RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 J3KT08 172 aa5.63□□□□□ -1.51
SF3A1-203ENST00000444440 TAX1BP3O14907 124 aa5.63□□□□□ -1.51
SF3A1-203ENST00000444440 DSCR10P59022 87 aa5.63□□□□□ -1.51
SF3A1-203ENST00000444440 DEFB116Q30KQ4 102 aa5.63□□□□□ -1.51
SF3A1-203ENST00000444440 Q6ZQT0 140 aa5.63□□□□□ -1.51
SF3A1-203ENST00000444440 C20orf166-AS1Q96NR2 134 aa5.63□□□□□ -1.51
SF3A1-203ENST00000444440 A8MUU9 505 aa5.62□□□□□ -1.51
SF3A1-203ENST00000444440 COX6B2Q6YFQ2 88 aa5.62□□□□□ -1.51
SF3A1-203ENST00000444440 IGHV6-1A0A0B4J1U7 121 aa5.6□□□□□ -1.51
SF3A1-203ENST00000444440 H3BT86 120 aa5.6□□□□□ -1.51
SF3A1-203ENST00000444440 NDUFB1O75438 58 aa5.6□□□□□ -1.51
SF3A1-203ENST00000444440 NOTCH2NLQ7Z3S9 236 aa5.6□□□□□ -1.51
SF3A1-203ENST00000444440 C14orf132Q9NPU4 83 aa5.6□□□□□ -1.51
SF3A1-203ENST00000444440 A0A1B0GVX0 72 aa5.59□□□□□ -1.51
SF3A1-203ENST00000444440 KRTAP16-1A8MUX0 517 aa5.59□□□□□ -1.51
SF3A1-203ENST00000444440 C8orf87E5RJ46 101 aa5.59□□□□□ -1.51
SF3A1-203ENST00000444440 M0R2T5 61 aa5.59□□□□□ -1.51
SF3A1-203ENST00000444440 COL5A1-AS1Q5SY13 56 aa5.59□□□□□ -1.51
SF3A1-203ENST00000444440 CRCT1Q9UGL9 99 aa5.59□□□□□ -1.51
SF3A1-203ENST00000444440 NREPQ16612 68 aa5.56□□□□□ -1.52
SF3A1-203ENST00000444440 SPCS1Q9Y6A9 102 aa5.56□□□□□ -1.52
SF3A1-203ENST00000444440 MTURNQ8N3F0 131 aa5.53□□□□□ -1.52
SF3A1-203ENST00000444440 A8MWP4 228 aa5.52□□□□□ -1.53
SF3A1-203ENST00000444440 PCP4L1A6NKN8 68 aa5.49□□□□□ -1.53
SF3A1-203ENST00000444440 KRTAP9-8Q9BYQ0 159 aa5.49□□□□□ -1.53
SF3A1-203ENST00000444440 C8orf17Q9NRJ1 99 aa5.49□□□□□ -1.53
SF3A1-203ENST00000444440 IGKV3D-7A0A0C4DH55 119 aa5.48□□□□□ -1.53
SF3A1-203ENST00000444440 GTF2H5Q6ZYL4 71 aa5.48□□□□□ -1.53
SF3A1-203ENST00000444440 PRR15Q8IV56 129 aa5.48□□□□□ -1.53
SF3A1-203ENST00000444440 K7EP34 96 aa5.47□□□□□ -1.53
SF3A1-203ENST00000444440 HRES1P13985 223 aa5.47□□□□□ -1.53
SF3A1-203ENST00000444440 BPY2O14599 106 aa5.46□□□□□ -1.54
SF3A1-203ENST00000444440 SMCPP49901 116 aaPredicted RBP5.46□□□□□ -1.54
SF3A1-203ENST00000444440 Q8N9P0 234 aaPredicted RBP5.46□□□□□ -1.54
SF3A1-203ENST00000444440 MPLKIPQ8TAP9 179 aa5.46□□□□□ -1.54
SF3A1-203ENST00000444440 ZCCHC13Q8WW36 166 aaKnown RBP5.46□□□□□ -1.54
SF3A1-203ENST00000444440 Q6ZVQ6 151 aa5.45□□□□□ -1.54
SF3A1-203ENST00000444440 USH2AO75445 5202 aa5.45□□□□□ -1.54
SF3A1-203ENST00000444440 RBM12B-AS1Q9P1G2 102 aa5.44□□□□□ -1.54
SF3A1-203ENST00000444440 PRO0461Q9UI25 63 aa5.44□□□□□ -1.54
SF3A1-203ENST00000444440 SSPOA2VEC9 5147 aa5.43□□□□□ -1.54
SF3A1-203ENST00000444440 FAM236DA0A1B0GTK5 79 aa5.42□□□□□ -1.54
SF3A1-203ENST00000444440 F8W1H4 67 aa5.42□□□□□ -1.54
SF3A1-203ENST00000444440 FAM236CP0DP71 79 aa5.42□□□□□ -1.54
SF3A1-203ENST00000444440 TMEM254Q8TBM7 123 aa5.42□□□□□ -1.54
SF3A1-203ENST00000444440 hDV103S1A0JD37 113 aa5.41□□□□□ -1.54
SF3A1-203ENST00000444440 MRPL34Q9BQ48 92 aaKnown RBP5.41□□□□□ -1.54
SF3A1-203ENST00000444440 UBL5Q9BZL1 73 aa5.41□□□□□ -1.54
SF3A1-203ENST00000444440 K7EQZ3 153 aa5.4□□□□□ -1.54
SF3A1-203ENST00000444440 MT2AP02795 61 aa5.4□□□□□ -1.54
SF3A1-203ENST00000444440 MMP24-AS1A0A0U1RRL7 71 aa5.39□□□□□ -1.55
SF3A1-203ENST00000444440 SPINK7P58062 85 aa5.39□□□□□ -1.55
SF3A1-203ENST00000444440 NDUFS5O43920 106 aa5.38□□□□□ -1.55
SF3A1-203ENST00000444440 MT1FP04733 61 aa5.37□□□□□ -1.55
SF3A1-203ENST00000444440 LINC00846Q9NV44 126 aa5.37□□□□□ -1.55
SF3A1-203ENST00000444440 ETDBQ3ZM63 59 aa5.35□□□□□ -1.55
SF3A1-203ENST00000444440 CASC2Q6XLA1 102 aa5.35□□□□□ -1.55
SF3A1-203ENST00000444440 WFDC13Q8IUB5 93 aa5.33□□□□□ -1.56
SF3A1-203ENST00000444440 Q8N9L7 120 aa5.33□□□□□ -1.56
SF3A1-203ENST00000444440 LCE2BO14633 110 aa5.32□□□□□ -1.56
SF3A1-203ENST00000444440 SVIPQ8NHG7 77 aa5.31□□□□□ -1.56
SF3A1-203ENST00000444440 KRTAP9-3Q9BYQ3 159 aa5.31□□□□□ -1.56
SF3A1-203ENST00000444440 HCG22E2RYF7 251 aa5.3□□□□□ -1.56
SF3A1-203ENST00000444440 CXCL6P80162 114 aa5.29□□□□□ -1.56
SF3A1-203ENST00000444440 ACYP1P07311 99 aa5.28□□□□□ -1.56
SF3A1-203ENST00000444440 FCGBPQ9Y6R7 5405 aaPredicted RBP5.27□□□□□ -1.57
SF3A1-203ENST00000444440 KRTAP10-10P60014 251 aa5.27□□□□□ -1.57
SF3A1-203ENST00000444440 Q5W150 140 aa5.26□□□□□ -1.57
SF3A1-203ENST00000444440 C7orf65Q6ZTY9 151 aa5.26□□□□□ -1.57
SF3A1-203ENST00000444440 IGKV2D-30A0A075B6S6 120 aa5.25□□□□□ -1.57
SF3A1-203ENST00000444440 IGKV2-30P06310 120 aa5.25□□□□□ -1.57
SF3A1-203ENST00000444440 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.23□□□□□ -1.57
SF3A1-203ENST00000444440 TP53AIP1Q9HCN2 124 aa5.23□□□□□ -1.57
SF3A1-203ENST00000444440 FAM240AA0A1B0GVK7 77 aa5.22□□□□□ -1.57
SF3A1-203ENST00000444440 KRTAP19-1Q8IUB9 90 aa5.21□□□□□ -1.58
SF3A1-203ENST00000444440 H1FX-AS1Q4G0G2 97 aa5.2□□□□□ -1.58
SF3A1-203ENST00000444440 ATP5EP2Q5VTU8 51 aa5.19□□□□□ -1.58
SF3A1-203ENST00000444440 A0A1B0GV90 55 aa5.17□□□□□ -1.58
SF3A1-203ENST00000444440 KRTAP9-7A8MTY7 169 aa5.16□□□□□ -1.58
SF3A1-203ENST00000444440 HIST1H4AP62805 103 aaKnown RBP5.15□□□□□ -1.59
SF3A1-203ENST00000444440 C4orf26Q17RF5 130 aa5.15□□□□□ -1.59
SF3A1-203ENST00000444440 LINC00643Q86TS7 51 aa5.14□□□□□ -1.59
SF3A1-203ENST00000444440 J3QR89 54 aa5.11□□□□□ -1.59
SF3A1-203ENST00000444440 MACF1Q9UPN3 7388 aaKnown RBP5.1□□□□□ -1.59
SF3A1-203ENST00000444440 TRAV22A0A0B4J277 110 aa5.09□□□□□ -1.59
SF3A1-203ENST00000444440 KRTAP19-6Q3LI70 58 aa5.09□□□□□ -1.59
SF3A1-203ENST00000444440 C1orf64Q8NEQ6 169 aa5.09□□□□□ -1.59
SF3A1-203ENST00000444440 UQCRQO14949 82 aa5.08□□□□□ -1.6
SF3A1-203ENST00000444440 CYP4F30PQ9H0H9 118 aa5.08□□□□□ -1.6
SF3A1-203ENST00000444440 LOC101927531A0A1B0GV80 90 aa5.07□□□□□ -1.6
SF3A1-203ENST00000444440 KRTAP3-1Q9BYR8 98 aa5.07□□□□□ -1.6
SF3A1-203ENST00000444440 ATOX1O00244 68 aa5.06□□□□□ -1.6
SF3A1-203ENST00000444440 S4R3F8 94 aa5.04□□□□□ -1.6
SF3A1-203ENST00000444440 A0A087WVE0 104 aa5.03□□□□□ -1.6
SF3A1-203ENST00000444440 H0Y9P7 68 aa5.03□□□□□ -1.6
SF3A1-203ENST00000444440 SYNE2Q8WXH0 6885 aaKnown RBP5.03□□□□□ -1.6
SF3A1-203ENST00000444440 CSAG1Q6PB30 78 aa5.02□□□□□ -1.61
SF3A1-203ENST00000444440 C5orf47Q569G3 176 aa5.01□□□□□ -1.61
SF3A1-203ENST00000444440 PCP4P48539 62 aa5□□□□□ -1.61
SF3A1-203ENST00000444440 MP68P56378 58 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms