RNA–Protein interactions for RNA: ENST00000441439.6

LMO3-208, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-208ENST00000441439 IGLV9-49A0A0B4J1Y8 123 aa4.58□□□□□ -1.68
LMO3-208ENST00000441439 CCDC168Q8NDH2 2452 aa4.58□□□□□ -1.68
LMO3-208ENST00000441439 PKD1L1Q8TDX9 2849 aa4.57□□□□□ -1.68
LMO3-208ENST00000441439 BAHCC1Q9P281 2608 aa4.57□□□□□ -1.68
LMO3-208ENST00000441439 ITPR2Q14571 2701 aa4.56□□□□□ -1.68
LMO3-208ENST00000441439 Q6ZRN7 208 aaPredicted RBP4.56□□□□□ -1.68
LMO3-208ENST00000441439 TEP1Q99973 2627 aaKnown RBP4.56□□□□□ -1.68
LMO3-208ENST00000441439 FAM208BQ5VWN6 2430 aa4.56□□□□□ -1.68
LMO3-208ENST00000441439 SETD2Q9BYW2 2564 aaPredicted RBP4.55□□□□□ -1.68
LMO3-208ENST00000441439 IGLV5-52A0A0A0MRZ9 124 aa4.55□□□□□ -1.68
LMO3-208ENST00000441439 TENM1Q9UKZ4 2725 aa4.55□□□□□ -1.68
LMO3-208ENST00000441439 PANO1I0J062 215 aa4.55□□□□□ -1.68
LMO3-208ENST00000441439 ZNF861PO60384 105 aa4.55□□□□□ -1.68
LMO3-208ENST00000441439 PKD1P98161 4303 aa4.55□□□□□ -1.68
LMO3-208ENST00000441439 APLNQ9ULZ1 77 aa4.55□□□□□ -1.68
LMO3-208ENST00000441439 PKHD1P08F94 4074 aa4.54□□□□□ -1.68
LMO3-208ENST00000441439 IGLV7-43P04211 117 aa4.54□□□□□ -1.68
LMO3-208ENST00000441439 PLECQ15149 4684 aaKnown RBP4.54□□□□□ -1.68
LMO3-208ENST00000441439 FBN1P35555 2871 aaKnown RBP4.53□□□□□ -1.68
LMO3-208ENST00000441439 DNAH11Q96DT5 4516 aa4.53□□□□□ -1.68
LMO3-208ENST00000441439 TENM3Q9P273 2699 aa4.53□□□□□ -1.68
LMO3-208ENST00000441439 KRTAP16-1A8MUX0 517 aa4.52□□□□□ -1.69
LMO3-208ENST00000441439 SSBP3-AS1Q7Z2R9 100 aa4.52□□□□□ -1.69
LMO3-208ENST00000441439 H3BS24 57 aa4.52□□□□□ -1.69
LMO3-208ENST00000441439 IGKV2D-30A0A075B6S6 120 aa4.51□□□□□ -1.69
LMO3-208ENST00000441439 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.51□□□□□ -1.69
LMO3-208ENST00000441439 STARD9Q9P2P6 4700 aa4.51□□□□□ -1.69
LMO3-208ENST00000441439 CSAG1Q6PB30 78 aa4.51□□□□□ -1.69
LMO3-208ENST00000441439 PSORS1C2Q9UIG4 136 aa4.5□□□□□ -1.69
LMO3-208ENST00000441439 NOTCH2Q04721 2471 aa4.5□□□□□ -1.69
LMO3-208ENST00000441439 SACSQ9NZJ4 4579 aa4.49□□□□□ -1.69
LMO3-208ENST00000441439 NBDYA0A0U1RRE5 68 aa4.49□□□□□ -1.69
LMO3-208ENST00000441439 KRTAP21-3Q3LHN1 58 aa4.49□□□□□ -1.69
LMO3-208ENST00000441439 SRRM2Q9UQ35 2752 aaKnown RBP4.48□□□□□ -1.69
LMO3-208ENST00000441439 MTORP42345 2549 aa4.48□□□□□ -1.69
LMO3-208ENST00000441439 FAT2Q9NYQ8 4349 aa4.48□□□□□ -1.69
LMO3-208ENST00000441439 A8MUU9 505 aa4.47□□□□□ -1.69
LMO3-208ENST00000441439 LY6G6CO95867 125 aa4.47□□□□□ -1.69
LMO3-208ENST00000441439 ACANP16112 2415 aa4.47□□□□□ -1.69
LMO3-208ENST00000441439 FBN3Q75N90 2809 aa4.46□□□□□ -1.7
LMO3-208ENST00000441439 UBE2DNLQ8IWF7 75 aa4.46□□□□□ -1.7
LMO3-208ENST00000441439 MAST4O15021 2626 aa4.46□□□□□ -1.7
LMO3-208ENST00000441439 KRTAP25-1Q3LHN0 102 aa4.45□□□□□ -1.7
LMO3-208ENST00000441439 HECTD1Q9ULT8 2610 aa4.44□□□□□ -1.7
LMO3-208ENST00000441439 COL7A1Q02388 2944 aa4.44□□□□□ -1.7
LMO3-208ENST00000441439 DNAH5Q8TE73 4624 aa4.43□□□□□ -1.7
LMO3-208ENST00000441439 HELZ2Q9BYK8 2649 aaKnown RBP4.42□□□□□ -1.7
LMO3-208ENST00000441439 A0A087WTM6 91 aa4.42□□□□□ -1.7
LMO3-208ENST00000441439 SPINK6Q6UWN8 80 aa4.42□□□□□ -1.7
LMO3-208ENST00000441439 ANAPC11Q9NYG5 84 aa4.41□□□□□ -1.7
LMO3-208ENST00000441439 F8P00451 2351 aa4.41□□□□□ -1.7
LMO3-208ENST00000441439 H0YAA0 97 aa4.4□□□□□ -1.71
LMO3-208ENST00000441439 ROMO1P60602 79 aa4.4□□□□□ -1.71
LMO3-208ENST00000441439 Q6ZSA8 131 aa4.39□□□□□ -1.71
LMO3-208ENST00000441439 CIRBP-AS1Q8TBR5 109 aa4.39□□□□□ -1.71
LMO3-208ENST00000441439 LINC00304Q8N9R0 145 aa4.39□□□□□ -1.71
LMO3-208ENST00000441439 NUPR2A6NF83 97 aa4.38□□□□□ -1.71
LMO3-208ENST00000441439 C1orf134Q5TEV5 83 aa4.38□□□□□ -1.71
LMO3-208ENST00000441439 LCE2DQ5TA82 110 aaPredicted RBP4.36□□□□□ -1.71
LMO3-208ENST00000441439 ATRQ13535 2644 aa4.36□□□□□ -1.71
LMO3-208ENST00000441439 KMT2AQ03164 3969 aa4.36□□□□□ -1.71
LMO3-208ENST00000441439 KRTAP13-2Q52LG2 175 aa4.35□□□□□ -1.71
LMO3-208ENST00000441439 RPS29P62273 56 aaKnown RBP4.33□□□□□ -1.72
LMO3-208ENST00000441439 FASNP49327 2511 aaKnown RBP4.33□□□□□ -1.72
LMO3-208ENST00000441439 H1FX-AS1Q4G0G2 97 aa4.33□□□□□ -1.72
LMO3-208ENST00000441439 FLNBO75369 2602 aaKnown RBP4.32□□□□□ -1.72
LMO3-208ENST00000441439 A0A1B0GU33 70 aa4.31□□□□□ -1.72
LMO3-208ENST00000441439 VPS13BQ7Z7G8 4022 aa4.3□□□□□ -1.72
LMO3-208ENST00000441439 APOBP04114 4563 aaKnown RBP4.3□□□□□ -1.72
LMO3-208ENST00000441439 KRTAP1-4P0C5Y4 121 aa4.29□□□□□ -1.72
LMO3-208ENST00000441439 HSPG2P98160 4391 aa4.28□□□□□ -1.72
LMO3-208ENST00000441439 TYMSOSQ8TAI1 123 aa4.28□□□□□ -1.72
LMO3-208ENST00000441439 SPINK1P00995 79 aa4.27□□□□□ -1.73
LMO3-208ENST00000441439 TNXBP22105 4242 aa4.26□□□□□ -1.73
LMO3-208ENST00000441439 C20orf166-AS1Q96NR2 134 aa4.25□□□□□ -1.73
LMO3-208ENST00000441439 KRTAP3-1Q9BYR8 98 aa4.25□□□□□ -1.73
LMO3-208ENST00000441439 P0C880 135 aa4.25□□□□□ -1.73
LMO3-208ENST00000441439 MEGF8Q7Z7M0 2845 aa4.24□□□□□ -1.73
LMO3-208ENST00000441439 Q8N1X5 172 aa4.24□□□□□ -1.73
LMO3-208ENST00000441439 K7ERS5 55 aa4.24□□□□□ -1.73
LMO3-208ENST00000441439 HYDINQ4G0P3 5121 aa4.24□□□□□ -1.73
LMO3-208ENST00000441439 DYNC1H1Q14204 4646 aaKnown RBP4.24□□□□□ -1.73
LMO3-208ENST00000441439 FAT3Q8TDW7 4589 aa4.23□□□□□ -1.73
LMO3-208ENST00000441439 DNHD1Q96M86 4753 aa4.22□□□□□ -1.73
LMO3-208ENST00000441439 COX6B2Q6YFQ2 88 aa4.21□□□□□ -1.74
LMO3-208ENST00000441439 NBEAL1Q6ZS30 2694 aa4.19□□□□□ -1.74
LMO3-208ENST00000441439 LRP1BQ9NZR2 4599 aa4.16□□□□□ -1.74
LMO3-208ENST00000441439 KRTAP10-4P60372 401 aaPredicted RBP4.15□□□□□ -1.74
LMO3-208ENST00000441439 RPL37P61927 97 aaKnown RBP4.15□□□□□ -1.74
LMO3-208ENST00000441439 KRTAP15-1Q3LI76 137 aa4.15□□□□□ -1.74
LMO3-208ENST00000441439 STAB2Q8WWQ8 2551 aa4.13□□□□□ -1.75
LMO3-208ENST00000441439 A0A1B0GVY2 172 aa4.13□□□□□ -1.75
LMO3-208ENST00000441439 KRTAP10-6P60371 365 aaPredicted RBP4.13□□□□□ -1.75
LMO3-208ENST00000441439 TPRXLQ17RH7 258 aa4.13□□□□□ -1.75
LMO3-208ENST00000441439 KRTAP10-2P60368 255 aa4.12□□□□□ -1.75
LMO3-208ENST00000441439 RYR2Q92736 4967 aa4.12□□□□□ -1.75
LMO3-208ENST00000441439 STAB1Q9NY15 2570 aa4.12□□□□□ -1.75
LMO3-208ENST00000441439 TGP01266 2768 aa4.11□□□□□ -1.75
LMO3-208ENST00000441439 KRTAP10-1P60331 282 aa4.1□□□□□ -1.75
LMO3-208ENST00000441439 NOTCH1P46531 2555 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms