10Q71F78 164 aa8.06□□□□□ -1.12
POLR1B-209ENST00000448770 DNHD1Q96M86 4753 aa8.06□□□□□ -1.12
POLR1B-209ENST00000448770 DNAH6Q9C0G6 4158 aa8.06□□□□□ -1.12
POLR1B-209ENST00000448770 Q5W150 140 aa8.06□□□□□ -1.12
POLR1B-209ENST00000448770 LOC101927531A0A1B0GV80 90 aa8.05□□□□□ -1.12
POLR1B-209ENST00000448770 ZNF861PO60384 105 aa8.05□□□□□ -1.12
POLR1B-209ENST00000448770 DNAH11Q96DT5 4516 aa8.05□□□□□ -1.12
POLR1B-209ENST00000448770 HRES1P13985 223 aa8.05□□□□□ -1.12
POLR1B-209ENST00000448770 PLAC8Q9NZF1 115 aa8.04□□□□□ -1.12
POLR1B-209ENST00000448770 Q75L30 129 aa8.04□□□□□ -1.12
POLR1B-209ENST00000448770 ZNF706Q9Y5V0 76 aaPredicted RBP8.04□□□□□ -1.12
POLR1B-209ENST00000448770 PMAIP1Q13794 54 aa8.03□□□□□ -1.12
POLR1B-209ENST00000448770 SPAG11AQ6PDA7 123 aa8.03□□□□□ -1.12
POLR1B-209ENST00000448770 SPINK6Q6UWN8 80 aa8.03□□□□□ -1.12
POLR1B-209ENST00000448770 MEGF8Q7Z7M0 2845 aa8.03□□□□□ -1.12
POLR1B-209ENST00000448770 KRTAP13-3Q3SY46 172 aa8.03□□□□□ -1.12
POLR1B-209ENST00000448770 TGP01266 2768 aa8.02□□□□□ -1.13
POLR1B-209ENST00000448770 DNAH5Q8TE73 4624 aa8.02□□□□□ -1.13
POLR1B-209ENST00000448770 CDK2AP2O75956 126 aa8.01□□□□□ -1.13
POLR1B-209ENST00000448770 LINC01558Q9Y6Z2 57 aa7.98□□□□□ -1.13
POLR1B-209ENST00000448770 A6NED7 52 aa7.97□□□□□ -1.13
POLR1B-209ENST00000448770 CIRBP-AS1Q8TBR5 109 aa7.96□□□□□ -1.13
POLR1B-209ENST00000448770 IGLV7-43P04211 117 aa7.95□□□□□ -1.14
POLR1B-209ENST00000448770 SPTSSBQ8NFR3 76 aa7.95□□□□□ -1.14
POLR1B-209ENST00000448770 SPINK7P58062 85 aa7.94□□□□□ -1.14
POLR1B-209ENST00000448770 PRR26Q8N8Z3 221 aa7.94□□□□□ -1.14
POLR1B-209ENST00000448770 LRP1BQ9NZR2 4599 aa7.93□□□□□ -1.14
POLR1B-209ENST00000448770 SEC61GP60059 68 aa7.92□□□□□ -1.14
POLR1B-209ENST00000448770 CDC42SE1Q9NRR8 79 aa7.9□□□□□ -1.15
POLR1B-209ENST00000448770 A6NN06 94 aa7.88□□□□□ -1.15
POLR1B-209ENST00000448770 RETNLBQ9BQ08 111 aa7.88□□□□□ -1.15
POLR1B-209ENST00000448770 ATP11AUNQ6ZP68 121 aa7.88□□□□□ -1.15
POLR1B-209ENST00000448770 KRTAP10-2P60368 255 aa7.87□□□□□ -1.15
POLR1B-209ENST00000448770 KRTAP13-2Q52LG2 175 aa7.86□□□□□ -1.15
POLR1B-209ENST00000448770 C1orf134Q5TEV5 83 aa7.85□□□□□ -1.15
POLR1B-209ENST00000448770 PKD1P98161 4303 aa7.85□□□□□ -1.15
POLR1B-209ENST00000448770 KTN1-AS1Q86SY8 53 aa7.83□□□□□ -1.16
POLR1B-209ENST00000448770 HYDINQ4G0P3 5121 aa7.82□□□□□ -1.16
POLR1B-209ENST00000448770 SSBP3-AS1Q7Z2R9 100 aa7.81□□□□□ -1.16
POLR1B-209ENST00000448770 FAT2Q9NYQ8 4349 aa7.81□□□□□ -1.16
POLR1B-209ENST00000448770 C8orf87E5RJ46 101 aa7.81□□□□□ -1.16
POLR1B-209ENST00000448770 DMAC1Q96GE9 116 aa7.8□□□□□ -1.16
POLR1B-209ENST00000448770 KRTAP16-1A8MUX0 517 aa7.8□□□□□ -1.16
POLR1B-209ENST00000448770 LINC00313P59037 77 aa7.8□□□□□ -1.16
POLR1B-209ENST00000448770 LY6G6CO95867 125 aa7.78□□□□□ -1.16
POLR1B-209ENST00000448770 ACYP2P14621 99 aa7.78□□□□□ -1.16
POLR1B-209ENST00000448770 VPS13BQ7Z7G8 4022 aa7.77□□□□□ -1.17
POLR1B-209ENST00000448770 IGKV2-30P06310 120 aa7.77□□□□□ -1.17
POLR1B-209ENST00000448770 FAM229AH3BQW9 127 aa7.75□□□□□ -1.17
POLR1B-209ENST00000448770 KRTAP10-1P60331 282 aa7.74□□□□□ -1.17
POLR1B-209ENST00000448770 KRTAP1-4P0C5Y4 121 aa7.74□□□□□ -1.17
POLR1B-209ENST00000448770 RBM12B-AS1Q9P1G2 102 aa7.72□□□□□ -1.17
POLR1B-209ENST00000448770 Q6ZSA8 131 aa7.71□□□□□ -1.18
POLR1B-209ENST00000448770 IGKV2D-30A0A075B6S6 120 aa7.67□□□□□ -1.18
POLR1B-209ENST00000448770 C7orf65Q6ZTY9 151 aa7.67□□□□□ -1.18
POLR1B-209ENST00000448770 A0A1B0GU69 56 aa7.64□□□□□ -1.19
POLR1B-209ENST00000448770 PKHD1P08F94 4074 aa7.62□□□□□ -1.19
POLR1B-209ENST00000448770 ADM2Q7Z4H4 148 aa7.6□□□□□ -1.19
POLR1B-209ENST00000448770 PRAC1Q96KF2 57 aa7.59□□□□□ -1.19
POLR1B-209ENST00000448770 SPATA8Q6RVD6 105 aa7.58□□□□□ -1.2
POLR1B-209ENST00000448770 PLA2G1BP04054 148 aaKnown RBP7.57□□□□□ -1.2
POLR1B-209ENST00000448770 SACSQ9NZJ4 4579 aa7.56□□□□□ -1.2
POLR1B-209ENST00000448770 Q8N1X5 172 aa7.55□□□□□ -1.2
POLR1B-209ENST00000448770 TYMSOSQ8TAI1 123 aa7.55□□□□□ -1.2
POLR1B-209ENST00000448770 MIR22HGQ0VDD5 57 aa7.52□□□□□ -1.21
POLR1B-209ENST00000448770 SPINK1P00995 79 aa7.51□□□□□ -1.21
POLR1B-209ENST00000448770 DYNC1H1Q14204 4646 aaKnown RBP7.5□□□□□ -1.21
POLR1B-209ENST00000448770 UQCR11O14957 56 aa7.5□□□□□ -1.21
POLR1B-209ENST00000448770 C4orf48Q5BLP8 95 aa7.5□□□□□ -1.21
POLR1B-209ENST00000448770 FAT1Q14517 4588 aa7.49□□□□□ -1.21
POLR1B-209ENST00000448770 PKHD1L1Q86WI1 4243 aa7.46□□□□□ -1.22
POLR1B-209ENST00000448770 LINC00304Q8N9R0 145 aa7.44□□□□□ -1.22
POLR1B-209ENST00000448770 APOBP04114 4563 aaKnown RBP7.42□□□□□ -1.22
POLR1B-209ENST00000448770 C9orf92A6NGG3 77 aa7.42□□□□□ -1.22
POLR1B-209ENST00000448770 KRTAP3-1Q9BYR8 98 aa7.41□□□□□ -1.22
POLR1B-209ENST00000448770 SMR3BP02814 79 aaPredicted RBP7.4□□□□□ -1.22
POLR1B-209ENST00000448770 H0YAA0 97 aa7.35□□□□□ -1.23
POLR1B-209ENST00000448770 RPS29P62273 56 aaKnown RBP7.35□□□□□ -1.23
POLR1B-209ENST00000448770 A8MUU9 505 aa7.34□□□□□ -1.23
POLR1B-209ENST00000448770 C20orf166-AS1Q96NR2 134 aa7.34□□□□□ -1.23
POLR1B-209ENST00000448770 KRTAP10-4P60372 401 aaPredicted RBP7.33□□□□□ -1.24
POLR1B-209ENST00000448770 CSAG1Q6PB30 78 aa7.29□□□□□ -1.24
POLR1B-209ENST00000448770 RYR2Q92736 4967 aa7.27□□□□□ -1.25
POLR1B-209ENST00000448770 A0A1B0GVY2 172 aa7.26□□□□□ -1.25
POLR1B-209ENST00000448770 LINC01554Q52M75 96 aa7.26□□□□□ -1.25
POLR1B-209ENST00000448770 KMT2CQ8NEZ4 4911 aaKnown RBP7.24□□□□□ -1.25
POLR1B-209ENST00000448770 FAT3Q8TDW7 4589 aa7.23□□□□□ -1.25
POLR1B-209ENST00000448770 LRP1Q07954 4544 aaKnown RBP7.22□□□□□ -1.25
POLR1B-209ENST00000448770 A0A1B0GU33 70 aa7.2□□□□□ -1.26
POLR1B-209ENST00000448770 FLG2Q5D862 2391 aaPredicted RBP7.2□□□□□ -1.26
POLR1B-209ENST00000448770 H1FX-AS1Q4G0G2 97 aa7.19□□□□□ -1.26
POLR1B-209ENST00000448770 HSPG2P98160 4391 aa7.18□□□□□ -1.26
POLR1B-209ENST00000448770 TNXBP22105 4242 aa7.16□□□□□ -1.26
POLR1B-209ENST00000448770 COX6B2Q6YFQ2 88 aa7.14□□□□□ -1.27
POLR1B-209ENST00000448770 MYCBP2O75592 4640 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms