RNA–Protein interactions for RNA: ENST00000446225.5

MCF2-206, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-206ENST00000446225 ANAPC11Q9NYG5 84 aa3.64□□□□□ -1.83
MCF2-206ENST00000446225 RYR1P21817 5038 aa3.64□□□□□ -1.83
MCF2-206ENST00000446225 IGHV3-64A0A075B6Q5 118 aa3.63□□□□□ -1.83
MCF2-206ENST00000446225 TRAV22A0A0B4J277 110 aa3.63□□□□□ -1.83
MCF2-206ENST00000446225 C3orf79P0CE67 100 aa3.63□□□□□ -1.83
MCF2-206ENST00000446225 R4GN34 69 aa3.63□□□□□ -1.83
MCF2-206ENST00000446225 DNAH8Q96JB1 4490 aa3.63□□□□□ -1.83
MCF2-206ENST00000446225 ERC2-IT1O76042 136 aa3.62□□□□□ -1.83
MCF2-206ENST00000446225 KRTAP1-4P0C5Y4 121 aa3.62□□□□□ -1.83
MCF2-206ENST00000446225 P0C880 135 aa3.62□□□□□ -1.83
MCF2-206ENST00000446225 COX6A2Q02221 97 aa3.62□□□□□ -1.83
MCF2-206ENST00000446225 MOBPQ13875 183 aa3.62□□□□□ -1.83
MCF2-206ENST00000446225 AMELXQ99217 191 aa3.62□□□□□ -1.83
MCF2-206ENST00000446225 HERC2O95714 4834 aa3.62□□□□□ -1.83
MCF2-206ENST00000446225 UBE2D1P51668 147 aa3.62□□□□□ -1.83
MCF2-206ENST00000446225 BAGE3Q86Y29 109 aa3.62□□□□□ -1.83
MCF2-206ENST00000446225 APOBP04114 4563 aaKnown RBP3.62□□□□□ -1.83
MCF2-206ENST00000446225 Q5VV11 94 aa3.61□□□□□ -1.83
MCF2-206ENST00000446225 LIMD2Q9BT23 127 aa3.61□□□□□ -1.83
MCF2-206ENST00000446225 HIGD2AQ9BW72 106 aa3.61□□□□□ -1.83
MCF2-206ENST00000446225 C22orf24Q9Y442 160 aa3.61□□□□□ -1.83
MCF2-206ENST00000446225 GVQW2A0A096LPI5 108 aaPredicted RBP3.6□□□□□ -1.83
MCF2-206ENST00000446225 LINC01549A6NIU2 74 aa3.6□□□□□ -1.83
MCF2-206ENST00000446225 CNBPP62633 177 aaKnown RBP3.6□□□□□ -1.83
MCF2-206ENST00000446225 HAMPP81172 84 aa3.6□□□□□ -1.83
MCF2-206ENST00000446225 C9orf163Q8N9P6 203 aa3.6□□□□□ -1.83
MCF2-206ENST00000446225 HSPG2P98160 4391 aa3.59□□□□□ -1.83
MCF2-206ENST00000446225 COX6CP09669 75 aa3.59□□□□□ -1.83
MCF2-206ENST00000446225 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.59□□□□□ -1.83
MCF2-206ENST00000446225 TRAV23DV6A0A075B6W5 121 aa3.58□□□□□ -1.84
MCF2-206ENST00000446225 TEX49A0A1B0GTD5 131 aa3.58□□□□□ -1.84
MCF2-206ENST00000446225 CHKB-CPT1BH3BT56 60 aa3.58□□□□□ -1.84
MCF2-206ENST00000446225 SPAG11BQ08648 103 aa3.58□□□□□ -1.84
MCF2-206ENST00000446225 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
MCF2-206ENST00000446225 C20orf197Q8N268 126 aa3.58□□□□□ -1.84
MCF2-206ENST00000446225 CDKN2A-AS1Q9UH64 79 aa3.58□□□□□ -1.84
MCF2-206ENST00000446225 MYMXA0A1B0GTQ4 84 aa3.58□□□□□ -1.84
MCF2-206ENST00000446225 C2orf82Q6UX34 121 aa3.58□□□□□ -1.84
MCF2-206ENST00000446225 IFI27L1Q96BM0 104 aa3.58□□□□□ -1.84
MCF2-206ENST00000446225 F8WEM9 126 aa3.57□□□□□ -1.84
MCF2-206ENST00000446225 SFTA2Q6UW10 78 aa3.57□□□□□ -1.84
MCF2-206ENST00000446225 UNQ6190/PRO20217Q6UXQ8 127 aa3.57□□□□□ -1.84
MCF2-206ENST00000446225 Q6ZSA8 131 aa3.57□□□□□ -1.84
MCF2-206ENST00000446225 SMR3BP02814 79 aaPredicted RBP3.56□□□□□ -1.84
MCF2-206ENST00000446225 TRAV12-1A0A0B4J245 112 aa3.56□□□□□ -1.84
MCF2-206ENST00000446225 LEPROTL1O95214 131 aa3.56□□□□□ -1.84
MCF2-206ENST00000446225 TOMM7Q9P0U1 55 aa3.56□□□□□ -1.84
MCF2-206ENST00000446225 FAT1Q14517 4588 aa3.55□□□□□ -1.84
MCF2-206ENST00000446225 A0A096LNI7 61 aa3.55□□□□□ -1.84
MCF2-206ENST00000446225 A0A1W2PNM2 257 aa3.55□□□□□ -1.84
MCF2-206ENST00000446225 NDUFA1O15239 70 aa3.55□□□□□ -1.84
MCF2-206ENST00000446225 C6orf48Q9UBA6 75 aa3.55□□□□□ -1.84
MCF2-206ENST00000446225 IGKV2-24A0A0C4DH68 120 aa3.54□□□□□ -1.84
MCF2-206ENST00000446225 ZNF815PA8K554 130 aa3.54□□□□□ -1.84
MCF2-206ENST00000446225 A8MU10 97 aa3.54□□□□□ -1.84
MCF2-206ENST00000446225 COX7B2Q8TF08 81 aa3.54□□□□□ -1.84
MCF2-206ENST00000446225 ABCA13Q86UQ4 5058 aa3.54□□□□□ -1.84
MCF2-206ENST00000446225 Q8IZM0 81 aa3.54□□□□□ -1.84
MCF2-206ENST00000446225 SPACA4Q8TDM5 124 aa3.54□□□□□ -1.84
MCF2-206ENST00000446225 F8VRH5 84 aa3.53□□□□□ -1.84
MCF2-206ENST00000446225 HRES1P13985 223 aa3.53□□□□□ -1.84
MCF2-206ENST00000446225 VPS13BQ7Z7G8 4022 aa3.53□□□□□ -1.84
MCF2-206ENST00000446225 TRBV30A0A0K0K1B3 111 aa3.52□□□□□ -1.85
MCF2-206ENST00000446225 LOC101927531A0A1B0GV80 90 aa3.52□□□□□ -1.85
MCF2-206ENST00000446225 Q6JHZ5 121 aa3.52□□□□□ -1.85
MCF2-206ENST00000446225 LINC00167Q96N53 147 aa3.52□□□□□ -1.85
MCF2-206ENST00000446225 A0A1W2PNN7 141 aa3.52□□□□□ -1.85
MCF2-206ENST00000446225 PLAC8Q9NZF1 115 aa3.52□□□□□ -1.85
MCF2-206ENST00000446225 Q5VSD8 79 aa3.51□□□□□ -1.85
MCF2-206ENST00000446225 IGKV2-28A0A075B6P5 120 aa3.5□□□□□ -1.85
MCF2-206ENST00000446225 IGKV2D-28P01615 120 aa3.5□□□□□ -1.85
MCF2-206ENST00000446225 PLNP26678 52 aa3.5□□□□□ -1.85
MCF2-206ENST00000446225 CSAG1Q6PB30 78 aa3.5□□□□□ -1.85
MCF2-206ENST00000446225 KRTAP11-1Q8IUC1 163 aa3.5□□□□□ -1.85
MCF2-206ENST00000446225 ZNF625Q96I27 306 aaPredicted RBP3.5□□□□□ -1.85
MCF2-206ENST00000446225 SRRM2Q9UQ35 2752 aaKnown RBP3.5□□□□□ -1.85
MCF2-206ENST00000446225 PCLOQ9Y6V0 5065 aa3.5□□□□□ -1.85
MCF2-206ENST00000446225 KRTAP10-4P60372 401 aaPredicted RBP3.49□□□□□ -1.85
MCF2-206ENST00000446225 C1orf137Q5JT78 98 aa3.48□□□□□ -1.85
MCF2-206ENST00000446225 DMAC1Q96GE9 116 aa3.48□□□□□ -1.85
MCF2-206ENST00000446225 ELOF1P60002 83 aaKnown RBP3.48□□□□□ -1.85
MCF2-206ENST00000446225 RPL37AP61513 92 aaKnown RBP3.48□□□□□ -1.85
MCF2-206ENST00000446225 ATP5EP2Q5VTU8 51 aa3.48□□□□□ -1.85
MCF2-206ENST00000446225 PSORS1C2Q9UIG4 136 aa3.48□□□□□ -1.85
MCF2-206ENST00000446225 LINC00158P58513 81 aa3.47□□□□□ -1.85
MCF2-206ENST00000446225 COX17Q14061 63 aa3.46□□□□□ -1.86
MCF2-206ENST00000446225 KRTAP2-2Q9BYT5 123 aa3.45□□□□□ -1.86
MCF2-206ENST00000446225 PKHD1L1Q86WI1 4243 aa3.45□□□□□ -1.86
MCF2-206ENST00000446225 Q9BRP9 147 aa3.44□□□□□ -1.86
MCF2-206ENST00000446225 FLG2Q5D862 2391 aaPredicted RBP3.44□□□□□ -1.86
MCF2-206ENST00000446225 ATXN8Q156A1 80 aa3.43□□□□□ -1.86
MCF2-206ENST00000446225 MUSTN1Q8IVN3 82 aa3.42□□□□□ -1.86
MCF2-206ENST00000446225 MYCBP2O75592 4640 aa3.42□□□□□ -1.86
MCF2-206ENST00000446225 ORMDL1Q9P0S3 153 aa3.42□□□□□ -1.86
MCF2-206ENST00000446225 PRO2289Q9P1D8 64 aa3.42□□□□□ -1.86
MCF2-206ENST00000446225 SPAG11AQ6PDA7 123 aa3.41□□□□□ -1.86
MCF2-206ENST00000446225 LRP1Q07954 4544 aaKnown RBP3.41□□□□□ -1.86
MCF2-206ENST00000446225 FAT3Q8TDW7 4589 aa3.41□□□□□ -1.86
MCF2-206ENST00000446225 NCR3O14931 201 aa3.4□□□□□ -1.87
MCF2-206ENST00000446225 KRTAP13-2Q52LG2 175 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms