RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 IGHV6-1A0A0B4J1U7 121 aa11.32□□□□□ -0.6
TRAF4-205ENST00000444415 MTURNQ8N3F0 131 aa11.31□□□□□ -0.6
TRAF4-205ENST00000444415 A0A1B0GVX0 72 aa11.29□□□□□ -0.6
TRAF4-205ENST00000444415 C21orf62-AS1Q17RA5 79 aa11.26□□□□□ -0.61
TRAF4-205ENST00000444415 PDE6GP18545 87 aa11.25□□□□□ -0.61
TRAF4-205ENST00000444415 H3BT86 120 aa11.25□□□□□ -0.61
TRAF4-205ENST00000444415 A0A1B0GW54 56 aa11.24□□□□□ -0.61
TRAF4-205ENST00000444415 COL5A1-AS1Q5SY13 56 aa11.23□□□□□ -0.61
TRAF4-205ENST00000444415 J3KT08 172 aa11.22□□□□□ -0.61
TRAF4-205ENST00000444415 C8orf87E5RJ46 101 aa11.21□□□□□ -0.61
TRAF4-205ENST00000444415 COX6B2Q6YFQ2 88 aa11.2□□□□□ -0.62
TRAF4-205ENST00000444415 PCP4L1A6NKN8 68 aa11.19□□□□□ -0.62
TRAF4-205ENST00000444415 SPCS1Q9Y6A9 102 aa11.18□□□□□ -0.62
TRAF4-205ENST00000444415 LORP23490 312 aaPredicted RBP11.16□□□□□ -0.62
TRAF4-205ENST00000444415 SMCPP49901 116 aaPredicted RBP11.16□□□□□ -0.62
TRAF4-205ENST00000444415 IGKV3D-7A0A0C4DH55 119 aa11.15□□□□□ -0.62
TRAF4-205ENST00000444415 A8MWP4 228 aa11.15□□□□□ -0.62
TRAF4-205ENST00000444415 KRTAP10-6P60371 365 aaPredicted RBP11.14□□□□□ -0.63
TRAF4-205ENST00000444415 C8orf17Q9NRJ1 99 aa11.11□□□□□ -0.63
TRAF4-205ENST00000444415 NDUFB1O75438 58 aa11.09□□□□□ -0.63
TRAF4-205ENST00000444415 NREPQ16612 68 aa11.09□□□□□ -0.63
TRAF4-205ENST00000444415 Q8N9P0 234 aaPredicted RBP11.09□□□□□ -0.63
TRAF4-205ENST00000444415 PRO0461Q9UI25 63 aa11.09□□□□□ -0.63
TRAF4-205ENST00000444415 HRES1P13985 223 aa11.06□□□□□ -0.64
TRAF4-205ENST00000444415 LCE2DQ5TA82 110 aaPredicted RBP11.06□□□□□ -0.64
TRAF4-205ENST00000444415 PRR15Q8IV56 129 aa11.06□□□□□ -0.64
TRAF4-205ENST00000444415 MPLKIPQ8TAP9 179 aa11.06□□□□□ -0.64
TRAF4-205ENST00000444415 M0R2T5 61 aa11.06□□□□□ -0.64
TRAF4-205ENST00000444415 K7EP34 96 aa11.04□□□□□ -0.64
TRAF4-205ENST00000444415 ZCCHC13Q8WW36 166 aaKnown RBP11.04□□□□□ -0.64
TRAF4-205ENST00000444415 MMP24-AS1A0A0U1RRL7 71 aa11.01□□□□□ -0.65
TRAF4-205ENST00000444415 K7EQZ3 153 aa11□□□□□ -0.65
TRAF4-205ENST00000444415 Q6ZVQ6 151 aa11□□□□□ -0.65
TRAF4-205ENST00000444415 GTF2H5Q6ZYL4 71 aa10.96□□□□□ -0.65
TRAF4-205ENST00000444415 FSIP2Q5CZC0 6907 aa10.92□□□□□ -0.66
TRAF4-205ENST00000444415 BPY2O14599 106 aa10.92□□□□□ -0.66
TRAF4-205ENST00000444415 TMEM254Q8TBM7 123 aa10.92□□□□□ -0.66
TRAF4-205ENST00000444415 SPINK7P58062 85 aa10.91□□□□□ -0.66
TRAF4-205ENST00000444415 MRPL34Q9BQ48 92 aaKnown RBP10.91□□□□□ -0.66
TRAF4-205ENST00000444415 Q8N9L7 120 aa10.89□□□□□ -0.67
TRAF4-205ENST00000444415 LINC00846Q9NV44 126 aa10.89□□□□□ -0.67
TRAF4-205ENST00000444415 hDV103S1A0JD37 113 aa10.87□□□□□ -0.67
TRAF4-205ENST00000444415 KRTAP9-6A0A140TA67 174 aa10.87□□□□□ -0.67
TRAF4-205ENST00000444415 RBM12B-AS1Q9P1G2 102 aa10.87□□□□□ -0.67
TRAF4-205ENST00000444415 FAM236DA0A1B0GTK5 79 aa10.86□□□□□ -0.67
TRAF4-205ENST00000444415 FAM236CP0DP71 79 aa10.86□□□□□ -0.67
TRAF4-205ENST00000444415 F8W1H4 67 aa10.85□□□□□ -0.67
TRAF4-205ENST00000444415 KRTAP9-8Q9BYQ0 159 aa10.84□□□□□ -0.67
TRAF4-205ENST00000444415 ETDBQ3ZM63 59 aa10.78□□□□□ -0.68
TRAF4-205ENST00000444415 WFDC13Q8IUB5 93 aa10.78□□□□□ -0.68
TRAF4-205ENST00000444415 UBL5Q9BZL1 73 aa10.76□□□□□ -0.69
TRAF4-205ENST00000444415 NDUFS5O43920 106 aa10.75□□□□□ -0.69
TRAF4-205ENST00000444415 Q5W150 140 aa10.75□□□□□ -0.69
TRAF4-205ENST00000444415 CASC2Q6XLA1 102 aa10.74□□□□□ -0.69
TRAF4-205ENST00000444415 CRCT1Q9UGL9 99 aa10.7□□□□□ -0.7
TRAF4-205ENST00000444415 MT2AP02795 61 aa10.68□□□□□ -0.7
TRAF4-205ENST00000444415 HCG22E2RYF7 251 aa10.68□□□□□ -0.7
TRAF4-205ENST00000444415 USH2AO75445 5202 aa10.63□□□□□ -0.71
TRAF4-205ENST00000444415 MT1FP04733 61 aa10.61□□□□□ -0.71
TRAF4-205ENST00000444415 IGKV2D-30A0A075B6S6 120 aa10.61□□□□□ -0.71
TRAF4-205ENST00000444415 IGKV2-30P06310 120 aa10.61□□□□□ -0.71
TRAF4-205ENST00000444415 A0A1B0GV90 55 aa10.6□□□□□ -0.71
TRAF4-205ENST00000444415 CXCL6P80162 114 aa10.59□□□□□ -0.71
TRAF4-205ENST00000444415 C7orf65Q6ZTY9 151 aa10.58□□□□□ -0.72
TRAF4-205ENST00000444415 SSPOA2VEC9 5147 aa10.52□□□□□ -0.73
TRAF4-205ENST00000444415 ACYP1P07311 99 aa10.5□□□□□ -0.73
TRAF4-205ENST00000444415 KRTAP9-3Q9BYQ3 159 aa10.49□□□□□ -0.73
TRAF4-205ENST00000444415 FAM240AA0A1B0GVK7 77 aa10.48□□□□□ -0.73
TRAF4-205ENST00000444415 H1FX-AS1Q4G0G2 97 aa10.48□□□□□ -0.73
TRAF4-205ENST00000444415 KRTAP10-10P60014 251 aa10.46□□□□□ -0.74
TRAF4-205ENST00000444415 C4orf26Q17RF5 130 aa10.44□□□□□ -0.74
TRAF4-205ENST00000444415 LCE2BO14633 110 aa10.43□□□□□ -0.74
TRAF4-205ENST00000444415 KRTAP3-1Q9BYR8 98 aa10.39□□□□□ -0.75
TRAF4-205ENST00000444415 TP53AIP1Q9HCN2 124 aa10.39□□□□□ -0.75
TRAF4-205ENST00000444415 ATP5EP2Q5VTU8 51 aa10.34□□□□□ -0.75
TRAF4-205ENST00000444415 HIST1H4AP62805 103 aaKnown RBP10.26□□□□□ -0.77
TRAF4-205ENST00000444415 LINC00643Q86TS7 51 aa10.26□□□□□ -0.77
TRAF4-205ENST00000444415 A0A087WVE0 104 aa10.24□□□□□ -0.77
TRAF4-205ENST00000444415 J3QR89 54 aa10.24□□□□□ -0.77
TRAF4-205ENST00000444415 TRAV22A0A0B4J277 110 aa10.23□□□□□ -0.77
TRAF4-205ENST00000444415 C1orf64Q8NEQ6 169 aa10.23□□□□□ -0.77
TRAF4-205ENST00000444415 CYP4F30PQ9H0H9 118 aa10.23□□□□□ -0.77
TRAF4-205ENST00000444415 FCGBPQ9Y6R7 5405 aaPredicted RBP10.22□□□□□ -0.77
TRAF4-205ENST00000444415 C5orf47Q569G3 176 aa10.17□□□□□ -0.78
TRAF4-205ENST00000444415 LCA10Q71F78 164 aa10.15□□□□□ -0.78
TRAF4-205ENST00000444415 S4R3F8 94 aa10.15□□□□□ -0.78
TRAF4-205ENST00000444415 LOC101927531A0A1B0GV80 90 aa10.14□□□□□ -0.79
TRAF4-205ENST00000444415 KRTAP19-1Q8IUB9 90 aa10.14□□□□□ -0.79
TRAF4-205ENST00000444415 UQCRQO14949 82 aa10.12□□□□□ -0.79
TRAF4-205ENST00000444415 H0Y9P7 68 aa10.1□□□□□ -0.79
TRAF4-205ENST00000444415 KRTAP3-3Q9BYR6 98 aa10.09□□□□□ -0.79
TRAF4-205ENST00000444415 OCR1Q9BZK8 76 aa10.04□□□□□ -0.8
TRAF4-205ENST00000444415 ATOX1O00244 68 aa10.03□□□□□ -0.8
TRAF4-205ENST00000444415 CSAG1Q6PB30 78 aa10.02□□□□□ -0.81
TRAF4-205ENST00000444415 K7ERU9 68 aa10□□□□□ -0.81
TRAF4-205ENST00000444415 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.99□□□□□ -0.81
TRAF4-205ENST00000444415 KRTAP19-6Q3LI70 58 aa9.99□□□□□ -0.81
TRAF4-205ENST00000444415 KLKP1Q107X0 134 aa9.96□□□□□ -0.82
TRAF4-205ENST00000444415 LINC00208Q96KT6 92 aa9.94□□□□□ -0.82
TRAF4-205ENST00000444415 FAM236AA0A1B0GUQ0 79 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms