RNA–Protein interactions for RNA: ENST00000448572.1

SSBP3-209, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 454 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-209ENST00000448572 COX6CP09669 75 aa4.94□□□□□ -1.62
SSBP3-209ENST00000448572 WFDC13Q8IUB5 93 aa4.94□□□□□ -1.62
SSBP3-209ENST00000448572 Q8N9P0 234 aaPredicted RBP4.94□□□□□ -1.62
SSBP3-209ENST00000448572 HIST1H2BLQ99880 126 aa4.93□□□□□ -1.62
SSBP3-209ENST00000448572 HIGD1BQ9P298 99 aa4.93□□□□□ -1.62
SSBP3-209ENST00000448572 S100A6P06703 90 aa4.92□□□□□ -1.62
SSBP3-209ENST00000448572 HIST3H2BBQ8N257 126 aa4.91□□□□□ -1.62
SSBP3-209ENST00000448572 UBE2V1Q13404 147 aa4.9□□□□□ -1.63
SSBP3-209ENST00000448572 VPS25Q9BRG1 176 aa4.9□□□□□ -1.63
SSBP3-209ENST00000448572 A0A1B0GV72 72 aa4.89□□□□□ -1.63
SSBP3-209ENST00000448572 PSMB2P49721 201 aa4.89□□□□□ -1.63
SSBP3-209ENST00000448572 TRIAP1O43715 76 aa4.88□□□□□ -1.63
SSBP3-209ENST00000448572 RBM3P98179 157 aaKnown RBP4.88□□□□□ -1.63
SSBP3-209ENST00000448572 CEND1Q8N111 149 aa4.88□□□□□ -1.63
SSBP3-209ENST00000448572 H1FX-AS1Q4G0G2 97 aa4.87□□□□□ -1.63
SSBP3-209ENST00000448572 S100A1P23297 94 aa4.86□□□□□ -1.63
SSBP3-209ENST00000448572 IGKV3D-7A0A0C4DH55 119 aa4.85□□□□□ -1.63
SSBP3-209ENST00000448572 A0A1B0GW54 56 aa4.85□□□□□ -1.63
SSBP3-209ENST00000448572 C14orf144Q96I85 54 aa4.85□□□□□ -1.63
SSBP3-209ENST00000448572 C9JAW5 83 aa4.84□□□□□ -1.63
SSBP3-209ENST00000448572 A6NN06 94 aa4.83□□□□□ -1.64
SSBP3-209ENST00000448572 SPATA45Q537H7 98 aa4.82□□□□□ -1.64
SSBP3-209ENST00000448572 VAMP8Q9BV40 100 aa4.82□□□□□ -1.64
SSBP3-209ENST00000448572 C8orf17Q9NRJ1 99 aa4.82□□□□□ -1.64
SSBP3-209ENST00000448572 KRTAP20-1Q3LI63 56 aa4.81□□□□□ -1.64
SSBP3-209ENST00000448572 Q6ZQT0 140 aa4.81□□□□□ -1.64
SSBP3-209ENST00000448572 C2orf91Q6ZV80 131 aa4.81□□□□□ -1.64
SSBP3-209ENST00000448572 Q6ZVQ6 151 aa4.81□□□□□ -1.64
SSBP3-209ENST00000448572 PAM16Q9Y3D7 125 aa4.81□□□□□ -1.64
SSBP3-209ENST00000448572 NEBP20929 6669 aa4.8□□□□□ -1.64
SSBP3-209ENST00000448572 FXYD2P54710 66 aa4.79□□□□□ -1.64
SSBP3-209ENST00000448572 FAM236AA0A1B0GUQ0 79 aa4.78□□□□□ -1.64
SSBP3-209ENST00000448572 FAM236BA0A1B0GV22 79 aa4.78□□□□□ -1.64
SSBP3-209ENST00000448572 SCGB1C2P0DMR2 95 aa4.78□□□□□ -1.64
SSBP3-209ENST00000448572 PDE6GP18545 87 aa4.78□□□□□ -1.64
SSBP3-209ENST00000448572 JMJD7-PLA2G4BH0Y9G9 81 aa4.77□□□□□ -1.65
SSBP3-209ENST00000448572 HSD52Q0P140 79 aa4.76□□□□□ -1.65
SSBP3-209ENST00000448572 Q5VV11 94 aa4.76□□□□□ -1.65
SSBP3-209ENST00000448572 C7orf65Q6ZTY9 151 aa4.76□□□□□ -1.65
SSBP3-209ENST00000448572 TMEM254Q8TBM7 123 aa4.76□□□□□ -1.65
SSBP3-209ENST00000448572 MRPL34Q9BQ48 92 aaKnown RBP4.76□□□□□ -1.65
SSBP3-209ENST00000448572 NDUFS5O43920 106 aa4.75□□□□□ -1.65
SSBP3-209ENST00000448572 PRR15Q8IV56 129 aa4.74□□□□□ -1.65
SSBP3-209ENST00000448572 BAALC-AS2P0C853 105 aa4.73□□□□□ -1.65
SSBP3-209ENST00000448572 IGKV2D-30A0A075B6S6 120 aa4.72□□□□□ -1.65
SSBP3-209ENST00000448572 IGKV2-30P06310 120 aa4.72□□□□□ -1.65
SSBP3-209ENST00000448572 NREPQ16612 68 aa4.72□□□□□ -1.65
SSBP3-209ENST00000448572 LOC110117498A0A087WWA1 95 aa4.71□□□□□ -1.66
SSBP3-209ENST00000448572 hDV103S1A0JD37 113 aa4.71□□□□□ -1.66
SSBP3-209ENST00000448572 K7ERJ3 54 aa4.7□□□□□ -1.66
SSBP3-209ENST00000448572 MUC12Q9UKN1 5478 aa4.68□□□□□ -1.66
SSBP3-209ENST00000448572 KRTAP5-9P26371 169 aa4.68□□□□□ -1.66
SSBP3-209ENST00000448572 ATXN8Q156A1 80 aa4.68□□□□□ -1.66
SSBP3-209ENST00000448572 CSAG1Q6PB30 78 aa4.68□□□□□ -1.66
SSBP3-209ENST00000448572 MMP24-AS1A0A0U1RRL7 71 aa4.67□□□□□ -1.66
SSBP3-209ENST00000448572 IMUPQ9GZP8 106 aa4.67□□□□□ -1.66
SSBP3-209ENST00000448572 KRTAP10-5P60370 271 aa4.66□□□□□ -1.66
SSBP3-209ENST00000448572 C5orf47Q569G3 176 aa4.66□□□□□ -1.66
SSBP3-209ENST00000448572 SPRR2GQ9BYE4 73 aa4.66□□□□□ -1.66
SSBP3-209ENST00000448572 KRTAP19-8Q3LI54 63 aa4.65□□□□□ -1.67
SSBP3-209ENST00000448572 MT1BP07438 61 aa4.64□□□□□ -1.67
SSBP3-209ENST00000448572 S4R3F8 94 aa4.64□□□□□ -1.67
SSBP3-209ENST00000448572 KRTAP2-3P0C7H8 128 aa4.63□□□□□ -1.67
SSBP3-209ENST00000448572 C4orf26Q17RF5 130 aa4.63□□□□□ -1.67
SSBP3-209ENST00000448572 KRTAP2-4Q9BYR9 128 aa4.63□□□□□ -1.67
SSBP3-209ENST00000448572 CXCL6P80162 114 aa4.62□□□□□ -1.67
SSBP3-209ENST00000448572 UQCR10Q9UDW1 63 aa4.62□□□□□ -1.67
SSBP3-209ENST00000448572 K7EQZ3 153 aa4.61□□□□□ -1.67
SSBP3-209ENST00000448572 C14orf132Q9NPU4 83 aa4.61□□□□□ -1.67
SSBP3-209ENST00000448572 BPY2O14599 106 aa4.6□□□□□ -1.67
SSBP3-209ENST00000448572 KLKP1Q107X0 134 aa4.6□□□□□ -1.67
SSBP3-209ENST00000448572 CRIPTQ9P021 101 aa4.6□□□□□ -1.67
SSBP3-209ENST00000448572 CASC2Q6XLA1 102 aa4.59□□□□□ -1.67
SSBP3-209ENST00000448572 HCG22E2RYF7 251 aa4.58□□□□□ -1.68
SSBP3-209ENST00000448572 Q5W150 140 aa4.57□□□□□ -1.68
SSBP3-209ENST00000448572 KMT2DO14686 5537 aa4.56□□□□□ -1.68
SSBP3-209ENST00000448572 M0R143 59 aa4.55□□□□□ -1.68
SSBP3-209ENST00000448572 C1orf64Q8NEQ6 169 aa4.55□□□□□ -1.68
SSBP3-209ENST00000448572 LCA10Q71F78 164 aa4.54□□□□□ -1.68
SSBP3-209ENST00000448572 MDN1Q9NU22 5596 aa4.53□□□□□ -1.68
SSBP3-209ENST00000448572 PRO2289Q9P1D8 64 aa4.53□□□□□ -1.68
SSBP3-209ENST00000448572 PYY3Q5JQD4 70 aa4.52□□□□□ -1.69
SSBP3-209ENST00000448572 TSTD3H0UI37 97 aa4.49□□□□□ -1.69
SSBP3-209ENST00000448572 SPRR2EP22531 72 aa4.49□□□□□ -1.69
SSBP3-209ENST00000448572 SPRR2BP35325 72 aa4.49□□□□□ -1.69
SSBP3-209ENST00000448572 SPRR2AP35326 72 aa4.49□□□□□ -1.69
SSBP3-209ENST00000448572 SPRR2FQ96RM1 72 aa4.49□□□□□ -1.69
SSBP3-209ENST00000448572 H3BT86 120 aa4.48□□□□□ -1.69
SSBP3-209ENST00000448572 TP53AIP1Q9HCN2 124 aa4.48□□□□□ -1.69
SSBP3-209ENST00000448572 KRTAP2-2Q9BYT5 123 aa4.47□□□□□ -1.69
SSBP3-209ENST00000448572 KRTAP2-1Q9BYU5 128 aa4.47□□□□□ -1.69
SSBP3-209ENST00000448572 KRTAP3-1Q9BYR8 98 aa4.46□□□□□ -1.7
SSBP3-209ENST00000448572 SMCPP49901 116 aaPredicted RBP4.45□□□□□ -1.7
SSBP3-209ENST00000448572 Q8N9L7 120 aa4.45□□□□□ -1.7
SSBP3-209ENST00000448572 NAA38Q9BRA0 125 aaKnown RBP4.45□□□□□ -1.7
SSBP3-209ENST00000448572 UBL5Q9BZL1 73 aa4.44□□□□□ -1.7
SSBP3-209ENST00000448572 LOC105371267A0A1B0GV96 52 aa4.43□□□□□ -1.7
SSBP3-209ENST00000448572 KRTAP8-1Q8IUC2 63 aa4.42□□□□□ -1.7
SSBP3-209ENST00000448572 H0YAA0 97 aa4.4□□□□□ -1.71
SSBP3-209ENST00000448572 NDUFC1O43677 76 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 326.2 ms