RNA–Protein interactions for RNA: ENST00000448497.1

RFC4-209, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-209ENST00000448497 SPINK6Q6UWN8 80 aa4.08□□□□□ -1.76
RFC4-209ENST00000448497 Q5XG85 94 aa4.07□□□□□ -1.76
RFC4-209ENST00000448497 ANAPC11Q9NYG5 84 aa4.07□□□□□ -1.76
RFC4-209ENST00000448497 KMT2CQ8NEZ4 4911 aaKnown RBP4.07□□□□□ -1.76
RFC4-209ENST00000448497 TRAV7A0A075B6U4 112 aa4.06□□□□□ -1.76
RFC4-209ENST00000448497 A8MWP4 228 aa4.06□□□□□ -1.76
RFC4-209ENST00000448497 Q96NJ1 140 aa4.06□□□□□ -1.76
RFC4-209ENST00000448497 K7EQZ3 153 aa4.05□□□□□ -1.76
RFC4-209ENST00000448497 KRTAP10-4P60372 401 aaPredicted RBP4.05□□□□□ -1.76
RFC4-209ENST00000448497 KRTAP13-2Q52LG2 175 aa4.05□□□□□ -1.76
RFC4-209ENST00000448497 PRR15Q8IV56 129 aa4.05□□□□□ -1.76
RFC4-209ENST00000448497 Q8N9L7 120 aa4.05□□□□□ -1.76
RFC4-209ENST00000448497 A0A087X002 238 aa4.04□□□□□ -1.76
RFC4-209ENST00000448497 CCDC179H3BU77 68 aa4.04□□□□□ -1.76
RFC4-209ENST00000448497 APOBP04114 4563 aaKnown RBP4.04□□□□□ -1.76
RFC4-209ENST00000448497 KRTAP29-1A8MX34 341 aaPredicted RBP4.03□□□□□ -1.76
RFC4-209ENST00000448497 HCG22E2RYF7 251 aa4.03□□□□□ -1.76
RFC4-209ENST00000448497 MPLKIPQ8TAP9 179 aa4.03□□□□□ -1.76
RFC4-209ENST00000448497 OCR1Q9BZK8 76 aa4.03□□□□□ -1.76
RFC4-209ENST00000448497 NDUFB1O75438 58 aa4.02□□□□□ -1.77
RFC4-209ENST00000448497 CDK2AP2O75956 126 aa4.02□□□□□ -1.77
RFC4-209ENST00000448497 RPS29P62273 56 aaKnown RBP4.02□□□□□ -1.77
RFC4-209ENST00000448497 PKHD1L1Q86WI1 4243 aa4.02□□□□□ -1.77
RFC4-209ENST00000448497 DEFB116Q30KQ4 102 aa4.01□□□□□ -1.77
RFC4-209ENST00000448497 SPINK1P00995 79 aa4□□□□□ -1.77
RFC4-209ENST00000448497 KLKP1Q107X0 134 aa4□□□□□ -1.77
RFC4-209ENST00000448497 HRCT1Q6UXD1 115 aa4□□□□□ -1.77
RFC4-209ENST00000448497 LIMD2Q9BT23 127 aa4□□□□□ -1.77
RFC4-209ENST00000448497 MMP24-AS1A0A0U1RRL7 71 aa3.99□□□□□ -1.77
RFC4-209ENST00000448497 A0A1B0GVX0 72 aa3.99□□□□□ -1.77
RFC4-209ENST00000448497 SPAG11AQ6PDA7 123 aa3.99□□□□□ -1.77
RFC4-209ENST00000448497 TYMSOSQ8TAI1 123 aa3.99□□□□□ -1.77
RFC4-209ENST00000448497 SMR3BP02814 79 aaPredicted RBP3.98□□□□□ -1.77
RFC4-209ENST00000448497 CASC2Q6XLA1 102 aa3.98□□□□□ -1.77
RFC4-209ENST00000448497 C5orf47Q569G3 176 aa3.97□□□□□ -1.77
RFC4-209ENST00000448497 C8orf17Q9NRJ1 99 aa3.97□□□□□ -1.77
RFC4-209ENST00000448497 hDV103S1A0JD37 113 aa3.96□□□□□ -1.78
RFC4-209ENST00000448497 C8orf87E5RJ46 101 aa3.96□□□□□ -1.78
RFC4-209ENST00000448497 NDUFC1O43677 76 aa3.96□□□□□ -1.78
RFC4-209ENST00000448497 C1orf195Q5TG92 126 aa3.96□□□□□ -1.78
RFC4-209ENST00000448497 WFDC13Q8IUB5 93 aa3.96□□□□□ -1.78
RFC4-209ENST00000448497 RYR3Q15413 4870 aa3.96□□□□□ -1.78
RFC4-209ENST00000448497 H3BPC8 53 aa3.95□□□□□ -1.78
RFC4-209ENST00000448497 C20orf197Q8N268 126 aa3.95□□□□□ -1.78
RFC4-209ENST00000448497 PRR26Q8N8Z3 221 aa3.95□□□□□ -1.78
RFC4-209ENST00000448497 LINC00304Q8N9R0 145 aa3.95□□□□□ -1.78
RFC4-209ENST00000448497 TMEM254Q8TBM7 123 aa3.95□□□□□ -1.78
RFC4-209ENST00000448497 TP53AIP1Q9HCN2 124 aa3.95□□□□□ -1.78
RFC4-209ENST00000448497 A0A0U1RQV1 116 aa3.94□□□□□ -1.78
RFC4-209ENST00000448497 TMEM258P61165 79 aa3.94□□□□□ -1.78
RFC4-209ENST00000448497 FAT1Q14517 4588 aa3.94□□□□□ -1.78
RFC4-209ENST00000448497 A0A0A0MQY5 61 aa3.93□□□□□ -1.78
RFC4-209ENST00000448497 IGHV6-1A0A0B4J1U7 121 aa3.93□□□□□ -1.78
RFC4-209ENST00000448497 ZCCHC13Q8WW36 166 aaKnown RBP3.93□□□□□ -1.78
RFC4-209ENST00000448497 MRPL34Q9BQ48 92 aaKnown RBP3.93□□□□□ -1.78
RFC4-209ENST00000448497 CYSTM1Q9H1C7 97 aa3.93□□□□□ -1.78
RFC4-209ENST00000448497 HSPG2P98160 4391 aa3.93□□□□□ -1.78
RFC4-209ENST00000448497 H7BZZ5 65 aa3.92□□□□□ -1.78
RFC4-209ENST00000448497 Q5VSD8 79 aa3.92□□□□□ -1.78
RFC4-209ENST00000448497 RYR1P21817 5038 aa3.92□□□□□ -1.78
RFC4-209ENST00000448497 IGKV2-30P06310 120 aa3.91□□□□□ -1.78
RFC4-209ENST00000448497 MP68P56378 58 aa3.91□□□□□ -1.78
RFC4-209ENST00000448497 ATP5EP56381 51 aaPredicted RBP3.9□□□□□ -1.79
RFC4-209ENST00000448497 LINC00313P59037 77 aa3.9□□□□□ -1.79
RFC4-209ENST00000448497 KRTAP10-8P60410 259 aa3.9□□□□□ -1.79
RFC4-209ENST00000448497 NOTCH2NLQ7Z3S9 236 aa3.9□□□□□ -1.79
RFC4-209ENST00000448497 TRAV22A0A0B4J277 110 aa3.89□□□□□ -1.79
RFC4-209ENST00000448497 Q8N9P0 234 aaPredicted RBP3.89□□□□□ -1.79
RFC4-209ENST00000448497 SNURFQ9Y675 71 aa3.89□□□□□ -1.79
RFC4-209ENST00000448497 FLG2Q5D862 2391 aaPredicted RBP3.88□□□□□ -1.79
RFC4-209ENST00000448497 KRTAP16-1A8MUX0 517 aa3.88□□□□□ -1.79
RFC4-209ENST00000448497 H0Y9P7 68 aa3.88□□□□□ -1.79
RFC4-209ENST00000448497 RPS28P62857 69 aaKnown RBP3.87□□□□□ -1.79
RFC4-209ENST00000448497 KRTAP13-3Q3SY46 172 aa3.87□□□□□ -1.79
RFC4-209ENST00000448497 FAM236DA0A1B0GTK5 79 aa3.85□□□□□ -1.79
RFC4-209ENST00000448497 FAM236CP0DP71 79 aa3.85□□□□□ -1.79
RFC4-209ENST00000448497 LINC00208Q96KT6 92 aa3.85□□□□□ -1.79
RFC4-209ENST00000448497 KRTAP17-1Q9BYP8 105 aa3.85□□□□□ -1.79
RFC4-209ENST00000448497 TNXBP22105 4242 aa3.84□□□□□ -1.79
RFC4-209ENST00000448497 LOC101927531A0A1B0GV80 90 aa3.84□□□□□ -1.79
RFC4-209ENST00000448497 NDUFS5O43920 106 aa3.84□□□□□ -1.79
RFC4-209ENST00000448497 SPANXA2-OT1Q8N9U9 137 aa3.84□□□□□ -1.79
RFC4-209ENST00000448497 C1orf64Q8NEQ6 169 aa3.84□□□□□ -1.79
RFC4-209ENST00000448497 FP248Q71RG6 208 aaPredicted RBP3.83□□□□□ -1.8
RFC4-209ENST00000448497 KIAA1109Q2LD37 5005 aa3.82□□□□□ -1.8
RFC4-209ENST00000448497 FAT3Q8TDW7 4589 aa3.82□□□□□ -1.8
RFC4-209ENST00000448497 OXTP01178 125 aa3.82□□□□□ -1.8
RFC4-209ENST00000448497 CYP4F30PQ9H0H9 118 aa3.82□□□□□ -1.8
RFC4-209ENST00000448497 SERP1Q9Y6X1 66 aa3.82□□□□□ -1.8
RFC4-209ENST00000448497 MT1HL1P0DM35 61 aa3.81□□□□□ -1.8
RFC4-209ENST00000448497 Q5W150 140 aa3.81□□□□□ -1.8
RFC4-209ENST00000448497 C20orf166-AS1Q96NR2 134 aa3.81□□□□□ -1.8
RFC4-209ENST00000448497 EPPK1P58107 5090 aaKnown RBP3.8□□□□□ -1.8
RFC4-209ENST00000448497 A8MUU9 505 aa3.8□□□□□ -1.8
RFC4-209ENST00000448497 LRP1Q07954 4544 aaKnown RBP3.8□□□□□ -1.8
RFC4-209ENST00000448497 DMBT1Q9UGM3 2413 aaPredicted RBP3.78□□□□□ -1.8
RFC4-209ENST00000448497 IGLV7-46A0A075B6I9 117 aa3.78□□□□□ -1.8
RFC4-209ENST00000448497 Q75L30 129 aa3.76□□□□□ -1.81
RFC4-209ENST00000448497 RETNLBQ9BQ08 111 aa3.75□□□□□ -1.81
RFC4-209ENST00000448497 PCOTHQ58A44 107 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms