RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 NOTCH2NLQ7Z3S9 236 aa7.15□□□□□ -1.27
HDAC8-214ENST00000439122 SPANXA2-OT1Q8N9U9 137 aa7.15□□□□□ -1.27
HDAC8-214ENST00000439122 PKD1P98161 4303 aa7.14□□□□□ -1.27
HDAC8-214ENST00000439122 MRPL34Q9BQ48 92 aaKnown RBP7.13□□□□□ -1.27
HDAC8-214ENST00000439122 HYDINQ4G0P3 5121 aa7.13□□□□□ -1.27
HDAC8-214ENST00000439122 FAT2Q9NYQ8 4349 aa7.12□□□□□ -1.27
HDAC8-214ENST00000439122 KRTAP10-1P60331 282 aa7.12□□□□□ -1.27
HDAC8-214ENST00000439122 SSBP3-AS1Q7Z2R9 100 aa7.12□□□□□ -1.27
HDAC8-214ENST00000439122 CD164Q04900 197 aa7.11□□□□□ -1.27
HDAC8-214ENST00000439122 PCOTHQ58A44 107 aa7.11□□□□□ -1.27
HDAC8-214ENST00000439122 LRP1BQ9NZR2 4599 aa7.1□□□□□ -1.27
HDAC8-214ENST00000439122 Q6ZSA8 131 aa7.1□□□□□ -1.27
HDAC8-214ENST00000439122 Q1T7F1 81 aa7.08□□□□□ -1.28
HDAC8-214ENST00000439122 VPS13BQ7Z7G8 4022 aa7.08□□□□□ -1.28
HDAC8-214ENST00000439122 IGLV7-46A0A075B6I9 117 aa7.06□□□□□ -1.28
HDAC8-214ENST00000439122 PRO0628Q9UI54 55 aa7.06□□□□□ -1.28
HDAC8-214ENST00000439122 BRK1Q8WUW1 75 aa7.06□□□□□ -1.28
HDAC8-214ENST00000439122 KRTAP13-2Q52LG2 175 aa7.05□□□□□ -1.28
HDAC8-214ENST00000439122 PSPHP1O15172 72 aa7.04□□□□□ -1.28
HDAC8-214ENST00000439122 C8orf87E5RJ46 101 aa7.01□□□□□ -1.29
HDAC8-214ENST00000439122 Q5W150 140 aa7.01□□□□□ -1.29
HDAC8-214ENST00000439122 COA5Q86WW8 74 aa7.01□□□□□ -1.29
HDAC8-214ENST00000439122 PKHD1P08F94 4074 aa7.01□□□□□ -1.29
HDAC8-214ENST00000439122 LINC00313P59037 77 aa7□□□□□ -1.29
HDAC8-214ENST00000439122 V9GYY9 64 aa7□□□□□ -1.29
HDAC8-214ENST00000439122 KRTAP1-4P0C5Y4 121 aa6.99□□□□□ -1.29
HDAC8-214ENST00000439122 C1orf195Q5TG92 126 aa6.99□□□□□ -1.29
HDAC8-214ENST00000439122 LOC101927531A0A1B0GV80 90 aa6.99□□□□□ -1.29
HDAC8-214ENST00000439122 A8MUN3 132 aa6.97□□□□□ -1.29
HDAC8-214ENST00000439122 Q8N9P0 234 aaPredicted RBP6.97□□□□□ -1.29
HDAC8-214ENST00000439122 KRTAP13-3Q3SY46 172 aa6.96□□□□□ -1.29
HDAC8-214ENST00000439122 PLA2G1BP04054 148 aaKnown RBP6.96□□□□□ -1.3
HDAC8-214ENST00000439122 LIMD2Q9BT23 127 aa6.94□□□□□ -1.3
HDAC8-214ENST00000439122 C4orf48Q5BLP8 95 aa6.93□□□□□ -1.3
HDAC8-214ENST00000439122 RETNLBQ9BQ08 111 aa6.93□□□□□ -1.3
HDAC8-214ENST00000439122 TYMSOSQ8TAI1 123 aa6.93□□□□□ -1.3
HDAC8-214ENST00000439122 SACSQ9NZJ4 4579 aa6.92□□□□□ -1.3
HDAC8-214ENST00000439122 HRES1P13985 223 aa6.92□□□□□ -1.3
HDAC8-214ENST00000439122 Q5VV11 94 aa6.91□□□□□ -1.3
HDAC8-214ENST00000439122 PRR15LQ9BU68 103 aa6.91□□□□□ -1.3
HDAC8-214ENST00000439122 FAM229AH3BQW9 127 aa6.9□□□□□ -1.3
HDAC8-214ENST00000439122 SPAG11AQ6PDA7 123 aa6.88□□□□□ -1.31
HDAC8-214ENST00000439122 KRTAP16-1A8MUX0 517 aa6.88□□□□□ -1.31
HDAC8-214ENST00000439122 CHKB-CPT1BH3BT56 60 aa6.87□□□□□ -1.31
HDAC8-214ENST00000439122 SPINK1P00995 79 aa6.87□□□□□ -1.31
HDAC8-214ENST00000439122 SMR3BP02814 79 aaPredicted RBP6.85□□□□□ -1.31
HDAC8-214ENST00000439122 PRR26Q8N8Z3 221 aa6.84□□□□□ -1.31
HDAC8-214ENST00000439122 IGKV2-30P06310 120 aa6.83□□□□□ -1.32
HDAC8-214ENST00000439122 ACYP2P14621 99 aa6.83□□□□□ -1.32
HDAC8-214ENST00000439122 LINC00304Q8N9R0 145 aa6.82□□□□□ -1.32
HDAC8-214ENST00000439122 DYNC1H1Q14204 4646 aaKnown RBP6.82□□□□□ -1.32
HDAC8-214ENST00000439122 Q75L30 129 aa6.81□□□□□ -1.32
HDAC8-214ENST00000439122 LINC01558Q9Y6Z2 57 aa6.81□□□□□ -1.32
HDAC8-214ENST00000439122 IGKV2D-30A0A075B6S6 120 aa6.79□□□□□ -1.32
HDAC8-214ENST00000439122 A8MU10 97 aa6.79□□□□□ -1.32
HDAC8-214ENST00000439122 DMAC1Q96GE9 116 aa6.79□□□□□ -1.32
HDAC8-214ENST00000439122 A6NED7 52 aa6.78□□□□□ -1.32
HDAC8-214ENST00000439122 FAT1Q14517 4588 aa6.78□□□□□ -1.32
HDAC8-214ENST00000439122 SEC61GP60059 68 aa6.77□□□□□ -1.33
HDAC8-214ENST00000439122 A0A1B0GVY2 172 aa6.76□□□□□ -1.33
HDAC8-214ENST00000439122 RPS29P62273 56 aaKnown RBP6.76□□□□□ -1.33
HDAC8-214ENST00000439122 APOBP04114 4563 aaKnown RBP6.75□□□□□ -1.33
HDAC8-214ENST00000439122 LCA10Q71F78 164 aa6.72□□□□□ -1.33
HDAC8-214ENST00000439122 KRTAP10-4P60372 401 aaPredicted RBP6.7□□□□□ -1.34
HDAC8-214ENST00000439122 PKHD1L1Q86WI1 4243 aa6.7□□□□□ -1.34
HDAC8-214ENST00000439122 C7orf65Q6ZTY9 151 aa6.7□□□□□ -1.34
HDAC8-214ENST00000439122 SPINK7P58062 85 aa6.68□□□□□ -1.34
HDAC8-214ENST00000439122 SPTSSBQ8NFR3 76 aa6.68□□□□□ -1.34
HDAC8-214ENST00000439122 C9orf92A6NGG3 77 aa6.68□□□□□ -1.34
HDAC8-214ENST00000439122 KMT2CQ8NEZ4 4911 aaKnown RBP6.68□□□□□ -1.34
HDAC8-214ENST00000439122 CDC42SE1Q9NRR8 79 aa6.67□□□□□ -1.34
HDAC8-214ENST00000439122 RYR2Q92736 4967 aa6.67□□□□□ -1.34
HDAC8-214ENST00000439122 PMAIP1Q13794 54 aa6.66□□□□□ -1.34
HDAC8-214ENST00000439122 LCE2DQ5TA82 110 aaPredicted RBP6.65□□□□□ -1.35
HDAC8-214ENST00000439122 ATP11AUNQ6ZP68 121 aa6.64□□□□□ -1.35
HDAC8-214ENST00000439122 A0A1B0GU69 56 aa6.62□□□□□ -1.35
HDAC8-214ENST00000439122 Q8N1X5 172 aa6.62□□□□□ -1.35
HDAC8-214ENST00000439122 C20orf166-AS1Q96NR2 134 aa6.6□□□□□ -1.35
HDAC8-214ENST00000439122 A8MUU9 505 aa6.6□□□□□ -1.35
HDAC8-214ENST00000439122 FLG2Q5D862 2391 aaPredicted RBP6.56□□□□□ -1.36
HDAC8-214ENST00000439122 LRP1Q07954 4544 aaKnown RBP6.53□□□□□ -1.36
HDAC8-214ENST00000439122 TNXBP22105 4242 aa6.52□□□□□ -1.37
HDAC8-214ENST00000439122 A6NN06 94 aa6.51□□□□□ -1.37
HDAC8-214ENST00000439122 HSPG2P98160 4391 aa6.5□□□□□ -1.37
HDAC8-214ENST00000439122 Q5VSD8 79 aa6.49□□□□□ -1.37
HDAC8-214ENST00000439122 UQCR11O14957 56 aa6.48□□□□□ -1.37
HDAC8-214ENST00000439122 KTN1-AS1Q86SY8 53 aa6.47□□□□□ -1.37
HDAC8-214ENST00000439122 FAT3Q8TDW7 4589 aa6.47□□□□□ -1.37
HDAC8-214ENST00000439122 MIR22HGQ0VDD5 57 aa6.46□□□□□ -1.38
HDAC8-214ENST00000439122 SPATA8Q6RVD6 105 aa6.46□□□□□ -1.38
HDAC8-214ENST00000439122 KRTAP3-1Q9BYR8 98 aa6.46□□□□□ -1.38
HDAC8-214ENST00000439122 KRTAP10-8P60410 259 aa6.45□□□□□ -1.38
HDAC8-214ENST00000439122 DMBT1Q9UGM3 2413 aaPredicted RBP6.44□□□□□ -1.38
HDAC8-214ENST00000439122 RYR3Q15413 4870 aa6.44□□□□□ -1.38
HDAC8-214ENST00000439122 RYR1P21817 5038 aa6.37□□□□□ -1.39
HDAC8-214ENST00000439122 COX6B2Q6YFQ2 88 aa6.37□□□□□ -1.39
HDAC8-214ENST00000439122 RBM12B-AS1Q9P1G2 102 aa6.37□□□□□ -1.39
HDAC8-214ENST00000439122 MYCBP2O75592 4640 aa6.37□□□□□ -1.39
HDAC8-214ENST00000439122 KRTAP17-1Q9BYP8 105 aa6.35□□□□□ -1.39
HDAC8-214ENST00000439122 RPL37P61927 97 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms