RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 SMR3BP02814 79 aaPredicted RBP10.93□□□□□ -0.66
SEMA3D-202ENST00000444867 TYMSOSQ8TAI1 123 aa10.92□□□□□ -0.66
SEMA3D-202ENST00000444867 APOBP04114 4563 aaKnown RBP10.91□□□□□ -0.66
SEMA3D-202ENST00000444867 FAM236DA0A1B0GTK5 79 aa10.9□□□□□ -0.66
SEMA3D-202ENST00000444867 FAM236CP0DP71 79 aa10.9□□□□□ -0.66
SEMA3D-202ENST00000444867 MP68P56378 58 aa10.9□□□□□ -0.66
SEMA3D-202ENST00000444867 C4orf48Q5BLP8 95 aa10.9□□□□□ -0.66
SEMA3D-202ENST00000444867 ZCCHC13Q8WW36 166 aaKnown RBP10.89□□□□□ -0.67
SEMA3D-202ENST00000444867 TP53AIP1Q9HCN2 124 aa10.89□□□□□ -0.67
SEMA3D-202ENST00000444867 H3BPC8 53 aa10.88□□□□□ -0.67
SEMA3D-202ENST00000444867 KRTAP10-4P60372 401 aaPredicted RBP10.88□□□□□ -0.67
SEMA3D-202ENST00000444867 C8orf87E5RJ46 101 aa10.87□□□□□ -0.67
SEMA3D-202ENST00000444867 BIRC6Q9NR09 4857 aa10.87□□□□□ -0.67
SEMA3D-202ENST00000444867 SPINK1P00995 79 aa10.87□□□□□ -0.67
SEMA3D-202ENST00000444867 ATP5EP56381 51 aaPredicted RBP10.87□□□□□ -0.67
SEMA3D-202ENST00000444867 RPS28P62857 69 aaKnown RBP10.86□□□□□ -0.67
SEMA3D-202ENST00000444867 C1orf195Q5TG92 126 aa10.86□□□□□ -0.67
SEMA3D-202ENST00000444867 MRPL34Q9BQ48 92 aaKnown RBP10.86□□□□□ -0.67
SEMA3D-202ENST00000444867 H0Y9P7 68 aa10.84□□□□□ -0.67
SEMA3D-202ENST00000444867 RPS29P62273 56 aaKnown RBP10.83□□□□□ -0.68
SEMA3D-202ENST00000444867 SPAG11AQ6PDA7 123 aa10.83□□□□□ -0.68
SEMA3D-202ENST00000444867 PRR26Q8N8Z3 221 aa10.82□□□□□ -0.68
SEMA3D-202ENST00000444867 NOTCH2NLQ7Z3S9 236 aa10.81□□□□□ -0.68
SEMA3D-202ENST00000444867 TRAV22A0A0B4J277 110 aa10.8□□□□□ -0.68
SEMA3D-202ENST00000444867 LINC00304Q8N9R0 145 aa10.8□□□□□ -0.68
SEMA3D-202ENST00000444867 LINC00208Q96KT6 92 aa10.79□□□□□ -0.68
SEMA3D-202ENST00000444867 NDUFS5O43920 106 aa10.77□□□□□ -0.68
SEMA3D-202ENST00000444867 LINC00313P59037 77 aa10.76□□□□□ -0.69
SEMA3D-202ENST00000444867 FAM229AH3BQW9 127 aa10.75□□□□□ -0.69
SEMA3D-202ENST00000444867 SERP1Q9Y6X1 66 aa10.74□□□□□ -0.69
SEMA3D-202ENST00000444867 KIAA1109Q2LD37 5005 aa10.73□□□□□ -0.69
SEMA3D-202ENST00000444867 C1orf64Q8NEQ6 169 aa10.73□□□□□ -0.69
SEMA3D-202ENST00000444867 KRTAP3-3Q9BYR6 98 aa10.72□□□□□ -0.69
SEMA3D-202ENST00000444867 KRTAP3-2Q9BYR7 98 aa10.72□□□□□ -0.69
SEMA3D-202ENST00000444867 FAT1Q14517 4588 aa10.71□□□□□ -0.69
SEMA3D-202ENST00000444867 PKHD1L1Q86WI1 4243 aa10.7□□□□□ -0.7
SEMA3D-202ENST00000444867 RYR1P21817 5038 aa10.69□□□□□ -0.7
SEMA3D-202ENST00000444867 HSPG2P98160 4391 aa10.66□□□□□ -0.7
SEMA3D-202ENST00000444867 Q8N9P0 234 aaPredicted RBP10.66□□□□□ -0.7
SEMA3D-202ENST00000444867 SPANXA2-OT1Q8N9U9 137 aa10.64□□□□□ -0.71
SEMA3D-202ENST00000444867 OXTP01178 125 aa10.63□□□□□ -0.71
SEMA3D-202ENST00000444867 KRTAP16-1A8MUX0 517 aa10.62□□□□□ -0.71
SEMA3D-202ENST00000444867 Q5VSD8 79 aa10.62□□□□□ -0.71
SEMA3D-202ENST00000444867 CYP4F30PQ9H0H9 118 aa10.62□□□□□ -0.71
SEMA3D-202ENST00000444867 KRTAP13-3Q3SY46 172 aa10.61□□□□□ -0.71
SEMA3D-202ENST00000444867 HERC2O95714 4834 aa10.6□□□□□ -0.71
SEMA3D-202ENST00000444867 LOC101927531A0A1B0GV80 90 aa10.58□□□□□ -0.72
SEMA3D-202ENST00000444867 Q5W150 140 aa10.57□□□□□ -0.72
SEMA3D-202ENST00000444867 KRTAP17-1Q9BYP8 105 aa10.55□□□□□ -0.72
SEMA3D-202ENST00000444867 Q8N1X5 172 aa10.53□□□□□ -0.72
SEMA3D-202ENST00000444867 IGLV7-46A0A075B6I9 117 aa10.51□□□□□ -0.73
SEMA3D-202ENST00000444867 SMIM26A0A096LP01 95 aa10.51□□□□□ -0.73
SEMA3D-202ENST00000444867 KRTAP10-8P60410 259 aa10.5□□□□□ -0.73
SEMA3D-202ENST00000444867 PCOTHQ58A44 107 aa10.49□□□□□ -0.73
SEMA3D-202ENST00000444867 PRR4Q16378 134 aa10.48□□□□□ -0.73
SEMA3D-202ENST00000444867 KRTAP4-5Q9BYR2 181 aa10.47□□□□□ -0.73
SEMA3D-202ENST00000444867 IGKV2-30P06310 120 aa10.42□□□□□ -0.74
SEMA3D-202ENST00000444867 RETNLBQ9BQ08 111 aa10.4□□□□□ -0.75
SEMA3D-202ENST00000444867 ABCA13Q86UQ4 5058 aa10.4□□□□□ -0.75
SEMA3D-202ENST00000444867 FLG2Q5D862 2391 aaPredicted RBP10.37□□□□□ -0.75
SEMA3D-202ENST00000444867 TNXBP22105 4242 aa10.37□□□□□ -0.75
SEMA3D-202ENST00000444867 FP248Q71RG6 208 aaPredicted RBP10.36□□□□□ -0.75
SEMA3D-202ENST00000444867 C20orf166-AS1Q96NR2 134 aa10.36□□□□□ -0.75
SEMA3D-202ENST00000444867 A8MUU9 505 aa10.35□□□□□ -0.75
SEMA3D-202ENST00000444867 C9orf92A6NGG3 77 aa10.33□□□□□ -0.76
SEMA3D-202ENST00000444867 FAT3Q8TDW7 4589 aa10.31□□□□□ -0.76
SEMA3D-202ENST00000444867 PCLOQ9Y6V0 5065 aa10.3□□□□□ -0.76
SEMA3D-202ENST00000444867 HRES1P13985 223 aa10.29□□□□□ -0.76
SEMA3D-202ENST00000444867 COA5Q86WW8 74 aa10.29□□□□□ -0.76
SEMA3D-202ENST00000444867 LRP1Q07954 4544 aaKnown RBP10.29□□□□□ -0.76
SEMA3D-202ENST00000444867 IGKV2D-30A0A075B6S6 120 aa10.27□□□□□ -0.77
SEMA3D-202ENST00000444867 C4orf26Q17RF5 130 aa10.25□□□□□ -0.77
SEMA3D-202ENST00000444867 MYCBP2O75592 4640 aa10.25□□□□□ -0.77
SEMA3D-202ENST00000444867 MT1HL1P0DM35 61 aa10.25□□□□□ -0.77
SEMA3D-202ENST00000444867 C7orf65Q6ZTY9 151 aa10.25□□□□□ -0.77
SEMA3D-202ENST00000444867 Q75L30 129 aa10.23□□□□□ -0.77
SEMA3D-202ENST00000444867 Q1T7F1 81 aa10.22□□□□□ -0.77
SEMA3D-202ENST00000444867 MPLKIPQ8TAP9 179 aa10.22□□□□□ -0.77
SEMA3D-202ENST00000444867 DMAC1Q96GE9 116 aa10.22□□□□□ -0.77
SEMA3D-202ENST00000444867 ACYP2P14621 99 aa10.22□□□□□ -0.77
SEMA3D-202ENST00000444867 V9GYY9 64 aa10.19□□□□□ -0.78
SEMA3D-202ENST00000444867 DMBT1Q9UGM3 2413 aaPredicted RBP10.09□□□□□ -0.79
SEMA3D-202ENST00000444867 A8MUN3 132 aa10.06□□□□□ -0.8
SEMA3D-202ENST00000444867 J3QL48 77 aa10.06□□□□□ -0.8
SEMA3D-202ENST00000444867 RPL37P61927 97 aaKnown RBP10.06□□□□□ -0.8
SEMA3D-202ENST00000444867 CHKB-CPT1BH3BT56 60 aa10.05□□□□□ -0.8
SEMA3D-202ENST00000444867 ATP11AUNQ6ZP68 121 aa10.05□□□□□ -0.8
SEMA3D-202ENST00000444867 SPINK7P58062 85 aa10.04□□□□□ -0.8
SEMA3D-202ENST00000444867 XP32Q5T750 250 aa10.04□□□□□ -0.8
SEMA3D-202ENST00000444867 LINC01558Q9Y6Z2 57 aa10□□□□□ -0.81
SEMA3D-202ENST00000444867 PSPHP1O15172 72 aa9.97□□□□□ -0.81
SEMA3D-202ENST00000444867 TPRXLQ17RH7 258 aa9.94□□□□□ -0.82
SEMA3D-202ENST00000444867 PRR15LQ9BU68 103 aa9.94□□□□□ -0.82
SEMA3D-202ENST00000444867 Q5VV11 94 aa9.91□□□□□ -0.82
SEMA3D-202ENST00000444867 HERC1Q15751 4861 aa9.91□□□□□ -0.82
SEMA3D-202ENST00000444867 COX6B2Q6YFQ2 88 aa9.86□□□□□ -0.83
SEMA3D-202ENST00000444867 KRTAP3-1Q9BYR8 98 aa9.85□□□□□ -0.83
SEMA3D-202ENST00000444867 SPTSSBQ8NFR3 76 aa9.82□□□□□ -0.84
SEMA3D-202ENST00000444867 BRK1Q8WUW1 75 aa9.81□□□□□ -0.84
SEMA3D-202ENST00000444867 PRO0628Q9UI54 55 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms