RNA–Protein interactions for RNA: ENST00000440731.4

PGBD4P3-201, Transcript of piggyBac transposable element derived 4 pseudogene 3, humanhuman

BASIC

Gene PGBD4P3, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4P3-201ENST00000440731 F8P00451 2351 aa0.96□□□□□ -2.26
PGBD4P3-201ENST00000440731 APC2O95996 2303 aa0.95□□□□□ -2.26
PGBD4P3-201ENST00000440731 MACF1Q9UPN3 7388 aaKnown RBP0.95□□□□□ -2.26
PGBD4P3-201ENST00000440731 H3BNG1 76 aa0.95□□□□□ -2.26
PGBD4P3-201ENST00000440731 LINC01556Q5JQF7 62 aa0.95□□□□□ -2.26
PGBD4P3-201ENST00000440731 CEP290O15078 2479 aa0.95□□□□□ -2.26
PGBD4P3-201ENST00000440731 TNRC18O15417 2968 aaPredicted RBP0.95□□□□□ -2.26
PGBD4P3-201ENST00000440731 FAM186AA6NE01 2351 aa0.94□□□□□ -2.26
PGBD4P3-201ENST00000440731 CRYBG3Q68DQ2 2970 aa0.94□□□□□ -2.26
PGBD4P3-201ENST00000440731 RIF1Q5UIP0 2472 aaKnown RBP0.94□□□□□ -2.26
PGBD4P3-201ENST00000440731 COL6A5A8TX70 2615 aa0.94□□□□□ -2.26
PGBD4P3-201ENST00000440731 AKAP9Q99996 3911 aa0.94□□□□□ -2.26
PGBD4P3-201ENST00000440731 NBPF19A0A087WUL8 3843 aa0.93□□□□□ -2.26
PGBD4P3-201ENST00000440731 NBEAQ8NFP9 2946 aa0.93□□□□□ -2.26
PGBD4P3-201ENST00000440731 SRRM2Q9UQ35 2752 aaKnown RBP0.93□□□□□ -2.26
PGBD4P3-201ENST00000440731 MAST4O15021 2626 aa0.93□□□□□ -2.26
PGBD4P3-201ENST00000440731 VWFP04275 2813 aa0.93□□□□□ -2.26
PGBD4P3-201ENST00000440731 CCDC168Q8NDH2 2452 aa0.93□□□□□ -2.26
PGBD4P3-201ENST00000440731 ABCA12Q86UK0 2595 aa0.93□□□□□ -2.26
PGBD4P3-201ENST00000440731 EP300Q09472 2414 aaPredicted RBP0.93□□□□□ -2.26
PGBD4P3-201ENST00000440731 MAP1AP78559 2803 aaPredicted RBP0.93□□□□□ -2.26
PGBD4P3-201ENST00000440731 ITPR1Q14643 2758 aa0.92□□□□□ -2.26
PGBD4P3-201ENST00000440731 NAV2Q8IVL1 2488 aa0.92□□□□□ -2.26
PGBD4P3-201ENST00000440731 SPART-AS1P0CW21 52 aa0.92□□□□□ -2.26
PGBD4P3-201ENST00000440731 U3KQA8 63 aa0.92□□□□□ -2.26
PGBD4P3-201ENST00000440731 ANKHD1Q8IWZ3 2542 aaKnown RBP0.92□□□□□ -2.26
PGBD4P3-201ENST00000440731 DMBT1Q9UGM3 2413 aaPredicted RBP0.91□□□□□ -2.26
PGBD4P3-201ENST00000440731 PRRC2CQ9Y520 2896 aaKnown RBP0.91□□□□□ -2.26
PGBD4P3-201ENST00000440731 HECTD1Q9ULT8 2610 aa0.91□□□□□ -2.26
PGBD4P3-201ENST00000440731 NBASA2RRP1 2371 aa0.91□□□□□ -2.26
PGBD4P3-201ENST00000440731 SPTBN5Q9NRC6 3674 aaKnown RBP0.91□□□□□ -2.26
PGBD4P3-201ENST00000440731 DMDP11532 3685 aa0.91□□□□□ -2.26
PGBD4P3-201ENST00000440731 STAB1Q9NY15 2570 aa0.91□□□□□ -2.26
PGBD4P3-201ENST00000440731 PRUNE2Q8WUY3 3088 aa0.9□□□□□ -2.26
PGBD4P3-201ENST00000440731 DNAH11Q96DT5 4516 aa0.9□□□□□ -2.27
PGBD4P3-201ENST00000440731 TTC28Q96AY4 2481 aa0.9□□□□□ -2.27
PGBD4P3-201ENST00000440731 ZZEF1O43149 2961 aa0.9□□□□□ -2.27
PGBD4P3-201ENST00000440731 UTRNP46939 3433 aa0.9□□□□□ -2.27
PGBD4P3-201ENST00000440731 CFAP54Q96N23 3096 aa0.9□□□□□ -2.27
PGBD4P3-201ENST00000440731 VPS13AQ96RL7 3174 aa0.9□□□□□ -2.27
PGBD4P3-201ENST00000440731 HIVEP3Q5T1R4 2406 aa0.89□□□□□ -2.27
PGBD4P3-201ENST00000440731 FRYLO94915 3013 aa0.89□□□□□ -2.27
PGBD4P3-201ENST00000440731 VPS13DQ5THJ4 4388 aa0.89□□□□□ -2.27
PGBD4P3-201ENST00000440731 GOLGB1Q14789 3259 aaKnown RBP0.89□□□□□ -2.27
PGBD4P3-201ENST00000440731 ZFHX4Q86UP3 3567 aa0.88□□□□□ -2.27
PGBD4P3-201ENST00000440731 SPG11Q96JI7 2443 aa0.88□□□□□ -2.27
PGBD4P3-201ENST00000440731 RANBP2P49792 3224 aaKnown RBP0.88□□□□□ -2.27
PGBD4P3-201ENST00000440731 TNP1P09430 55 aa0.88□□□□□ -2.27
PGBD4P3-201ENST00000440731 HTN3P15516 51 aa0.88□□□□□ -2.27
PGBD4P3-201ENST00000440731 KRTAP10-4P60372 401 aaPredicted RBP0.88□□□□□ -2.27
PGBD4P3-201ENST00000440731 LRRK2Q5S007 2527 aa0.88□□□□□ -2.27
PGBD4P3-201ENST00000440731 SONP18583 2426 aaKnown RBP0.88□□□□□ -2.27
PGBD4P3-201ENST00000440731 HTTP42858 3142 aa0.88□□□□□ -2.27
PGBD4P3-201ENST00000440731 NF1P21359 2839 aa0.88□□□□□ -2.27
PGBD4P3-201ENST00000440731 AKAP13Q12802 2813 aa0.88□□□□□ -2.27
PGBD4P3-201ENST00000440731 TRIOO75962 3097 aa0.87□□□□□ -2.27
PGBD4P3-201ENST00000440731 PIEZO1Q92508 2521 aa0.87□□□□□ -2.27
PGBD4P3-201ENST00000440731 CELSR1Q9NYQ6 3014 aa0.87□□□□□ -2.27
PGBD4P3-201ENST00000440731 SZT2Q5T011 3432 aa0.87□□□□□ -2.27
PGBD4P3-201ENST00000440731 MEGF8Q7Z7M0 2845 aa0.87□□□□□ -2.27
PGBD4P3-201ENST00000440731 USP9YO00507 2555 aaPredicted RBP0.87□□□□□ -2.27
PGBD4P3-201ENST00000440731 ZNF292O60281 2723 aa0.87□□□□□ -2.27
PGBD4P3-201ENST00000440731 DOPEY1Q5JWR5 2465 aa0.87□□□□□ -2.27
PGBD4P3-201ENST00000440731 CHD9Q3L8U1 2897 aa0.86□□□□□ -2.27
PGBD4P3-201ENST00000440731 BDP1A6H8Y1 2624 aa0.86□□□□□ -2.27
PGBD4P3-201ENST00000440731 BOD1L1Q8NFC6 3051 aa0.86□□□□□ -2.27
PGBD4P3-201ENST00000440731 LRBAP50851 2863 aa0.86□□□□□ -2.27
PGBD4P3-201ENST00000440731 RPS29P62273 56 aaKnown RBP0.86□□□□□ -2.27
PGBD4P3-201ENST00000440731 MYCBP2O75592 4640 aa0.86□□□□□ -2.27
PGBD4P3-201ENST00000440731 EPG5Q9HCE0 2579 aa0.86□□□□□ -2.27
PGBD4P3-201ENST00000440731 CENPFP49454 3210 aa0.85□□□□□ -2.27
PGBD4P3-201ENST00000440731 USP34Q70CQ2 3546 aa0.85□□□□□ -2.27
PGBD4P3-201ENST00000440731 AHNAKQ09666 5890 aaKnown RBP0.85□□□□□ -2.27
PGBD4P3-201ENST00000440731 DEFB135Q30KP9 77 aa0.85□□□□□ -2.27
PGBD4P3-201ENST00000440731 CFAP47Q6ZTR5 3102 aa0.85□□□□□ -2.27
PGBD4P3-201ENST00000440731 NIPBLQ6KC79 2804 aaeCLIP0.85□□□□□ -2.27
PGBD4P3-201ENST00000440731 ITPR3Q14573 2671 aa0.85□□□□□ -2.27
PGBD4P3-201ENST00000440731 ANKRD11Q6UB99 2663 aaPredicted RBP0.85□□□□□ -2.27
PGBD4P3-201ENST00000440731 FLNBO75369 2602 aaKnown RBP0.85□□□□□ -2.27
PGBD4P3-201ENST00000440731 MUC2Q02817 5179 aa0.85□□□□□ -2.27
PGBD4P3-201ENST00000440731 MKI67P46013 3256 aaKnown RBP0.84□□□□□ -2.27
PGBD4P3-201ENST00000440731 SPENQ96T58 3664 aaKnown RBP0.84□□□□□ -2.27
PGBD4P3-201ENST00000440731 KIAA1109Q2LD37 5005 aa0.84□□□□□ -2.27
PGBD4P3-201ENST00000440731 WDFY4Q6ZS81 3184 aa0.84□□□□□ -2.28
PGBD4P3-201ENST00000440731 TLN1Q9Y490 2541 aaKnown RBP0.84□□□□□ -2.28
PGBD4P3-201ENST00000440731 SYNE2Q8WXH0 6885 aaKnown RBP0.84□□□□□ -2.28
PGBD4P3-201ENST00000440731 SMG1Q96Q15 3661 aaKnown RBP0.84□□□□□ -2.28
PGBD4P3-201ENST00000440731 C5orf42Q9H799 3197 aa0.84□□□□□ -2.28
PGBD4P3-201ENST00000440731 RELNP78509 3460 aa0.83□□□□□ -2.28
PGBD4P3-201ENST00000440731 CELSR3Q9NYQ7 3312 aa0.83□□□□□ -2.28
PGBD4P3-201ENST00000440731 C9orf92A6NGG3 77 aa0.83□□□□□ -2.28
PGBD4P3-201ENST00000440731 DEFB4AO15263 64 aa0.83□□□□□ -2.28
PGBD4P3-201ENST00000440731 COL12A1Q99715 3063 aa0.83□□□□□ -2.28
PGBD4P3-201ENST00000440731 SPEGQ15772 3267 aa0.83□□□□□ -2.28
PGBD4P3-201ENST00000440731 CSMD3Q7Z407 3707 aa0.83□□□□□ -2.28
PGBD4P3-201ENST00000440731 PCNTO95613 3336 aa0.83□□□□□ -2.28
PGBD4P3-201ENST00000440731 POLQO75417 2590 aa0.83□□□□□ -2.28
PGBD4P3-201ENST00000440731 VPS13BQ7Z7G8 4022 aa0.83□□□□□ -2.28
PGBD4P3-201ENST00000440731 ACANP16112 2415 aa0.83□□□□□ -2.28
PGBD4P3-201ENST00000440731 DSTQ03001 7570 aaKnown RBP0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms