RNA–Protein interactions for RNA: ENST00000441024.6

CNOT1-202, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNOT1, Length 4,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-202ENST00000441024 Q8N1X5 172 aa3.89□□□□□ -1.79
CNOT1-202ENST00000441024 ZCCHC13Q8WW36 166 aaKnown RBP3.89□□□□□ -1.79
CNOT1-202ENST00000441024 PKHD1P08F94 4074 aa3.89□□□□□ -1.79
CNOT1-202ENST00000441024 DNAH17Q9UFH2 4485 aa3.88□□□□□ -1.79
CNOT1-202ENST00000441024 KRTAP4-16G5E9R7 235 aaPredicted RBP3.88□□□□□ -1.79
CNOT1-202ENST00000441024 Q75L30 129 aa3.88□□□□□ -1.79
CNOT1-202ENST00000441024 CRIPTQ9P021 101 aa3.88□□□□□ -1.79
CNOT1-202ENST00000441024 LINC01558Q9Y6Z2 57 aa3.88□□□□□ -1.79
CNOT1-202ENST00000441024 STARD9Q9P2P6 4700 aa3.88□□□□□ -1.79
CNOT1-202ENST00000441024 UNC79Q9P2D8 2635 aa3.87□□□□□ -1.79
CNOT1-202ENST00000441024 VWFP04275 2813 aa3.87□□□□□ -1.79
CNOT1-202ENST00000441024 LCA10Q71F78 164 aa3.87□□□□□ -1.79
CNOT1-202ENST00000441024 MAST4O15021 2626 aa3.86□□□□□ -1.79
CNOT1-202ENST00000441024 SETXQ7Z333 2677 aaKnown RBP3.86□□□□□ -1.79
CNOT1-202ENST00000441024 PKHD1L1Q86WI1 4243 aa3.86□□□□□ -1.79
CNOT1-202ENST00000441024 DNAH11Q96DT5 4516 aa3.86□□□□□ -1.79
CNOT1-202ENST00000441024 TEX15Q9BXT5 2789 aa3.86□□□□□ -1.79
CNOT1-202ENST00000441024 ITPR2Q14571 2701 aa3.85□□□□□ -1.79
CNOT1-202ENST00000441024 SPINT4Q6UDR6 99 aa3.85□□□□□ -1.79
CNOT1-202ENST00000441024 Q8N9P0 234 aaPredicted RBP3.84□□□□□ -1.79
CNOT1-202ENST00000441024 Q5W150 140 aa3.84□□□□□ -1.79
CNOT1-202ENST00000441024 Q6ZR54 194 aa3.84□□□□□ -1.79
CNOT1-202ENST00000441024 Q6ZSA8 131 aa3.84□□□□□ -1.79
CNOT1-202ENST00000441024 ATRQ13535 2644 aa3.84□□□□□ -1.79
CNOT1-202ENST00000441024 TENM1Q9UKZ4 2725 aa3.84□□□□□ -1.79
CNOT1-202ENST00000441024 DNAH10Q8IVF4 4471 aa3.83□□□□□ -1.8
CNOT1-202ENST00000441024 PLECQ15149 4684 aaKnown RBP3.83□□□□□ -1.8
CNOT1-202ENST00000441024 MGAM2Q2M2H8 2515 aa3.83□□□□□ -1.8
CNOT1-202ENST00000441024 LCE6AA0A183 80 aa3.83□□□□□ -1.8
CNOT1-202ENST00000441024 Q5XG85 94 aa3.83□□□□□ -1.8
CNOT1-202ENST00000441024 A0A1B0GU33 70 aa3.82□□□□□ -1.8
CNOT1-202ENST00000441024 DNAH8Q96JB1 4490 aa3.82□□□□□ -1.8
CNOT1-202ENST00000441024 KRTAP10-1P60331 282 aa3.81□□□□□ -1.8
CNOT1-202ENST00000441024 CYSTM1Q9H1C7 97 aa3.81□□□□□ -1.8
CNOT1-202ENST00000441024 KMT2AQ03164 3969 aa3.81□□□□□ -1.8
CNOT1-202ENST00000441024 FP248Q71RG6 208 aaPredicted RBP3.81□□□□□ -1.8
CNOT1-202ENST00000441024 KRTAP29-1A8MX34 341 aaPredicted RBP3.8□□□□□ -1.8
CNOT1-202ENST00000441024 KRTAP21-3Q3LHN1 58 aa3.8□□□□□ -1.8
CNOT1-202ENST00000441024 PKD1L1Q8TDX9 2849 aa3.8□□□□□ -1.8
CNOT1-202ENST00000441024 HYDINQ4G0P3 5121 aa3.79□□□□□ -1.8
CNOT1-202ENST00000441024 ASB16-AS1Q495Z4 193 aa3.79□□□□□ -1.8
CNOT1-202ENST00000441024 DMAC1Q96GE9 116 aa3.79□□□□□ -1.8
CNOT1-202ENST00000441024 KRTAP10-2P60368 255 aa3.79□□□□□ -1.8
CNOT1-202ENST00000441024 ALMS1Q8TCU4 4167 aa3.78□□□□□ -1.8
CNOT1-202ENST00000441024 A0A0D9SG42 100 aa3.78□□□□□ -1.8
CNOT1-202ENST00000441024 CSAG1Q6PB30 78 aa3.78□□□□□ -1.8
CNOT1-202ENST00000441024 S4R3F8 94 aa3.78□□□□□ -1.81
CNOT1-202ENST00000441024 SPINK7P58062 85 aa3.77□□□□□ -1.81
CNOT1-202ENST00000441024 Q5VV11 94 aa3.77□□□□□ -1.81
CNOT1-202ENST00000441024 RPS29P62273 56 aaKnown RBP3.77□□□□□ -1.81
CNOT1-202ENST00000441024 Q6ZRN7 208 aaPredicted RBP3.77□□□□□ -1.81
CNOT1-202ENST00000441024 NSD1Q96L73 2696 aaPredicted RBP3.77□□□□□ -1.81
CNOT1-202ENST00000441024 PANO1I0J062 215 aa3.77□□□□□ -1.81
CNOT1-202ENST00000441024 MAP1AP78559 2803 aaPredicted RBP3.76□□□□□ -1.81
CNOT1-202ENST00000441024 FAT3Q8TDW7 4589 aa3.75□□□□□ -1.81
CNOT1-202ENST00000441024 SEC61BP60468 96 aaKnown RBP3.75□□□□□ -1.81
CNOT1-202ENST00000441024 Q5VSD8 79 aa3.75□□□□□ -1.81
CNOT1-202ENST00000441024 LINC01554Q52M75 96 aa3.74□□□□□ -1.81
CNOT1-202ENST00000441024 DNAH5Q8TE73 4624 aa3.74□□□□□ -1.81
CNOT1-202ENST00000441024 VPS13BQ7Z7G8 4022 aa3.74□□□□□ -1.81
CNOT1-202ENST00000441024 KRTAP7-1Q8IUC3 87 aa3.73□□□□□ -1.81
CNOT1-202ENST00000441024 SACSQ9NZJ4 4579 aa3.73□□□□□ -1.81
CNOT1-202ENST00000441024 KRTAP13-1Q8IUC0 172 aa3.72□□□□□ -1.81
CNOT1-202ENST00000441024 OXTP01178 125 aa3.72□□□□□ -1.81
CNOT1-202ENST00000441024 TEP1Q99973 2627 aaKnown RBP3.71□□□□□ -1.82
CNOT1-202ENST00000441024 HIVEP1P15822 2718 aa3.71□□□□□ -1.82
CNOT1-202ENST00000441024 KRTAP11-1Q8IUC1 163 aa3.7□□□□□ -1.82
CNOT1-202ENST00000441024 A0A087X002 238 aa3.7□□□□□ -1.82
CNOT1-202ENST00000441024 CAMK2N1Q7Z7J9 78 aa3.69□□□□□ -1.82
CNOT1-202ENST00000441024 MEGF8Q7Z7M0 2845 aa3.68□□□□□ -1.82
CNOT1-202ENST00000441024 H1FX-AS1Q4G0G2 97 aa3.68□□□□□ -1.82
CNOT1-202ENST00000441024 RPL37P61927 97 aaKnown RBP3.66□□□□□ -1.82
CNOT1-202ENST00000441024 NOTCH2NLQ7Z3S9 236 aa3.65□□□□□ -1.82
CNOT1-202ENST00000441024 R4GN34 69 aa3.65□□□□□ -1.83
CNOT1-202ENST00000441024 COL6A5A8TX70 2615 aa3.64□□□□□ -1.83
CNOT1-202ENST00000441024 M0R2T5 61 aa3.64□□□□□ -1.83
CNOT1-202ENST00000441024 KRTAP13-2Q52LG2 175 aa3.64□□□□□ -1.83
CNOT1-202ENST00000441024 LUZP6Q538Z0 58 aa3.64□□□□□ -1.83
CNOT1-202ENST00000441024 ROMO1P60602 79 aa3.63□□□□□ -1.83
CNOT1-202ENST00000441024 SPATA8Q6RVD6 105 aa3.63□□□□□ -1.83
CNOT1-202ENST00000441024 RYR2Q92736 4967 aa3.62□□□□□ -1.83
CNOT1-202ENST00000441024 STAB1Q9NY15 2570 aa3.61□□□□□ -1.83
CNOT1-202ENST00000441024 PRAC1Q96KF2 57 aa3.61□□□□□ -1.83
CNOT1-202ENST00000441024 RYR3Q15413 4870 aa3.6□□□□□ -1.83
CNOT1-202ENST00000441024 KMT2CQ8NEZ4 4911 aaKnown RBP3.6□□□□□ -1.83
CNOT1-202ENST00000441024 M0QZ58 72 aa3.58□□□□□ -1.84
CNOT1-202ENST00000441024 NBEAL1Q6ZS30 2694 aa3.58□□□□□ -1.84
CNOT1-202ENST00000441024 ADM2Q7Z4H4 148 aa3.58□□□□□ -1.84
CNOT1-202ENST00000441024 HSPG2P98160 4391 aa3.57□□□□□ -1.84
CNOT1-202ENST00000441024 APOBP04114 4563 aaKnown RBP3.57□□□□□ -1.84
CNOT1-202ENST00000441024 NOTCH1P46531 2555 aa3.57□□□□□ -1.84
CNOT1-202ENST00000441024 A8MUU9 505 aa3.56□□□□□ -1.84
CNOT1-202ENST00000441024 DYNC1H1Q14204 4646 aaKnown RBP3.55□□□□□ -1.84
CNOT1-202ENST00000441024 NBEAL2Q6ZNJ1 2754 aa3.55□□□□□ -1.84
CNOT1-202ENST00000441024 C20orf166-AS1Q96NR2 134 aa3.55□□□□□ -1.84
CNOT1-202ENST00000441024 A6NN06 94 aa3.53□□□□□ -1.84
CNOT1-202ENST00000441024 TNXBP22105 4242 aa3.52□□□□□ -1.85
CNOT1-202ENST00000441024 PLAC4Q8WY50 150 aa3.52□□□□□ -1.85
CNOT1-202ENST00000441024 KRTAP1-4P0C5Y4 121 aa3.51□□□□□ -1.85
CNOT1-202ENST00000441024 TENM3Q9P273 2699 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms