RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 BVES-AS1Q5T3Y7 98 aa4.17□□□□□ -1.74
SMPD4-208ENST00000439029 PET117Q6UWS5 81 aa4.16□□□□□ -1.74
SMPD4-208ENST00000439029 ANKRD29Q8N6D5 301 aa4.16□□□□□ -1.74
SMPD4-208ENST00000439029 TRBV7-4A0A0J9YYF1 115 aa4.15□□□□□ -1.75
SMPD4-208ENST00000439029 SNAPINO95295 136 aa4.15□□□□□ -1.75
SMPD4-208ENST00000439029 ATOH7Q8N100 152 aa4.15□□□□□ -1.75
SMPD4-208ENST00000439029 LOC100996750A0A140TA64 210 aa4.13□□□□□ -1.75
SMPD4-208ENST00000439029 SVBPQ8N300 66 aa4.13□□□□□ -1.75
SMPD4-208ENST00000439029 DSCR8Q96T75 97 aa4.13□□□□□ -1.75
SMPD4-208ENST00000439029 KRTAP4-6Q9BYQ5 205 aa4.13□□□□□ -1.75
SMPD4-208ENST00000439029 KRTAP4-8A0A0G2JLE6 195 aa4.12□□□□□ -1.75
SMPD4-208ENST00000439029 TRACP01848 142 aa4.12□□□□□ -1.75
SMPD4-208ENST00000439029 KRTAP4-8Q9BYQ9 185 aa4.12□□□□□ -1.75
SMPD4-208ENST00000439029 CCKP06307 115 aa4.11□□□□□ -1.75
SMPD4-208ENST00000439029 KRTDAPP60985 99 aa4.11□□□□□ -1.75
SMPD4-208ENST00000439029 RBM3P98179 157 aaKnown RBP4.11□□□□□ -1.75
SMPD4-208ENST00000439029 KLKP1Q107X0 134 aa4.11□□□□□ -1.75
SMPD4-208ENST00000439029 IGKV2D-30A0A075B6S6 120 aa4.1□□□□□ -1.75
SMPD4-208ENST00000439029 SNCGO76070 127 aa4.1□□□□□ -1.75
SMPD4-208ENST00000439029 IGKV2-30P06310 120 aa4.1□□□□□ -1.75
SMPD4-208ENST00000439029 NDUFA5Q16718 116 aa4.09□□□□□ -1.75
SMPD4-208ENST00000439029 VPS25Q9BRG1 176 aa4.09□□□□□ -1.75
SMPD4-208ENST00000439029 C4orf26Q17RF5 130 aa4.08□□□□□ -1.76
SMPD4-208ENST00000439029 C8orf17Q9NRJ1 99 aa4.08□□□□□ -1.76
SMPD4-208ENST00000439029 MT1XP80297 61 aa4.07□□□□□ -1.76
SMPD4-208ENST00000439029 CSAG1Q6PB30 78 aa4.06□□□□□ -1.76
SMPD4-208ENST00000439029 LCA10Q71F78 164 aa4.06□□□□□ -1.76
SMPD4-208ENST00000439029 H0YGX0 51 aa4.05□□□□□ -1.76
SMPD4-208ENST00000439029 NDUFB1O75438 58 aa4.04□□□□□ -1.76
SMPD4-208ENST00000439029 Q6ZVQ6 151 aa4.04□□□□□ -1.76
SMPD4-208ENST00000439029 PRO2289Q9P1D8 64 aa4.04□□□□□ -1.76
SMPD4-208ENST00000439029 S4R3F8 94 aa4.04□□□□□ -1.76
SMPD4-208ENST00000439029 AHNAK2Q8IVF2 5795 aa4.04□□□□□ -1.76
SMPD4-208ENST00000439029 J3KT08 172 aa4.03□□□□□ -1.76
SMPD4-208ENST00000439029 HMCN1Q96RW7 5635 aa4.02□□□□□ -1.77
SMPD4-208ENST00000439029 KRTAP12-2P59991 146 aa4.01□□□□□ -1.77
SMPD4-208ENST00000439029 C2orf91Q6ZV80 131 aa4.01□□□□□ -1.77
SMPD4-208ENST00000439029 PRR15Q8IV56 129 aa4.01□□□□□ -1.77
SMPD4-208ENST00000439029 HIST1H4GQ99525 98 aa4.01□□□□□ -1.77
SMPD4-208ENST00000439029 NDUFS5O43920 106 aa4□□□□□ -1.77
SMPD4-208ENST00000439029 HIST1H2BKO60814 126 aa4□□□□□ -1.77
SMPD4-208ENST00000439029 HIST1H2BJP06899 126 aa4□□□□□ -1.77
SMPD4-208ENST00000439029 HIST1H2BOP23527 126 aa4□□□□□ -1.77
SMPD4-208ENST00000439029 HIST1H2BBP33778 126 aa4□□□□□ -1.77
SMPD4-208ENST00000439029 HIST1H2BDP58876 126 aa4□□□□□ -1.77
SMPD4-208ENST00000439029 HIST1H2BCP62807 126 aa4□□□□□ -1.77
SMPD4-208ENST00000439029 HIST2H2BEQ16778 126 aa4□□□□□ -1.77
SMPD4-208ENST00000439029 HIST2H2BFQ5QNW6 126 aaPredicted RBP4□□□□□ -1.77
SMPD4-208ENST00000439029 C7orf65Q6ZTY9 151 aa4□□□□□ -1.77
SMPD4-208ENST00000439029 HIST1H2BHQ93079 126 aa4□□□□□ -1.77
SMPD4-208ENST00000439029 HIST1H2BNQ99877 126 aa4□□□□□ -1.77
SMPD4-208ENST00000439029 HIST1H2BMQ99879 126 aa4□□□□□ -1.77
SMPD4-208ENST00000439029 KRTAP3-1Q9BYR8 98 aa4□□□□□ -1.77
SMPD4-208ENST00000439029 LCE1DQ5T752 114 aa3.98□□□□□ -1.77
SMPD4-208ENST00000439029 Q5W150 140 aa3.98□□□□□ -1.77
SMPD4-208ENST00000439029 ORMDL1Q9P0S3 153 aa3.98□□□□□ -1.77
SMPD4-208ENST00000439029 A0A1B0GX51 115 aa3.97□□□□□ -1.77
SMPD4-208ENST00000439029 MRPL34Q9BQ48 92 aaKnown RBP3.97□□□□□ -1.77
SMPD4-208ENST00000439029 C9orf118A6NHY6 69 aa3.96□□□□□ -1.78
SMPD4-208ENST00000439029 CRIPTQ9P021 101 aa3.96□□□□□ -1.78
SMPD4-208ENST00000439029 SVIPQ8NHG7 77 aa3.95□□□□□ -1.78
SMPD4-208ENST00000439029 TMEM254Q8TBM7 123 aa3.95□□□□□ -1.78
SMPD4-208ENST00000439029 DNAL4O96015 105 aa3.94□□□□□ -1.78
SMPD4-208ENST00000439029 KRTAP5-10Q6L8G5 202 aa3.94□□□□□ -1.78
SMPD4-208ENST00000439029 Q6ZQT0 140 aa3.94□□□□□ -1.78
SMPD4-208ENST00000439029 MMP24-AS1A0A0U1RRL7 71 aa3.93□□□□□ -1.78
SMPD4-208ENST00000439029 K7EQZ3 153 aa3.92□□□□□ -1.78
SMPD4-208ENST00000439029 TMEM256-PLSCR3K7ERE1 68 aa3.92□□□□□ -1.78
SMPD4-208ENST00000439029 TRIAP1O43715 76 aa3.92□□□□□ -1.78
SMPD4-208ENST00000439029 S100A1P23297 94 aa3.92□□□□□ -1.78
SMPD4-208ENST00000439029 SNRPEP62304 92 aaKnown RBP3.92□□□□□ -1.78
SMPD4-208ENST00000439029 A0A0B4J2C4 111 aa3.91□□□□□ -1.78
SMPD4-208ENST00000439029 MT4P47944 62 aa3.91□□□□□ -1.78
SMPD4-208ENST00000439029 KRTAP10-7P60409 375 aaPredicted RBP3.91□□□□□ -1.78
SMPD4-208ENST00000439029 C1orf64Q8NEQ6 169 aa3.91□□□□□ -1.78
SMPD4-208ENST00000439029 LOC105371267A0A1B0GV96 52 aa3.9□□□□□ -1.79
SMPD4-208ENST00000439029 KRTAP19-4Q3LI73 84 aa3.9□□□□□ -1.79
SMPD4-208ENST00000439029 PLAC4Q8WY50 150 aa3.9□□□□□ -1.79
SMPD4-208ENST00000439029 hDV103S1A0JD37 113 aa3.89□□□□□ -1.79
SMPD4-208ENST00000439029 HSBP1L1C9JCN9 74 aa3.89□□□□□ -1.79
SMPD4-208ENST00000439029 H3BQ85 93 aa3.88□□□□□ -1.79
SMPD4-208ENST00000439029 UBE2V1Q13404 147 aa3.88□□□□□ -1.79
SMPD4-208ENST00000439029 KRTAP4-12Q9BQ66 201 aa3.88□□□□□ -1.79
SMPD4-208ENST00000439029 S100A6P06703 90 aa3.87□□□□□ -1.79
SMPD4-208ENST00000439029 PRO1854Q9UHT4 67 aa3.87□□□□□ -1.79
SMPD4-208ENST00000439029 A8MUN3 132 aa3.86□□□□□ -1.79
SMPD4-208ENST00000439029 C9JAW5 83 aa3.86□□□□□ -1.79
SMPD4-208ENST00000439029 CEND1Q8N111 149 aa3.86□□□□□ -1.79
SMPD4-208ENST00000439029 COA6Q5JTJ3 125 aaKnown RBP3.85□□□□□ -1.79
SMPD4-208ENST00000439029 SPRR5A0A1B0GTR4 108 aa3.84□□□□□ -1.79
SMPD4-208ENST00000439029 KRTAP5-7Q6L8G8 165 aa3.84□□□□□ -1.79
SMPD4-208ENST00000439029 A0A087WVE0 104 aa3.83□□□□□ -1.8
SMPD4-208ENST00000439029 PDE6GP18545 87 aa3.83□□□□□ -1.8
SMPD4-208ENST00000439029 PSMB2P49721 201 aa3.83□□□□□ -1.8
SMPD4-208ENST00000439029 COX8AP10176 69 aa3.82□□□□□ -1.8
SMPD4-208ENST00000439029 KRTAP10-12P60413 245 aa3.82□□□□□ -1.8
SMPD4-208ENST00000439029 HCG22E2RYF7 251 aa3.81□□□□□ -1.8
SMPD4-208ENST00000439029 FXYD2P54710 66 aa3.79□□□□□ -1.8
SMPD4-208ENST00000439029 C14orf144Q96I85 54 aa3.79□□□□□ -1.8
SMPD4-208ENST00000439029 K7ERJ3 54 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms