RNA–Protein interactions for RNA: ENST00000444184.5

LINC00963-205, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 1,887 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-205ENST00000444184 SMR3BP02814 79 aaPredicted RBP11.28□□□□□ -0.6
LINC00963-205ENST00000444184 MP68P56378 58 aa11.28□□□□□ -0.6
LINC00963-205ENST00000444184 ZCCHC13Q8WW36 166 aaKnown RBP11.26□□□□□ -0.61
LINC00963-205ENST00000444184 Q5XG85 94 aa11.23□□□□□ -0.61
LINC00963-205ENST00000444184 H0Y9P7 68 aa11.23□□□□□ -0.61
LINC00963-205ENST00000444184 TYMSOSQ8TAI1 123 aa11.23□□□□□ -0.61
LINC00963-205ENST00000444184 NOTCH2NLQ7Z3S9 236 aa11.22□□□□□ -0.61
LINC00963-205ENST00000444184 ATP5EP56381 51 aaPredicted RBP11.21□□□□□ -0.61
LINC00963-205ENST00000444184 APOBP04114 4563 aaKnown RBP11.21□□□□□ -0.62
LINC00963-205ENST00000444184 LINC00208Q96KT6 92 aa11.21□□□□□ -0.62
LINC00963-205ENST00000444184 C4orf48Q5BLP8 95 aa11.2□□□□□ -0.62
LINC00963-205ENST00000444184 MRPL34Q9BQ48 92 aaKnown RBP11.2□□□□□ -0.62
LINC00963-205ENST00000444184 TP53AIP1Q9HCN2 124 aa11.2□□□□□ -0.62
LINC00963-205ENST00000444184 H3BPC8 53 aa11.19□□□□□ -0.62
LINC00963-205ENST00000444184 LIMD2Q9BT23 127 aa11.19□□□□□ -0.62
LINC00963-205ENST00000444184 NDUFS5O43920 106 aa11.18□□□□□ -0.62
LINC00963-205ENST00000444184 C1orf195Q5TG92 126 aa11.18□□□□□ -0.62
LINC00963-205ENST00000444184 SERP1Q9Y6X1 66 aa11.17□□□□□ -0.62
LINC00963-205ENST00000444184 TRAV22A0A0B4J277 110 aa11.16□□□□□ -0.62
LINC00963-205ENST00000444184 C8orf87E5RJ46 101 aa11.14□□□□□ -0.63
LINC00963-205ENST00000444184 OXTP01178 125 aa11.14□□□□□ -0.63
LINC00963-205ENST00000444184 PRR26Q8N8Z3 221 aa11.14□□□□□ -0.63
LINC00963-205ENST00000444184 SPINK1P00995 79 aa11.12□□□□□ -0.63
LINC00963-205ENST00000444184 C1orf64Q8NEQ6 169 aa11.12□□□□□ -0.63
LINC00963-205ENST00000444184 KRTAP10-4P60372 401 aaPredicted RBP11.11□□□□□ -0.63
LINC00963-205ENST00000444184 FAT1Q14517 4588 aa11.1□□□□□ -0.63
LINC00963-205ENST00000444184 LINC00313P59037 77 aa11.09□□□□□ -0.63
LINC00963-205ENST00000444184 LINC00304Q8N9R0 145 aa11.08□□□□□ -0.64
LINC00963-205ENST00000444184 SPAG11AQ6PDA7 123 aa11.04□□□□□ -0.64
LINC00963-205ENST00000444184 RPS29P62273 56 aaKnown RBP11.01□□□□□ -0.65
LINC00963-205ENST00000444184 PRR4Q16378 134 aa10.99□□□□□ -0.65
LINC00963-205ENST00000444184 CYP4F30PQ9H0H9 118 aa10.98□□□□□ -0.65
LINC00963-205ENST00000444184 SPANXA2-OT1Q8N9U9 137 aa10.97□□□□□ -0.65
LINC00963-205ENST00000444184 FAM229AH3BQW9 127 aa10.96□□□□□ -0.65
LINC00963-205ENST00000444184 Q5W150 140 aa10.96□□□□□ -0.65
LINC00963-205ENST00000444184 EPPK1P58107 5090 aaKnown RBP10.95□□□□□ -0.66
LINC00963-205ENST00000444184 Q8N9P0 234 aaPredicted RBP10.95□□□□□ -0.66
LINC00963-205ENST00000444184 HSPG2P98160 4391 aa10.93□□□□□ -0.66
LINC00963-205ENST00000444184 SMIM26A0A096LP01 95 aa10.93□□□□□ -0.66
LINC00963-205ENST00000444184 KRTAP16-1A8MUX0 517 aa10.93□□□□□ -0.66
LINC00963-205ENST00000444184 PCOTHQ58A44 107 aa10.93□□□□□ -0.66
LINC00963-205ENST00000444184 KRTAP13-3Q3SY46 172 aa10.92□□□□□ -0.66
LINC00963-205ENST00000444184 LOC101927531A0A1B0GV80 90 aa10.91□□□□□ -0.66
LINC00963-205ENST00000444184 RYR1P21817 5038 aa10.89□□□□□ -0.67
LINC00963-205ENST00000444184 PKHD1L1Q86WI1 4243 aa10.89□□□□□ -0.67
LINC00963-205ENST00000444184 IGLV7-46A0A075B6I9 117 aa10.87□□□□□ -0.67
LINC00963-205ENST00000444184 Q5VSD8 79 aa10.85□□□□□ -0.67
LINC00963-205ENST00000444184 RETNLBQ9BQ08 111 aa10.85□□□□□ -0.67
LINC00963-205ENST00000444184 FP248Q71RG6 208 aaPredicted RBP10.83□□□□□ -0.68
LINC00963-205ENST00000444184 KRTAP17-1Q9BYP8 105 aa10.83□□□□□ -0.68
LINC00963-205ENST00000444184 KIAA1109Q2LD37 5005 aa10.82□□□□□ -0.68
LINC00963-205ENST00000444184 C4orf26Q17RF5 130 aa10.79□□□□□ -0.68
LINC00963-205ENST00000444184 IGKV2-30P06310 120 aa10.74□□□□□ -0.69
LINC00963-205ENST00000444184 MPLKIPQ8TAP9 179 aa10.72□□□□□ -0.69
LINC00963-205ENST00000444184 KRTAP10-8P60410 259 aa10.72□□□□□ -0.69
LINC00963-205ENST00000444184 Q8N1X5 172 aa10.72□□□□□ -0.69
LINC00963-205ENST00000444184 C9orf92A6NGG3 77 aa10.7□□□□□ -0.7
LINC00963-205ENST00000444184 BIRC6Q9NR09 4857 aa10.69□□□□□ -0.7
LINC00963-205ENST00000444184 COA5Q86WW8 74 aa10.69□□□□□ -0.7
LINC00963-205ENST00000444184 HRES1P13985 223 aa10.67□□□□□ -0.7
LINC00963-205ENST00000444184 LRP1Q07954 4544 aaKnown RBP10.65□□□□□ -0.7
LINC00963-205ENST00000444184 IGKV2D-30A0A075B6S6 120 aa10.65□□□□□ -0.7
LINC00963-205ENST00000444184 FLG2Q5D862 2391 aaPredicted RBP10.65□□□□□ -0.7
LINC00963-205ENST00000444184 TNXBP22105 4242 aa10.65□□□□□ -0.7
LINC00963-205ENST00000444184 Q1T7F1 81 aa10.62□□□□□ -0.71
LINC00963-205ENST00000444184 A8MUU9 505 aa10.61□□□□□ -0.71
LINC00963-205ENST00000444184 C20orf166-AS1Q96NR2 134 aa10.61□□□□□ -0.71
LINC00963-205ENST00000444184 FAT3Q8TDW7 4589 aa10.58□□□□□ -0.72
LINC00963-205ENST00000444184 ACYP2P14621 99 aa10.56□□□□□ -0.72
LINC00963-205ENST00000444184 V9GYY9 64 aa10.55□□□□□ -0.72
LINC00963-205ENST00000444184 DMAC1Q96GE9 116 aa10.54□□□□□ -0.72
LINC00963-205ENST00000444184 C7orf65Q6ZTY9 151 aa10.53□□□□□ -0.72
LINC00963-205ENST00000444184 KRTAP4-5Q9BYR2 181 aa10.5□□□□□ -0.73
LINC00963-205ENST00000444184 MYCBP2O75592 4640 aa10.48□□□□□ -0.73
LINC00963-205ENST00000444184 DMBT1Q9UGM3 2413 aaPredicted RBP10.48□□□□□ -0.73
LINC00963-205ENST00000444184 MT1HL1P0DM35 61 aa10.47□□□□□ -0.73
LINC00963-205ENST00000444184 PSPHP1O15172 72 aa10.47□□□□□ -0.73
LINC00963-205ENST00000444184 Q75L30 129 aa10.46□□□□□ -0.74
LINC00963-205ENST00000444184 HERC2O95714 4834 aa10.44□□□□□ -0.74
LINC00963-205ENST00000444184 CHKB-CPT1BH3BT56 60 aa10.43□□□□□ -0.74
LINC00963-205ENST00000444184 A8MUN3 132 aa10.41□□□□□ -0.74
LINC00963-205ENST00000444184 PRR15LQ9BU68 103 aa10.38□□□□□ -0.75
LINC00963-205ENST00000444184 SPINK7P58062 85 aa10.36□□□□□ -0.75
LINC00963-205ENST00000444184 LINC01558Q9Y6Z2 57 aa10.36□□□□□ -0.75
LINC00963-205ENST00000444184 Q5VV11 94 aa10.34□□□□□ -0.75
LINC00963-205ENST00000444184 ATP11AUNQ6ZP68 121 aa10.33□□□□□ -0.76
LINC00963-205ENST00000444184 BRK1Q8WUW1 75 aa10.3□□□□□ -0.76
LINC00963-205ENST00000444184 ABCA13Q86UQ4 5058 aa10.3□□□□□ -0.76
LINC00963-205ENST00000444184 RPL37P61927 97 aaKnown RBP10.3□□□□□ -0.76
LINC00963-205ENST00000444184 XP32Q5T750 250 aa10.3□□□□□ -0.76
LINC00963-205ENST00000444184 PRO0628Q9UI54 55 aa10.23□□□□□ -0.77
LINC00963-205ENST00000444184 SVIPQ8NHG7 77 aa10.2□□□□□ -0.78
LINC00963-205ENST00000444184 KRTAP3-1Q9BYR8 98 aa10.19□□□□□ -0.78
LINC00963-205ENST00000444184 PCLOQ9Y6V0 5065 aa10.15□□□□□ -0.78
LINC00963-205ENST00000444184 COX6B2Q6YFQ2 88 aa10.14□□□□□ -0.79
LINC00963-205ENST00000444184 A6NED7 52 aa10.13□□□□□ -0.79
LINC00963-205ENST00000444184 TPRXLQ17RH7 258 aa10.12□□□□□ -0.79
LINC00963-205ENST00000444184 A0A1B0GU69 56 aa10.1□□□□□ -0.79
LINC00963-205ENST00000444184 SPTSSBQ8NFR3 76 aa10.1□□□□□ -0.79
LINC00963-205ENST00000444184 J3QL48 77 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 402 ms