RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 A0A1W2PPM0 123 aa12.29□□□□□ -0.44
VARS-217ENST00000440048 PDE6GP18545 87 aa12.29□□□□□ -0.44
VARS-217ENST00000440048 C14orf132Q9NPU4 83 aa12.29□□□□□ -0.44
VARS-217ENST00000440048 A0A1B0GVX0 72 aa12.27□□□□□ -0.45
VARS-217ENST00000440048 COX6B2Q6YFQ2 88 aa12.27□□□□□ -0.45
VARS-217ENST00000440048 A0A1B0GW54 56 aa12.26□□□□□ -0.45
VARS-217ENST00000440048 J3KT08 172 aa12.26□□□□□ -0.45
VARS-217ENST00000440048 C8orf87E5RJ46 101 aa12.23□□□□□ -0.45
VARS-217ENST00000440048 H3BT86 120 aa12.22□□□□□ -0.45
VARS-217ENST00000440048 LCE2DQ5TA82 110 aaPredicted RBP12.22□□□□□ -0.45
VARS-217ENST00000440048 MTURNQ8N3F0 131 aa12.21□□□□□ -0.45
VARS-217ENST00000440048 FLGP20930 4061 aaPredicted RBP12.19□□□□□ -0.46
VARS-217ENST00000440048 KRTAP9-6A0A140TA67 174 aa12.18□□□□□ -0.46
VARS-217ENST00000440048 NDUFB1O75438 58 aa12.15□□□□□ -0.46
VARS-217ENST00000440048 SPCS1Q9Y6A9 102 aa12.13□□□□□ -0.47
VARS-217ENST00000440048 A8MWP4 228 aa12.12□□□□□ -0.47
VARS-217ENST00000440048 NREPQ16612 68 aa12.11□□□□□ -0.47
VARS-217ENST00000440048 M0R2T5 61 aa12.1□□□□□ -0.47
VARS-217ENST00000440048 COL5A1-AS1Q5SY13 56 aa12.1□□□□□ -0.47
VARS-217ENST00000440048 IGKV3D-7A0A0C4DH55 119 aa12.09□□□□□ -0.47
VARS-217ENST00000440048 KRTAP10-6P60371 365 aaPredicted RBP12.07□□□□□ -0.48
VARS-217ENST00000440048 C8orf17Q9NRJ1 99 aa12.07□□□□□ -0.48
VARS-217ENST00000440048 LORP23490 312 aaPredicted RBP12.05□□□□□ -0.48
VARS-217ENST00000440048 SMCPP49901 116 aaPredicted RBP12.03□□□□□ -0.48
VARS-217ENST00000440048 PRR15Q8IV56 129 aa12.02□□□□□ -0.49
VARS-217ENST00000440048 Q8N9P0 234 aaPredicted RBP12.02□□□□□ -0.49
VARS-217ENST00000440048 ZCCHC13Q8WW36 166 aaKnown RBP12.01□□□□□ -0.49
VARS-217ENST00000440048 HRES1P13985 223 aa11.97□□□□□ -0.49
VARS-217ENST00000440048 K7EP34 96 aa11.96□□□□□ -0.49
VARS-217ENST00000440048 Q6ZVQ6 151 aa11.96□□□□□ -0.49
VARS-217ENST00000440048 PRO0461Q9UI25 63 aa11.96□□□□□ -0.49
VARS-217ENST00000440048 MPLKIPQ8TAP9 179 aa11.93□□□□□ -0.5
VARS-217ENST00000440048 MMP24-AS1A0A0U1RRL7 71 aa11.92□□□□□ -0.5
VARS-217ENST00000440048 PCP4L1A6NKN8 68 aa11.92□□□□□ -0.5
VARS-217ENST00000440048 K7EQZ3 153 aa11.91□□□□□ -0.5
VARS-217ENST00000440048 FAM236DA0A1B0GTK5 79 aa11.9□□□□□ -0.5
VARS-217ENST00000440048 BPY2O14599 106 aa11.9□□□□□ -0.5
VARS-217ENST00000440048 FAM236CP0DP71 79 aa11.9□□□□□ -0.5
VARS-217ENST00000440048 RBM12B-AS1Q9P1G2 102 aa11.9□□□□□ -0.5
VARS-217ENST00000440048 CRCT1Q9UGL9 99 aa11.9□□□□□ -0.5
VARS-217ENST00000440048 TMEM254Q8TBM7 123 aa11.88□□□□□ -0.51
VARS-217ENST00000440048 FSIP2Q5CZC0 6907 aa11.88□□□□□ -0.51
VARS-217ENST00000440048 SPINK7P58062 85 aa11.87□□□□□ -0.51
VARS-217ENST00000440048 MRPL34Q9BQ48 92 aaKnown RBP11.87□□□□□ -0.51
VARS-217ENST00000440048 hDV103S1A0JD37 113 aa11.84□□□□□ -0.51
VARS-217ENST00000440048 GTF2H5Q6ZYL4 71 aa11.82□□□□□ -0.52
VARS-217ENST00000440048 Q8N9L7 120 aa11.78□□□□□ -0.52
VARS-217ENST00000440048 LINC00846Q9NV44 126 aa11.78□□□□□ -0.52
VARS-217ENST00000440048 NDUFS5O43920 106 aa11.75□□□□□ -0.53
VARS-217ENST00000440048 UBL5Q9BZL1 73 aa11.74□□□□□ -0.53
VARS-217ENST00000440048 F8W1H4 67 aa11.73□□□□□ -0.53
VARS-217ENST00000440048 WFDC13Q8IUB5 93 aa11.72□□□□□ -0.53
VARS-217ENST00000440048 KRTAP9-8Q9BYQ0 159 aa11.7□□□□□ -0.54
VARS-217ENST00000440048 CASC2Q6XLA1 102 aa11.69□□□□□ -0.54
VARS-217ENST00000440048 ETDBQ3ZM63 59 aa11.68□□□□□ -0.54
VARS-217ENST00000440048 Q5W150 140 aa11.63□□□□□ -0.55
VARS-217ENST00000440048 HCG22E2RYF7 251 aa11.62□□□□□ -0.55
VARS-217ENST00000440048 IGKV2D-30A0A075B6S6 120 aa11.56□□□□□ -0.56
VARS-217ENST00000440048 IGKV2-30P06310 120 aa11.56□□□□□ -0.56
VARS-217ENST00000440048 MT2AP02795 61 aa11.55□□□□□ -0.56
VARS-217ENST00000440048 CXCL6P80162 114 aa11.53□□□□□ -0.56
VARS-217ENST00000440048 C7orf65Q6ZTY9 151 aa11.53□□□□□ -0.56
VARS-217ENST00000440048 MT1FP04733 61 aa11.46□□□□□ -0.57
VARS-217ENST00000440048 H1FX-AS1Q4G0G2 97 aa11.43□□□□□ -0.58
VARS-217ENST00000440048 ACYP1P07311 99 aa11.4□□□□□ -0.58
VARS-217ENST00000440048 KRTAP10-10P60014 251 aa11.4□□□□□ -0.58
VARS-217ENST00000440048 USH2AO75445 5202 aa11.36□□□□□ -0.59
VARS-217ENST00000440048 FAM240AA0A1B0GVK7 77 aa11.35□□□□□ -0.59
VARS-217ENST00000440048 C4orf26Q17RF5 130 aa11.35□□□□□ -0.59
VARS-217ENST00000440048 TP53AIP1Q9HCN2 124 aa11.35□□□□□ -0.59
VARS-217ENST00000440048 KRTAP9-3Q9BYQ3 159 aa11.32□□□□□ -0.6
VARS-217ENST00000440048 A0A1B0GV90 55 aa11.27□□□□□ -0.61
VARS-217ENST00000440048 ATP5EP2Q5VTU8 51 aa11.26□□□□□ -0.61
VARS-217ENST00000440048 LCE2BO14633 110 aa11.24□□□□□ -0.61
VARS-217ENST00000440048 SSPOA2VEC9 5147 aa11.23□□□□□ -0.61
VARS-217ENST00000440048 HIST1H4AP62805 103 aaKnown RBP11.19□□□□□ -0.62
VARS-217ENST00000440048 KRTAP3-1Q9BYR8 98 aa11.19□□□□□ -0.62
VARS-217ENST00000440048 C1orf64Q8NEQ6 169 aa11.15□□□□□ -0.62
VARS-217ENST00000440048 LINC00643Q86TS7 51 aa11.14□□□□□ -0.63
VARS-217ENST00000440048 TRAV22A0A0B4J277 110 aa11.12□□□□□ -0.63
VARS-217ENST00000440048 CYP4F30PQ9H0H9 118 aa11.12□□□□□ -0.63
VARS-217ENST00000440048 A0A087WVE0 104 aa11.07□□□□□ -0.64
VARS-217ENST00000440048 S4R3F8 94 aa11.07□□□□□ -0.64
VARS-217ENST00000440048 C5orf47Q569G3 176 aa11.06□□□□□ -0.64
VARS-217ENST00000440048 LOC101927531A0A1B0GV80 90 aa11.05□□□□□ -0.64
VARS-217ENST00000440048 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.05□□□□□ -0.64
VARS-217ENST00000440048 UQCRQO14949 82 aa11.05□□□□□ -0.64
VARS-217ENST00000440048 FCGBPQ9Y6R7 5405 aaPredicted RBP11.03□□□□□ -0.64
VARS-217ENST00000440048 KRTAP19-1Q8IUB9 90 aa11.02□□□□□ -0.65
VARS-217ENST00000440048 LCA10Q71F78 164 aa11□□□□□ -0.65
VARS-217ENST00000440048 H0Y9P7 68 aa10.99□□□□□ -0.65
VARS-217ENST00000440048 ATOX1O00244 68 aa10.96□□□□□ -0.65
VARS-217ENST00000440048 CSAG1Q6PB30 78 aa10.96□□□□□ -0.65
VARS-217ENST00000440048 KRTAP9-7A8MTY7 169 aa10.95□□□□□ -0.66
VARS-217ENST00000440048 J3QR89 54 aa10.94□□□□□ -0.66
VARS-217ENST00000440048 KRTAP3-3Q9BYR6 98 aa10.87□□□□□ -0.67
VARS-217ENST00000440048 FAM236AA0A1B0GUQ0 79 aa10.86□□□□□ -0.67
VARS-217ENST00000440048 FAM236BA0A1B0GV22 79 aa10.86□□□□□ -0.67
VARS-217ENST00000440048 OCR1Q9BZK8 76 aa10.86□□□□□ -0.67
VARS-217ENST00000440048 KRTAP19-6Q3LI70 58 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 182.5 ms