RNA–Protein interactions for RNA: ENST00000448748.1

LINC00349-201, long intergenic non-protein coding RNA 349, humanhuman

TSL 5 BASIC

Gene LINC00349, Length 841 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00349-201ENST00000448748 Q6Q795 121 aa3.7□□□□□ -1.82
LINC00349-201ENST00000448748 HRCT1Q6UXD1 115 aa3.7□□□□□ -1.82
LINC00349-201ENST00000448748 KRTAP4-1Q9BYQ7 146 aa3.7□□□□□ -1.82
LINC00349-201ENST00000448748 UQCR10Q9UDW1 63 aa3.7□□□□□ -1.82
LINC00349-201ENST00000448748 TRBV7-7A0A0K0K1E9 115 aa3.69□□□□□ -1.82
LINC00349-201ENST00000448748 F8WEM9 126 aa3.69□□□□□ -1.82
LINC00349-201ENST00000448748 OBSCNQ5VST9 7968 aa3.69□□□□□ -1.82
LINC00349-201ENST00000448748 K7ERJ3 54 aa3.68□□□□□ -1.82
LINC00349-201ENST00000448748 A0A0U1RQV1 116 aa3.67□□□□□ -1.82
LINC00349-201ENST00000448748 SMIM6P0DI80 62 aa3.67□□□□□ -1.82
LINC00349-201ENST00000448748 H3BUT2 72 aa3.66□□□□□ -1.82
LINC00349-201ENST00000448748 TCL1BO95988 128 aa3.66□□□□□ -1.82
LINC00349-201ENST00000448748 KRTAP19-2Q3LHN2 52 aa3.66□□□□□ -1.82
LINC00349-201ENST00000448748 SNHG12Q9BXW3 62 aa3.65□□□□□ -1.83
LINC00349-201ENST00000448748 H3BQ85 93 aa3.64□□□□□ -1.83
LINC00349-201ENST00000448748 LST1O00453 97 aa3.64□□□□□ -1.83
LINC00349-201ENST00000448748 SNCGO76070 127 aa3.64□□□□□ -1.83
LINC00349-201ENST00000448748 TRACP01848 142 aa3.64□□□□□ -1.83
LINC00349-201ENST00000448748 TEN1Q86WV5 123 aa3.64□□□□□ -1.83
LINC00349-201ENST00000448748 Q96NJ1 140 aa3.64□□□□□ -1.83
LINC00349-201ENST00000448748 A0A1W2PNM2 257 aa3.63□□□□□ -1.83
LINC00349-201ENST00000448748 C9orf92A6NGG3 77 aa3.63□□□□□ -1.83
LINC00349-201ENST00000448748 H3BMG7 143 aa3.63□□□□□ -1.83
LINC00349-201ENST00000448748 RPL37P61927 97 aaKnown RBP3.63□□□□□ -1.83
LINC00349-201ENST00000448748 COX6CP09669 75 aa3.62□□□□□ -1.83
LINC00349-201ENST00000448748 ORMDL1Q9P0S3 153 aa3.62□□□□□ -1.83
LINC00349-201ENST00000448748 SS18L2Q9UHA2 77 aa3.62□□□□□ -1.83
LINC00349-201ENST00000448748 TRBV7-4A0A0J9YYF1 115 aa3.61□□□□□ -1.83
LINC00349-201ENST00000448748 LOC105371267A0A1B0GV96 52 aa3.61□□□□□ -1.83
LINC00349-201ENST00000448748 TMEM256-PLSCR3K7ERE1 68 aa3.61□□□□□ -1.83
LINC00349-201ENST00000448748 DNAL4O96015 105 aa3.61□□□□□ -1.83
LINC00349-201ENST00000448748 PCOTHQ58A44 107 aa3.61□□□□□ -1.83
LINC00349-201ENST00000448748 KRTAP4-3Q9BYR4 195 aa3.61□□□□□ -1.83
LINC00349-201ENST00000448748 A0A087WSZ3 146 aa3.6□□□□□ -1.83
LINC00349-201ENST00000448748 M0R143 59 aa3.6□□□□□ -1.83
LINC00349-201ENST00000448748 FABP2P12104 132 aa3.6□□□□□ -1.83
LINC00349-201ENST00000448748 PSMB2P49721 201 aa3.6□□□□□ -1.83
LINC00349-201ENST00000448748 PRO0461Q9UI25 63 aa3.59□□□□□ -1.83
LINC00349-201ENST00000448748 C20orf166-AS1Q96NR2 134 aa3.58□□□□□ -1.84
LINC00349-201ENST00000448748 LINC00472Q9H8W2 130 aa3.58□□□□□ -1.84
LINC00349-201ENST00000448748 A8MUU9 505 aa3.57□□□□□ -1.84
LINC00349-201ENST00000448748 ANKRD29Q8N6D5 301 aa3.57□□□□□ -1.84
LINC00349-201ENST00000448748 OBSCN-AS1Q96MR7 158 aa3.57□□□□□ -1.84
LINC00349-201ENST00000448748 TSTD3H0UI37 97 aa3.56□□□□□ -1.84
LINC00349-201ENST00000448748 CCKP06307 115 aa3.56□□□□□ -1.84
LINC00349-201ENST00000448748 MT1HP80294 61 aa3.55□□□□□ -1.84
LINC00349-201ENST00000448748 LOC110117498A0A087WWA1 95 aa3.54□□□□□ -1.84
LINC00349-201ENST00000448748 BAALC-AS2P0C853 105 aa3.54□□□□□ -1.84
LINC00349-201ENST00000448748 SCGB1C2P0DMR2 95 aa3.54□□□□□ -1.84
LINC00349-201ENST00000448748 RBM3P98179 157 aaKnown RBP3.54□□□□□ -1.84
LINC00349-201ENST00000448748 ATXN8Q156A1 80 aa3.54□□□□□ -1.84
LINC00349-201ENST00000448748 NAA38Q9BRA0 125 aaKnown RBP3.54□□□□□ -1.84
LINC00349-201ENST00000448748 TRBV20-1A0A075B6N2 111 aa3.53□□□□□ -1.84
LINC00349-201ENST00000448748 A0A1B0GV72 72 aa3.53□□□□□ -1.84
LINC00349-201ENST00000448748 A0A1B0GW54 56 aa3.53□□□□□ -1.84
LINC00349-201ENST00000448748 Q6ZQT0 140 aa3.53□□□□□ -1.84
LINC00349-201ENST00000448748 TAX1BP3O14907 124 aa3.52□□□□□ -1.85
LINC00349-201ENST00000448748 LYRM7Q5U5X0 104 aa3.52□□□□□ -1.85
LINC00349-201ENST00000448748 DSCR8Q96T75 97 aa3.52□□□□□ -1.85
LINC00349-201ENST00000448748 C9JAW5 83 aa3.51□□□□□ -1.85
LINC00349-201ENST00000448748 JMJD7-PLA2G4BH0Y9G9 81 aa3.51□□□□□ -1.85
LINC00349-201ENST00000448748 IGKV4-1P06312 121 aa3.51□□□□□ -1.85
LINC00349-201ENST00000448748 SIGMAR1Q99720 223 aa3.51□□□□□ -1.85
LINC00349-201ENST00000448748 A0A1W2PPM0 123 aa3.5□□□□□ -1.85
LINC00349-201ENST00000448748 PDE6GP18545 87 aa3.5□□□□□ -1.85
LINC00349-201ENST00000448748 ATP11AUNQ6ZP68 121 aa3.5□□□□□ -1.85
LINC00349-201ENST00000448748 FSIP2Q5CZC0 6907 aa3.49□□□□□ -1.85
LINC00349-201ENST00000448748 A0A1B0GVX0 72 aa3.49□□□□□ -1.85
LINC00349-201ENST00000448748 H3BT86 120 aa3.49□□□□□ -1.85
LINC00349-201ENST00000448748 LINC00313P59037 77 aa3.49□□□□□ -1.85
LINC00349-201ENST00000448748 C8orf87E5RJ46 101 aa3.48□□□□□ -1.85
LINC00349-201ENST00000448748 J3KT08 172 aa3.48□□□□□ -1.85
LINC00349-201ENST00000448748 BATFQ16520 125 aa3.48□□□□□ -1.85
LINC00349-201ENST00000448748 DEFB116Q30KQ4 102 aa3.48□□□□□ -1.85
LINC00349-201ENST00000448748 VPS25Q9BRG1 176 aa3.47□□□□□ -1.85
LINC00349-201ENST00000448748 C14orf132Q9NPU4 83 aa3.47□□□□□ -1.85
LINC00349-201ENST00000448748 IGHV6-1A0A0B4J1U7 121 aa3.46□□□□□ -1.86
LINC00349-201ENST00000448748 CXCL6P80162 114 aa3.46□□□□□ -1.86
LINC00349-201ENST00000448748 KRTAP5-5Q701N2 237 aaPredicted RBP3.46□□□□□ -1.86
LINC00349-201ENST00000448748 A8MWP4 228 aa3.45□□□□□ -1.86
LINC00349-201ENST00000448748 IGKV3D-7A0A0C4DH55 119 aa3.44□□□□□ -1.86
LINC00349-201ENST00000448748 HRES1P13985 223 aa3.44□□□□□ -1.86
LINC00349-201ENST00000448748 COL5A1-AS1Q5SY13 56 aa3.43□□□□□ -1.86
LINC00349-201ENST00000448748 MTURNQ8N3F0 131 aa3.43□□□□□ -1.86
LINC00349-201ENST00000448748 COX6B2Q6YFQ2 88 aa3.42□□□□□ -1.86
LINC00349-201ENST00000448748 PRR15Q8IV56 129 aa3.42□□□□□ -1.86
LINC00349-201ENST00000448748 C8orf17Q9NRJ1 99 aa3.42□□□□□ -1.86
LINC00349-201ENST00000448748 SPCS1Q9Y6A9 102 aa3.42□□□□□ -1.86
LINC00349-201ENST00000448748 USH2AO75445 5202 aa3.42□□□□□ -1.86
LINC00349-201ENST00000448748 MMP24-AS1A0A0U1RRL7 71 aa3.41□□□□□ -1.86
LINC00349-201ENST00000448748 NDUFB1O75438 58 aa3.41□□□□□ -1.86
LINC00349-201ENST00000448748 ZCCHC13Q8WW36 166 aaKnown RBP3.41□□□□□ -1.86
LINC00349-201ENST00000448748 SSPOA2VEC9 5147 aa3.4□□□□□ -1.87
LINC00349-201ENST00000448748 K7EP34 96 aa3.4□□□□□ -1.87
LINC00349-201ENST00000448748 K7EQZ3 153 aa3.39□□□□□ -1.87
LINC00349-201ENST00000448748 NREPQ16612 68 aa3.39□□□□□ -1.87
LINC00349-201ENST00000448748 TMEM254Q8TBM7 123 aa3.38□□□□□ -1.87
LINC00349-201ENST00000448748 M0R2T5 61 aa3.36□□□□□ -1.87
LINC00349-201ENST00000448748 SPINK7P58062 85 aa3.36□□□□□ -1.87
LINC00349-201ENST00000448748 MRPL34Q9BQ48 92 aaKnown RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 248.2 ms