RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 LOC110117498A0A087WWA1 95 aa9.73□□□□□ -0.85
CCDC188-202ENST00000444532 SMCPP49901 116 aaPredicted RBP9.73□□□□□ -0.85
CCDC188-202ENST00000444532 Q6ZQT0 140 aa9.73□□□□□ -0.85
CCDC188-202ENST00000444532 C14orf132Q9NPU4 83 aa9.73□□□□□ -0.85
CCDC188-202ENST00000444532 MT1HP80294 61 aa9.72□□□□□ -0.85
CCDC188-202ENST00000444532 A0A1B0GW54 56 aa9.71□□□□□ -0.86
CCDC188-202ENST00000444532 PDE6GP18545 87 aa9.71□□□□□ -0.86
CCDC188-202ENST00000444532 KRTAP9-2Q9BYQ4 174 aa9.71□□□□□ -0.86
CCDC188-202ENST00000444532 PRO0461Q9UI25 63 aa9.7□□□□□ -0.86
CCDC188-202ENST00000444532 IGHV6-1A0A0B4J1U7 121 aa9.69□□□□□ -0.86
CCDC188-202ENST00000444532 KRTAP16-1A8MUX0 517 aa9.69□□□□□ -0.86
CCDC188-202ENST00000444532 COX6B2Q6YFQ2 88 aa9.69□□□□□ -0.86
CCDC188-202ENST00000444532 J3KT08 172 aa9.68□□□□□ -0.86
CCDC188-202ENST00000444532 NOTCH2NLQ7Z3S9 236 aa9.68□□□□□ -0.86
CCDC188-202ENST00000444532 A0A1B0GVX0 72 aa9.66□□□□□ -0.86
CCDC188-202ENST00000444532 GTF2H5Q6ZYL4 71 aa9.66□□□□□ -0.86
CCDC188-202ENST00000444532 C8orf87E5RJ46 101 aa9.65□□□□□ -0.86
CCDC188-202ENST00000444532 NDUFB1O75438 58 aa9.6□□□□□ -0.87
CCDC188-202ENST00000444532 F8W1H4 67 aa9.58□□□□□ -0.88
CCDC188-202ENST00000444532 M0R2T5 61 aa9.57□□□□□ -0.88
CCDC188-202ENST00000444532 A8MWP4 228 aa9.54□□□□□ -0.88
CCDC188-202ENST00000444532 NREPQ16612 68 aa9.54□□□□□ -0.88
CCDC188-202ENST00000444532 LCE2DQ5TA82 110 aaPredicted RBP9.53□□□□□ -0.88
CCDC188-202ENST00000444532 KRTAP10-6P60371 365 aaPredicted RBP9.52□□□□□ -0.89
CCDC188-202ENST00000444532 LORP23490 312 aaPredicted RBP9.51□□□□□ -0.89
CCDC188-202ENST00000444532 ETDBQ3ZM63 59 aa9.5□□□□□ -0.89
CCDC188-202ENST00000444532 C8orf17Q9NRJ1 99 aa9.5□□□□□ -0.89
CCDC188-202ENST00000444532 IGKV3D-7A0A0C4DH55 119 aa9.49□□□□□ -0.89
CCDC188-202ENST00000444532 FLGP20930 4061 aaPredicted RBP9.48□□□□□ -0.89
CCDC188-202ENST00000444532 Q8N9P0 234 aaPredicted RBP9.48□□□□□ -0.89
CCDC188-202ENST00000444532 A0A1B0GV90 55 aa9.47□□□□□ -0.89
CCDC188-202ENST00000444532 PRR15Q8IV56 129 aa9.46□□□□□ -0.9
CCDC188-202ENST00000444532 ZCCHC13Q8WW36 166 aaKnown RBP9.46□□□□□ -0.9
CCDC188-202ENST00000444532 HRES1P13985 223 aa9.42□□□□□ -0.9
CCDC188-202ENST00000444532 Q6ZVQ6 151 aa9.42□□□□□ -0.9
CCDC188-202ENST00000444532 RBM12B-AS1Q9P1G2 102 aa9.42□□□□□ -0.9
CCDC188-202ENST00000444532 MPLKIPQ8TAP9 179 aa9.41□□□□□ -0.9
CCDC188-202ENST00000444532 LINC00846Q9NV44 126 aa9.41□□□□□ -0.9
CCDC188-202ENST00000444532 FAM236DA0A1B0GTK5 79 aa9.39□□□□□ -0.91
CCDC188-202ENST00000444532 FAM236CP0DP71 79 aa9.39□□□□□ -0.91
CCDC188-202ENST00000444532 MMP24-AS1A0A0U1RRL7 71 aa9.37□□□□□ -0.91
CCDC188-202ENST00000444532 BPY2O14599 106 aa9.37□□□□□ -0.91
CCDC188-202ENST00000444532 TMEM254Q8TBM7 123 aa9.36□□□□□ -0.91
CCDC188-202ENST00000444532 KRTAP9-6A0A140TA67 174 aa9.35□□□□□ -0.91
CCDC188-202ENST00000444532 K7EQZ3 153 aa9.35□□□□□ -0.91
CCDC188-202ENST00000444532 SPINK7P58062 85 aa9.35□□□□□ -0.91
CCDC188-202ENST00000444532 MRPL34Q9BQ48 92 aaKnown RBP9.35□□□□□ -0.91
CCDC188-202ENST00000444532 UBL5Q9BZL1 73 aa9.34□□□□□ -0.91
CCDC188-202ENST00000444532 hDV103S1A0JD37 113 aa9.32□□□□□ -0.92
CCDC188-202ENST00000444532 Q8N9L7 120 aa9.28□□□□□ -0.92
CCDC188-202ENST00000444532 NDUFS5O43920 106 aa9.25□□□□□ -0.93
CCDC188-202ENST00000444532 ACYP1P07311 99 aa9.23□□□□□ -0.93
CCDC188-202ENST00000444532 KRTAP9-8Q9BYQ0 159 aa9.23□□□□□ -0.93
CCDC188-202ENST00000444532 CRCT1Q9UGL9 99 aa9.21□□□□□ -0.94
CCDC188-202ENST00000444532 FAM240AA0A1B0GVK7 77 aa9.2□□□□□ -0.94
CCDC188-202ENST00000444532 CASC2Q6XLA1 102 aa9.2□□□□□ -0.94
CCDC188-202ENST00000444532 WFDC13Q8IUB5 93 aa9.2□□□□□ -0.94
CCDC188-202ENST00000444532 CXCL6P80162 114 aa9.17□□□□□ -0.94
CCDC188-202ENST00000444532 HCG22E2RYF7 251 aa9.13□□□□□ -0.95
CCDC188-202ENST00000444532 Q5W150 140 aa9.13□□□□□ -0.95
CCDC188-202ENST00000444532 FSIP2Q5CZC0 6907 aa9.11□□□□□ -0.95
CCDC188-202ENST00000444532 MT2AP02795 61 aa9.09□□□□□ -0.95
CCDC188-202ENST00000444532 C7orf65Q6ZTY9 151 aa9.09□□□□□ -0.95
CCDC188-202ENST00000444532 IGKV2D-30A0A075B6S6 120 aa9.08□□□□□ -0.96
CCDC188-202ENST00000444532 IGKV2-30P06310 120 aa9.08□□□□□ -0.96
CCDC188-202ENST00000444532 LINC00643Q86TS7 51 aa9.05□□□□□ -0.96
CCDC188-202ENST00000444532 ATP5EP2Q5VTU8 51 aa9.04□□□□□ -0.96
CCDC188-202ENST00000444532 J3QR89 54 aa9.03□□□□□ -0.96
CCDC188-202ENST00000444532 H1FX-AS1Q4G0G2 97 aa9.03□□□□□ -0.96
CCDC188-202ENST00000444532 MT1FP04733 61 aa9.01□□□□□ -0.97
CCDC188-202ENST00000444532 KRTAP10-10P60014 251 aa9.01□□□□□ -0.97
CCDC188-202ENST00000444532 HIST1H4AP62805 103 aaKnown RBP8.98□□□□□ -0.97
CCDC188-202ENST00000444532 TP53AIP1Q9HCN2 124 aa8.97□□□□□ -0.97
CCDC188-202ENST00000444532 KRTAP9-3Q9BYQ3 159 aa8.93□□□□□ -0.98
CCDC188-202ENST00000444532 A0A087WVE0 104 aa8.92□□□□□ -0.98
CCDC188-202ENST00000444532 C4orf26Q17RF5 130 aa8.92□□□□□ -0.98
CCDC188-202ENST00000444532 K7ERU9 68 aa8.87□□□□□ -0.99
CCDC188-202ENST00000444532 LCE2BO14633 110 aa8.85□□□□□ -0.99
CCDC188-202ENST00000444532 USH2AO75445 5202 aa8.82□□□□□ -1
CCDC188-202ENST00000444532 C1orf64Q8NEQ6 169 aa8.79□□□□□ -1
CCDC188-202ENST00000444532 KRTAP3-1Q9BYR8 98 aa8.79□□□□□ -1
CCDC188-202ENST00000444532 TRAV22A0A0B4J277 110 aa8.76□□□□□ -1.01
CCDC188-202ENST00000444532 UQCRQO14949 82 aa8.76□□□□□ -1.01
CCDC188-202ENST00000444532 MT-ATP8P03928 68 aa8.75□□□□□ -1.01
CCDC188-202ENST00000444532 CYP4F30PQ9H0H9 118 aa8.75□□□□□ -1.01
CCDC188-202ENST00000444532 S4R3F8 94 aa8.72□□□□□ -1.01
CCDC188-202ENST00000444532 LOC101927531A0A1B0GV80 90 aa8.71□□□□□ -1.02
CCDC188-202ENST00000444532 IMUPQ9GZP8 106 aa8.71□□□□□ -1.02
CCDC188-202ENST00000444532 C5orf47Q569G3 176 aa8.7□□□□□ -1.02
CCDC188-202ENST00000444532 OCR1Q9BZK8 76 aa8.7□□□□□ -1.02
CCDC188-202ENST00000444532 H0Y9P7 68 aa8.69□□□□□ -1.02
CCDC188-202ENST00000444532 SSPOA2VEC9 5147 aa8.67□□□□□ -1.02
CCDC188-202ENST00000444532 CSAG1Q6PB30 78 aa8.67□□□□□ -1.02
CCDC188-202ENST00000444532 KRTAP19-1Q8IUB9 90 aa8.66□□□□□ -1.02
CCDC188-202ENST00000444532 ATOX1O00244 68 aa8.65□□□□□ -1.02
CCDC188-202ENST00000444532 SCGB1A1P11684 91 aa8.65□□□□□ -1.02
CCDC188-202ENST00000444532 LCA10Q71F78 164 aa8.65□□□□□ -1.02
CCDC188-202ENST00000444532 LINC00208Q96KT6 92 aa8.6□□□□□ -1.03
CCDC188-202ENST00000444532 FAM236AA0A1B0GUQ0 79 aa8.57□□□□□ -1.04
CCDC188-202ENST00000444532 FAM236BA0A1B0GV22 79 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms