RNA–Protein interactions for RNA: ENST00000445357.1

NCLP1-201, Transcript of nucleolin pseudogene 1, humanhuman

BASIC

Gene NCLP1, Length 1,963 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP1-201ENST00000445357 SSBP3-AS1Q7Z2R9 100 aa8.34□□□□□ -1.07
NCLP1-201ENST00000445357 FAT2Q9NYQ8 4349 aa8.34□□□□□ -1.08
NCLP1-201ENST00000445357 FP248Q71RG6 208 aaPredicted RBP8.33□□□□□ -1.08
NCLP1-201ENST00000445357 CYP4F30PQ9H0H9 118 aa8.33□□□□□ -1.08
NCLP1-201ENST00000445357 C4orf26Q17RF5 130 aa8.33□□□□□ -1.08
NCLP1-201ENST00000445357 CDK2AP2O75956 126 aa8.32□□□□□ -1.08
NCLP1-201ENST00000445357 TP53AIP1Q9HCN2 124 aa8.32□□□□□ -1.08
NCLP1-201ENST00000445357 PKD1P98161 4303 aa8.32□□□□□ -1.08
NCLP1-201ENST00000445357 IGHV6-1A0A0B4J1U7 121 aa8.3□□□□□ -1.08
NCLP1-201ENST00000445357 FAM229BQ4G0N7 80 aa8.29□□□□□ -1.08
NCLP1-201ENST00000445357 C1orf64Q8NEQ6 169 aa8.29□□□□□ -1.08
NCLP1-201ENST00000445357 EPPK1P58107 5090 aaKnown RBP8.28□□□□□ -1.08
NCLP1-201ENST00000445357 SPANXA2-OT1Q8N9U9 137 aa8.28□□□□□ -1.08
NCLP1-201ENST00000445357 MRPL34Q9BQ48 92 aaKnown RBP8.27□□□□□ -1.09
NCLP1-201ENST00000445357 LRP1BQ9NZR2 4599 aa8.26□□□□□ -1.09
NCLP1-201ENST00000445357 A0A087X002 238 aa8.24□□□□□ -1.09
NCLP1-201ENST00000445357 KRTAP13-2Q52LG2 175 aa8.24□□□□□ -1.09
NCLP1-201ENST00000445357 NOTCH2NLQ7Z3S9 236 aa8.24□□□□□ -1.09
NCLP1-201ENST00000445357 PRR4Q16378 134 aa8.22□□□□□ -1.09
NCLP1-201ENST00000445357 SPINK6Q6UWN8 80 aa8.22□□□□□ -1.09
NCLP1-201ENST00000445357 NDUFS5O43920 106 aa8.21□□□□□ -1.1
NCLP1-201ENST00000445357 KRTAP1-4P0C5Y4 121 aa8.21□□□□□ -1.1
NCLP1-201ENST00000445357 C8orf87E5RJ46 101 aa8.2□□□□□ -1.1
NCLP1-201ENST00000445357 IGLV7-46A0A075B6I9 117 aa8.16□□□□□ -1.1
NCLP1-201ENST00000445357 MPLKIPQ8TAP9 179 aa8.16□□□□□ -1.1
NCLP1-201ENST00000445357 BIRC6Q9NR09 4857 aa8.15□□□□□ -1.1
NCLP1-201ENST00000445357 C1orf195Q5TG92 126 aa8.15□□□□□ -1.11
NCLP1-201ENST00000445357 KRTAP13-3Q3SY46 172 aa8.14□□□□□ -1.11
NCLP1-201ENST00000445357 Q1T7F1 81 aa8.13□□□□□ -1.11
NCLP1-201ENST00000445357 LIMD2Q9BT23 127 aa8.12□□□□□ -1.11
NCLP1-201ENST00000445357 LINC00336Q6ZUF6 198 aa8.11□□□□□ -1.11
NCLP1-201ENST00000445357 LOC101927531A0A1B0GV80 90 aa8.11□□□□□ -1.11
NCLP1-201ENST00000445357 PCOTHQ58A44 107 aa8.11□□□□□ -1.11
NCLP1-201ENST00000445357 VPS13BQ7Z7G8 4022 aa8.1□□□□□ -1.11
NCLP1-201ENST00000445357 LINC00313P59037 77 aa8.1□□□□□ -1.11
NCLP1-201ENST00000445357 Q5W150 140 aa8.1□□□□□ -1.11
NCLP1-201ENST00000445357 PLA2G1BP04054 148 aaKnown RBP8.08□□□□□ -1.12
NCLP1-201ENST00000445357 Q8N9P0 234 aaPredicted RBP8.08□□□□□ -1.12
NCLP1-201ENST00000445357 TYMSOSQ8TAI1 123 aa8.06□□□□□ -1.12
NCLP1-201ENST00000445357 A0A1B0GVY2 172 aa8.05□□□□□ -1.12
NCLP1-201ENST00000445357 COA5Q86WW8 74 aa8.05□□□□□ -1.12
NCLP1-201ENST00000445357 SPINK1P00995 79 aa8.04□□□□□ -1.12
NCLP1-201ENST00000445357 V9GYY9 64 aa8.04□□□□□ -1.12
NCLP1-201ENST00000445357 KRTAP16-1A8MUX0 517 aa8.04□□□□□ -1.12
NCLP1-201ENST00000445357 DYNC1H1Q14204 4646 aaKnown RBP8.03□□□□□ -1.12
NCLP1-201ENST00000445357 FAM229AH3BQW9 127 aa8.03□□□□□ -1.12
NCLP1-201ENST00000445357 PKHD1P08F94 4074 aa8.02□□□□□ -1.12
NCLP1-201ENST00000445357 LCE2CQ5TA81 110 aa8.02□□□□□ -1.13
NCLP1-201ENST00000445357 RPS29P62273 56 aaKnown RBP8.01□□□□□ -1.13
NCLP1-201ENST00000445357 PRO0628Q9UI54 55 aa8.01□□□□□ -1.13
NCLP1-201ENST00000445357 LCE2AQ5TA79 106 aaPredicted RBP7.99□□□□□ -1.13
NCLP1-201ENST00000445357 PRR26Q8N8Z3 221 aa7.97□□□□□ -1.13
NCLP1-201ENST00000445357 SPAG11AQ6PDA7 123 aa7.97□□□□□ -1.13
NCLP1-201ENST00000445357 LINC00304Q8N9R0 145 aa7.97□□□□□ -1.13
NCLP1-201ENST00000445357 HRES1P13985 223 aa7.96□□□□□ -1.14
NCLP1-201ENST00000445357 APOBP04114 4563 aaKnown RBP7.95□□□□□ -1.14
NCLP1-201ENST00000445357 KIAA1109Q2LD37 5005 aa7.95□□□□□ -1.14
NCLP1-201ENST00000445357 PSPHP1O15172 72 aa7.95□□□□□ -1.14
NCLP1-201ENST00000445357 IGKV2-30P06310 120 aa7.95□□□□□ -1.14
NCLP1-201ENST00000445357 KRTAP10-4P60372 401 aaPredicted RBP7.95□□□□□ -1.14
NCLP1-201ENST00000445357 BRK1Q8WUW1 75 aa7.95□□□□□ -1.14
NCLP1-201ENST00000445357 SMR3BP02814 79 aaPredicted RBP7.94□□□□□ -1.14
NCLP1-201ENST00000445357 A8MUN3 132 aa7.93□□□□□ -1.14
NCLP1-201ENST00000445357 Q5VV11 94 aa7.9□□□□□ -1.14
NCLP1-201ENST00000445357 RETNLBQ9BQ08 111 aa7.9□□□□□ -1.14
NCLP1-201ENST00000445357 HERC2O95714 4834 aa7.9□□□□□ -1.15
NCLP1-201ENST00000445357 PKHD1L1Q86WI1 4243 aa7.89□□□□□ -1.15
NCLP1-201ENST00000445357 DMAC1Q96GE9 116 aa7.89□□□□□ -1.15
NCLP1-201ENST00000445357 FAT1Q14517 4588 aa7.88□□□□□ -1.15
NCLP1-201ENST00000445357 PRR15LQ9BU68 103 aa7.87□□□□□ -1.15
NCLP1-201ENST00000445357 ACYP2P14621 99 aa7.86□□□□□ -1.15
NCLP1-201ENST00000445357 LINC01558Q9Y6Z2 57 aa7.86□□□□□ -1.15
NCLP1-201ENST00000445357 Q75L30 129 aa7.83□□□□□ -1.16
NCLP1-201ENST00000445357 RYR1P21817 5038 aa7.82□□□□□ -1.16
NCLP1-201ENST00000445357 IGKV2D-30A0A075B6S6 120 aa7.8□□□□□ -1.16
NCLP1-201ENST00000445357 CHKB-CPT1BH3BT56 60 aa7.79□□□□□ -1.16
NCLP1-201ENST00000445357 LORP23490 312 aaPredicted RBP7.79□□□□□ -1.16
NCLP1-201ENST00000445357 HSPG2P98160 4391 aa7.78□□□□□ -1.16
NCLP1-201ENST00000445357 PCLOQ9Y6V0 5065 aa7.76□□□□□ -1.17
NCLP1-201ENST00000445357 A8MUU9 505 aa7.75□□□□□ -1.17
NCLP1-201ENST00000445357 C20orf166-AS1Q96NR2 134 aa7.75□□□□□ -1.17
NCLP1-201ENST00000445357 KRTAP17-1Q9BYP8 105 aa7.75□□□□□ -1.17
NCLP1-201ENST00000445357 C7orf65Q6ZTY9 151 aa7.74□□□□□ -1.17
NCLP1-201ENST00000445357 KRTAP4-5Q9BYR2 181 aa7.71□□□□□ -1.17
NCLP1-201ENST00000445357 ABCA13Q86UQ4 5058 aa7.71□□□□□ -1.17
NCLP1-201ENST00000445357 C9orf92A6NGG3 77 aa7.7□□□□□ -1.18
NCLP1-201ENST00000445357 A6NED7 52 aa7.7□□□□□ -1.18
NCLP1-201ENST00000445357 FLG2Q5D862 2391 aaPredicted RBP7.68□□□□□ -1.18
NCLP1-201ENST00000445357 A8MU10 97 aa7.67□□□□□ -1.18
NCLP1-201ENST00000445357 LCA10Q71F78 164 aa7.66□□□□□ -1.18
NCLP1-201ENST00000445357 CDC42SE1Q9NRR8 79 aa7.64□□□□□ -1.19
NCLP1-201ENST00000445357 KRTAP10-8P60410 259 aa7.64□□□□□ -1.19
NCLP1-201ENST00000445357 SPINK7P58062 85 aa7.62□□□□□ -1.19
NCLP1-201ENST00000445357 Q5VSD8 79 aa7.62□□□□□ -1.19
NCLP1-201ENST00000445357 Q8N1X5 172 aa7.62□□□□□ -1.19
NCLP1-201ENST00000445357 FAT3Q8TDW7 4589 aa7.6□□□□□ -1.19
NCLP1-201ENST00000445357 TNXBP22105 4242 aa7.6□□□□□ -1.19
NCLP1-201ENST00000445357 ATP11AUNQ6ZP68 121 aa7.59□□□□□ -1.2
NCLP1-201ENST00000445357 A0A1B0GU69 56 aa7.58□□□□□ -1.2
NCLP1-201ENST00000445357 LRP1Q07954 4544 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms