RNA–Protein interactions for RNA: ENST00000445561.5

TRO-215, Transcript of trophinin, humanhuman

TSL 1 (best)

Gene TRO, Length 2,597 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-215ENST00000445561 CDK2AP2O75956 126 aa7.48□□□□□ -1.21
TRO-215ENST00000445561 LY6G6CO95867 125 aa7.47□□□□□ -1.21
TRO-215ENST00000445561 SPINK6Q6UWN8 80 aa7.47□□□□□ -1.21
TRO-215ENST00000445561 IGLV7-43P04211 117 aa7.46□□□□□ -1.22
TRO-215ENST00000445561 TP53AIP1Q9HCN2 124 aa7.46□□□□□ -1.22
TRO-215ENST00000445561 CIRBP-AS1Q8TBR5 109 aa7.45□□□□□ -1.22
TRO-215ENST00000445561 CD164Q04900 197 aa7.44□□□□□ -1.22
TRO-215ENST00000445561 C1orf195Q5TG92 126 aa7.44□□□□□ -1.22
TRO-215ENST00000445561 MRPL34Q9BQ48 92 aaKnown RBP7.44□□□□□ -1.22
TRO-215ENST00000445561 A8MUN3 132 aa7.43□□□□□ -1.22
TRO-215ENST00000445561 IGLV7-46A0A075B6I9 117 aa7.42□□□□□ -1.22
TRO-215ENST00000445561 KRTAP10-2P60368 255 aa7.41□□□□□ -1.22
TRO-215ENST00000445561 COA5Q86WW8 74 aa7.4□□□□□ -1.22
TRO-215ENST00000445561 V9GYY9 64 aa7.4□□□□□ -1.22
TRO-215ENST00000445561 HYDINQ4G0P3 5121 aa7.4□□□□□ -1.23
TRO-215ENST00000445561 LRP1BQ9NZR2 4599 aa7.39□□□□□ -1.23
TRO-215ENST00000445561 Q8N9P0 234 aaPredicted RBP7.39□□□□□ -1.23
TRO-215ENST00000445561 Q5VV11 94 aa7.36□□□□□ -1.23
TRO-215ENST00000445561 Q5W150 140 aa7.35□□□□□ -1.23
TRO-215ENST00000445561 PKD1P98161 4303 aa7.35□□□□□ -1.23
TRO-215ENST00000445561 FAT2Q9NYQ8 4349 aa7.34□□□□□ -1.23
TRO-215ENST00000445561 PRR15LQ9BU68 103 aa7.34□□□□□ -1.23
TRO-215ENST00000445561 A8MU10 97 aa7.33□□□□□ -1.24
TRO-215ENST00000445561 SEC61GP60059 68 aa7.33□□□□□ -1.24
TRO-215ENST00000445561 VPS13BQ7Z7G8 4022 aa7.32□□□□□ -1.24
TRO-215ENST00000445561 KRTAP21-3Q3LHN1 58 aa7.32□□□□□ -1.24
TRO-215ENST00000445561 SSBP3-AS1Q7Z2R9 100 aa7.32□□□□□ -1.24
TRO-215ENST00000445561 LIMD2Q9BT23 127 aa7.32□□□□□ -1.24
TRO-215ENST00000445561 CHKB-CPT1BH3BT56 60 aa7.3□□□□□ -1.24
TRO-215ENST00000445561 KRTAP10-1P60331 282 aa7.3□□□□□ -1.24
TRO-215ENST00000445561 KRTAP13-2Q52LG2 175 aa7.3□□□□□ -1.24
TRO-215ENST00000445561 HRES1P13985 223 aa7.29□□□□□ -1.24
TRO-215ENST00000445561 KRTAP13-3Q3SY46 172 aa7.29□□□□□ -1.24
TRO-215ENST00000445561 SPAG11AQ6PDA7 123 aa7.28□□□□□ -1.24
TRO-215ENST00000445561 LOC101927531A0A1B0GV80 90 aa7.28□□□□□ -1.24
TRO-215ENST00000445561 RETNLBQ9BQ08 111 aa7.28□□□□□ -1.24
TRO-215ENST00000445561 LINC00313P59037 77 aa7.25□□□□□ -1.25
TRO-215ENST00000445561 Q6ZSA8 131 aa7.25□□□□□ -1.25
TRO-215ENST00000445561 PMAIP1Q13794 54 aa7.25□□□□□ -1.25
TRO-215ENST00000445561 C8orf87E5RJ46 101 aa7.24□□□□□ -1.25
TRO-215ENST00000445561 PKHD1P08F94 4074 aa7.23□□□□□ -1.25
TRO-215ENST00000445561 Q75L30 129 aa7.22□□□□□ -1.25
TRO-215ENST00000445561 A6NED7 52 aa7.21□□□□□ -1.25
TRO-215ENST00000445561 KRTAP1-4P0C5Y4 121 aa7.21□□□□□ -1.26
TRO-215ENST00000445561 PRR26Q8N8Z3 221 aa7.2□□□□□ -1.26
TRO-215ENST00000445561 LINC01558Q9Y6Z2 57 aa7.2□□□□□ -1.26
TRO-215ENST00000445561 LCA10Q71F78 164 aa7.18□□□□□ -1.26
TRO-215ENST00000445561 SPTSSBQ8NFR3 76 aa7.18□□□□□ -1.26
TRO-215ENST00000445561 FAM229AH3BQW9 127 aa7.17□□□□□ -1.26
TRO-215ENST00000445561 KRTAP16-1A8MUX0 517 aa7.16□□□□□ -1.26
TRO-215ENST00000445561 PLA2G1BP04054 148 aaKnown RBP7.15□□□□□ -1.26
TRO-215ENST00000445561 ACYP2P14621 99 aa7.14□□□□□ -1.27
TRO-215ENST00000445561 IGKV2-30P06310 120 aa7.13□□□□□ -1.27
TRO-215ENST00000445561 SPINK7P58062 85 aa7.12□□□□□ -1.27
TRO-215ENST00000445561 TYMSOSQ8TAI1 123 aa7.12□□□□□ -1.27
TRO-215ENST00000445561 DMAC1Q96GE9 116 aa7.12□□□□□ -1.27
TRO-215ENST00000445561 C4orf48Q5BLP8 95 aa7.11□□□□□ -1.27
TRO-215ENST00000445561 SACSQ9NZJ4 4579 aa7.1□□□□□ -1.27
TRO-215ENST00000445561 IGKV2D-30A0A075B6S6 120 aa7.1□□□□□ -1.27
TRO-215ENST00000445561 CDC42SE1Q9NRR8 79 aa7.09□□□□□ -1.28
TRO-215ENST00000445561 ATP11AUNQ6ZP68 121 aa7.06□□□□□ -1.28
TRO-215ENST00000445561 SPINK1P00995 79 aa7.05□□□□□ -1.28
TRO-215ENST00000445561 DYNC1H1Q14204 4646 aaKnown RBP7.04□□□□□ -1.28
TRO-215ENST00000445561 FAT1Q14517 4588 aa7.04□□□□□ -1.28
TRO-215ENST00000445561 SMR3BP02814 79 aaPredicted RBP7.04□□□□□ -1.28
TRO-215ENST00000445561 KTN1-AS1Q86SY8 53 aa7.01□□□□□ -1.29
TRO-215ENST00000445561 LINC00304Q8N9R0 145 aa7.01□□□□□ -1.29
TRO-215ENST00000445561 C7orf65Q6ZTY9 151 aa7□□□□□ -1.29
TRO-215ENST00000445561 A6NN06 94 aa6.98□□□□□ -1.29
TRO-215ENST00000445561 A0A1B0GU69 56 aa6.97□□□□□ -1.29
TRO-215ENST00000445561 APOBP04114 4563 aaKnown RBP6.95□□□□□ -1.3
TRO-215ENST00000445561 Q8N1X5 172 aa6.94□□□□□ -1.3
TRO-215ENST00000445561 C9orf92A6NGG3 77 aa6.93□□□□□ -1.3
TRO-215ENST00000445561 PKHD1L1Q86WI1 4243 aa6.93□□□□□ -1.3
TRO-215ENST00000445561 RBM12B-AS1Q9P1G2 102 aa6.93□□□□□ -1.3
TRO-215ENST00000445561 RPS29P62273 56 aaKnown RBP6.91□□□□□ -1.3
TRO-215ENST00000445561 KRTAP10-4P60372 401 aaPredicted RBP6.87□□□□□ -1.31
TRO-215ENST00000445561 A0A1B0GVY2 172 aa6.86□□□□□ -1.31
TRO-215ENST00000445561 KMT2CQ8NEZ4 4911 aaKnown RBP6.85□□□□□ -1.31
TRO-215ENST00000445561 RYR2Q92736 4967 aa6.85□□□□□ -1.31
TRO-215ENST00000445561 UQCR11O14957 56 aa6.83□□□□□ -1.32
TRO-215ENST00000445561 MIR22HGQ0VDD5 57 aa6.82□□□□□ -1.32
TRO-215ENST00000445561 SPATA8Q6RVD6 105 aa6.82□□□□□ -1.32
TRO-215ENST00000445561 C20orf166-AS1Q96NR2 134 aa6.82□□□□□ -1.32
TRO-215ENST00000445561 A8MUU9 505 aa6.81□□□□□ -1.32
TRO-215ENST00000445561 LRP1Q07954 4544 aaKnown RBP6.78□□□□□ -1.32
TRO-215ENST00000445561 KRTAP3-1Q9BYR8 98 aa6.77□□□□□ -1.33
TRO-215ENST00000445561 FLG2Q5D862 2391 aaPredicted RBP6.75□□□□□ -1.33
TRO-215ENST00000445561 PRAC1Q96KF2 57 aa6.74□□□□□ -1.33
TRO-215ENST00000445561 ADM2Q7Z4H4 148 aa6.73□□□□□ -1.33
TRO-215ENST00000445561 TNXBP22105 4242 aa6.72□□□□□ -1.33
TRO-215ENST00000445561 FAT3Q8TDW7 4589 aa6.71□□□□□ -1.33
TRO-215ENST00000445561 HSPG2P98160 4391 aa6.68□□□□□ -1.34
TRO-215ENST00000445561 MYCBP2O75592 4640 aa6.66□□□□□ -1.34
TRO-215ENST00000445561 H0YAA0 97 aa6.64□□□□□ -1.35
TRO-215ENST00000445561 DMBT1Q9UGM3 2413 aaPredicted RBP6.62□□□□□ -1.35
TRO-215ENST00000445561 COX6B2Q6YFQ2 88 aa6.61□□□□□ -1.35
TRO-215ENST00000445561 RYR3Q15413 4870 aa6.61□□□□□ -1.35
TRO-215ENST00000445561 A0A1B0GU33 70 aa6.6□□□□□ -1.35
TRO-215ENST00000445561 Q5VSD8 79 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms