RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 NDUFB1O75438 58 aa7.06□□□□□ -1.28
SCLT1-202ENST00000439369 TPRXLQ17RH7 258 aa7.06□□□□□ -1.28
SCLT1-202ENST00000439369 A8MWP4 228 aa7.05□□□□□ -1.28
SCLT1-202ENST00000439369 CXCL6P80162 114 aa7.05□□□□□ -1.28
SCLT1-202ENST00000439369 DEFB116Q30KQ4 102 aa7.05□□□□□ -1.28
SCLT1-202ENST00000439369 ATP5EP2Q5VTU8 51 aa7.05□□□□□ -1.28
SCLT1-202ENST00000439369 A0A1B0GVX0 72 aa7.03□□□□□ -1.28
SCLT1-202ENST00000439369 KRTAP13-3Q3SY46 172 aa7.03□□□□□ -1.28
SCLT1-202ENST00000439369 LINC00643Q86TS7 51 aa7.03□□□□□ -1.28
SCLT1-202ENST00000439369 C8orf87E5RJ46 101 aa7.02□□□□□ -1.29
SCLT1-202ENST00000439369 DSCR10P59022 87 aa7.02□□□□□ -1.29
SCLT1-202ENST00000439369 PRR15Q8IV56 129 aa7.01□□□□□ -1.29
SCLT1-202ENST00000439369 IGKV3D-7A0A0C4DH55 119 aa7□□□□□ -1.29
SCLT1-202ENST00000439369 IGHV6-1A0A0B4J1U7 121 aa6.98□□□□□ -1.29
SCLT1-202ENST00000439369 LINC00313P59037 77 aa6.98□□□□□ -1.29
SCLT1-202ENST00000439369 CDIP1Q9H305 208 aa6.98□□□□□ -1.29
SCLT1-202ENST00000439369 K7EQZ3 153 aa6.97□□□□□ -1.29
SCLT1-202ENST00000439369 C8orf17Q9NRJ1 99 aa6.95□□□□□ -1.3
SCLT1-202ENST00000439369 C9orf92A6NGG3 77 aa6.94□□□□□ -1.3
SCLT1-202ENST00000439369 XP32Q5T750 250 aa6.92□□□□□ -1.3
SCLT1-202ENST00000439369 Q8N9L7 120 aa6.92□□□□□ -1.3
SCLT1-202ENST00000439369 MMP24-AS1A0A0U1RRL7 71 aa6.91□□□□□ -1.3
SCLT1-202ENST00000439369 NOTCH2NLQ7Z3S9 236 aa6.91□□□□□ -1.3
SCLT1-202ENST00000439369 HERC1Q15751 4861 aa6.91□□□□□ -1.3
SCLT1-202ENST00000439369 KRTAP16-1A8MUX0 517 aa6.9□□□□□ -1.3
SCLT1-202ENST00000439369 TMEM254Q8TBM7 123 aa6.9□□□□□ -1.3
SCLT1-202ENST00000439369 Q75L30 129 aa6.89□□□□□ -1.31
SCLT1-202ENST00000439369 C20orf166-AS1Q96NR2 134 aa6.89□□□□□ -1.31
SCLT1-202ENST00000439369 hDV103S1A0JD37 113 aa6.88□□□□□ -1.31
SCLT1-202ENST00000439369 A8MUU9 505 aa6.88□□□□□ -1.31
SCLT1-202ENST00000439369 HCG22E2RYF7 251 aa6.88□□□□□ -1.31
SCLT1-202ENST00000439369 IMUPQ9GZP8 106 aa6.88□□□□□ -1.31
SCLT1-202ENST00000439369 HIST1H4AP62805 103 aaKnown RBP6.87□□□□□ -1.31
SCLT1-202ENST00000439369 CASC2Q6XLA1 102 aa6.87□□□□□ -1.31
SCLT1-202ENST00000439369 RPL37P61927 97 aaKnown RBP6.86□□□□□ -1.31
SCLT1-202ENST00000439369 Q8N9P0 234 aaPredicted RBP6.86□□□□□ -1.31
SCLT1-202ENST00000439369 MRPL34Q9BQ48 92 aaKnown RBP6.86□□□□□ -1.31
SCLT1-202ENST00000439369 HMCN2Q8NDA2 5059 aa6.85□□□□□ -1.31
SCLT1-202ENST00000439369 SEC61BP60468 96 aaKnown RBP6.83□□□□□ -1.32
SCLT1-202ENST00000439369 WFDC13Q8IUB5 93 aa6.83□□□□□ -1.32
SCLT1-202ENST00000439369 MT-ATP8P03928 68 aa6.82□□□□□ -1.32
SCLT1-202ENST00000439369 A0A087WVE0 104 aa6.79□□□□□ -1.32
SCLT1-202ENST00000439369 ATP11AUNQ6ZP68 121 aa6.79□□□□□ -1.32
SCLT1-202ENST00000439369 TP53AIP1Q9HCN2 124 aa6.77□□□□□ -1.33
SCLT1-202ENST00000439369 NDUFS5O43920 106 aa6.76□□□□□ -1.33
SCLT1-202ENST00000439369 ZCCHC13Q8WW36 166 aaKnown RBP6.75□□□□□ -1.33
SCLT1-202ENST00000439369 PCOTHQ58A44 107 aa6.73□□□□□ -1.33
SCLT1-202ENST00000439369 LPAP08519 4548 aa6.72□□□□□ -1.33
SCLT1-202ENST00000439369 UQCRQO14949 82 aa6.69□□□□□ -1.34
SCLT1-202ENST00000439369 SCGB1A1P11684 91 aa6.69□□□□□ -1.34
SCLT1-202ENST00000439369 LRP2P98164 4655 aa6.69□□□□□ -1.34
SCLT1-202ENST00000439369 FAM236AA0A1B0GUQ0 79 aa6.68□□□□□ -1.34
SCLT1-202ENST00000439369 FAM236BA0A1B0GV22 79 aa6.68□□□□□ -1.34
SCLT1-202ENST00000439369 SMIM20Q8N5G0 67 aa6.68□□□□□ -1.34
SCLT1-202ENST00000439369 KRTAP4-8Q9BYQ9 185 aa6.67□□□□□ -1.34
SCLT1-202ENST00000439369 OCR1Q9BZK8 76 aa6.67□□□□□ -1.34
SCLT1-202ENST00000439369 Q5W150 140 aa6.65□□□□□ -1.34
SCLT1-202ENST00000439369 TRAV22A0A0B4J277 110 aa6.64□□□□□ -1.35
SCLT1-202ENST00000439369 ATOX1O00244 68 aa6.64□□□□□ -1.35
SCLT1-202ENST00000439369 TRAV7A0A075B6U4 112 aa6.6□□□□□ -1.35
SCLT1-202ENST00000439369 C5orf47Q569G3 176 aa6.6□□□□□ -1.35
SCLT1-202ENST00000439369 SPINK7P58062 85 aa6.59□□□□□ -1.35
SCLT1-202ENST00000439369 C7orf65Q6ZTY9 151 aa6.59□□□□□ -1.35
SCLT1-202ENST00000439369 KRTAP4-1Q9BYQ7 146 aa6.59□□□□□ -1.35
SCLT1-202ENST00000439369 H0Y9P7 68 aa6.58□□□□□ -1.36
SCLT1-202ENST00000439369 H3BPC8 53 aa6.58□□□□□ -1.36
SCLT1-202ENST00000439369 MUC17Q685J3 4493 aa6.58□□□□□ -1.36
SCLT1-202ENST00000439369 LOC101927531A0A1B0GV80 90 aa6.57□□□□□ -1.36
SCLT1-202ENST00000439369 IGKV2-30P06310 120 aa6.57□□□□□ -1.36
SCLT1-202ENST00000439369 MP68P56378 58 aa6.57□□□□□ -1.36
SCLT1-202ENST00000439369 UBR4Q5T4S7 5183 aa6.57□□□□□ -1.36
SCLT1-202ENST00000439369 IGKV2D-30A0A075B6S6 120 aa6.55□□□□□ -1.36
SCLT1-202ENST00000439369 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.55□□□□□ -1.36
SCLT1-202ENST00000439369 SERP2Q8N6R1 65 aa6.54□□□□□ -1.36
SCLT1-202ENST00000439369 KRTAP9-2Q9BYQ4 174 aa6.54□□□□□ -1.36
SCLT1-202ENST00000439369 C1orf64Q8NEQ6 169 aa6.52□□□□□ -1.37
SCLT1-202ENST00000439369 HRES1P13985 223 aa6.51□□□□□ -1.37
SCLT1-202ENST00000439369 LINC00208Q96KT6 92 aa6.51□□□□□ -1.37
SCLT1-202ENST00000439369 CYP4F30PQ9H0H9 118 aa6.51□□□□□ -1.37
SCLT1-202ENST00000439369 KRTAP9-6A0A140TA67 174 aa6.5□□□□□ -1.37
SCLT1-202ENST00000439369 MPLKIPQ8TAP9 179 aa6.5□□□□□ -1.37
SCLT1-202ENST00000439369 A0A0U1RQV1 116 aa6.49□□□□□ -1.37
SCLT1-202ENST00000439369 RBM12B-AS1Q9P1G2 102 aa6.48□□□□□ -1.37
SCLT1-202ENST00000439369 COX7CP15954 63 aa6.45□□□□□ -1.38
SCLT1-202ENST00000439369 RNF213Q63HN8 5207 aa6.45□□□□□ -1.38
SCLT1-202ENST00000439369 ANAPC13Q9BS18 74 aa6.44□□□□□ -1.38
SCLT1-202ENST00000439369 KRTAP19-2Q3LHN2 52 aa6.42□□□□□ -1.38
SCLT1-202ENST00000439369 C20orf197Q8N268 126 aa6.41□□□□□ -1.38
SCLT1-202ENST00000439369 KLKP1Q107X0 134 aa6.4□□□□□ -1.38
SCLT1-202ENST00000439369 COX6B2Q6YFQ2 88 aa6.4□□□□□ -1.38
SCLT1-202ENST00000439369 FAM236DA0A1B0GTK5 79 aa6.39□□□□□ -1.39
SCLT1-202ENST00000439369 FAM236CP0DP71 79 aa6.39□□□□□ -1.39
SCLT1-202ENST00000439369 C4orf26Q17RF5 130 aa6.39□□□□□ -1.39
SCLT1-202ENST00000439369 MUC2Q02817 5179 aa6.37□□□□□ -1.39
SCLT1-202ENST00000439369 LCE3BQ5TA77 95 aa6.36□□□□□ -1.39
SCLT1-202ENST00000439369 SNURFQ9Y675 71 aa6.36□□□□□ -1.39
SCLT1-202ENST00000439369 A8MUN3 132 aa6.34□□□□□ -1.39
SCLT1-202ENST00000439369 NDUFC1O43677 76 aa6.34□□□□□ -1.39
SCLT1-202ENST00000439369 H1FX-AS1Q4G0G2 97 aa6.33□□□□□ -1.4
SCLT1-202ENST00000439369 SPANXA2-OT1Q8N9U9 137 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms