RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 A0A1B0GX51 115 aa9.06□□□□□ -0.96
GTF3A-204ENST00000438571 SCGB1C2P0DMR2 95 aa9.06□□□□□ -0.96
GTF3A-204ENST00000438571 LINC00313P59037 77 aa9.06□□□□□ -0.96
GTF3A-204ENST00000438571 DEFB116Q30KQ4 102 aa9.06□□□□□ -0.96
GTF3A-204ENST00000438571 MPLKIPQ8TAP9 179 aa9.06□□□□□ -0.96
GTF3A-204ENST00000438571 COX6CP09669 75 aa9.03□□□□□ -0.96
GTF3A-204ENST00000438571 A0A1W2PPM0 123 aa9.01□□□□□ -0.97
GTF3A-204ENST00000438571 ANKRD29Q8N6D5 301 aa9.01□□□□□ -0.97
GTF3A-204ENST00000438571 TRBV7-4A0A0J9YYF1 115 aa9□□□□□ -0.97
GTF3A-204ENST00000438571 KRTAP19-1Q8IUB9 90 aa8.99□□□□□ -0.97
GTF3A-204ENST00000438571 KRTAP9-3Q9BYQ3 159 aa8.99□□□□□ -0.97
GTF3A-204ENST00000438571 LINC00472Q9H8W2 130 aa8.99□□□□□ -0.97
GTF3A-204ENST00000438571 GHRHP01286 108 aa8.98□□□□□ -0.97
GTF3A-204ENST00000438571 IGHV6-1A0A0B4J1U7 121 aa8.97□□□□□ -0.97
GTF3A-204ENST00000438571 ORMDL1Q9P0S3 153 aa8.97□□□□□ -0.97
GTF3A-204ENST00000438571 RBM12B-AS1Q9P1G2 102 aa8.97□□□□□ -0.97
GTF3A-204ENST00000438571 DNAL4O96015 105 aa8.95□□□□□ -0.98
GTF3A-204ENST00000438571 KRTAP10-10P60014 251 aa8.95□□□□□ -0.98
GTF3A-204ENST00000438571 CCKP06307 115 aa8.94□□□□□ -0.98
GTF3A-204ENST00000438571 ATXN8Q156A1 80 aa8.94□□□□□ -0.98
GTF3A-204ENST00000438571 LYRM7Q5U5X0 104 aa8.94□□□□□ -0.98
GTF3A-204ENST00000438571 TRACP01848 142 aa8.93□□□□□ -0.98
GTF3A-204ENST00000438571 SPCS1Q9Y6A9 102 aa8.93□□□□□ -0.98
GTF3A-204ENST00000438571 A0A1B0GVX0 72 aa8.88□□□□□ -0.99
GTF3A-204ENST00000438571 K7EP34 96 aa8.88□□□□□ -0.99
GTF3A-204ENST00000438571 TMEM256-PLSCR3K7ERE1 68 aa8.88□□□□□ -0.99
GTF3A-204ENST00000438571 MTURNQ8N3F0 131 aa8.88□□□□□ -0.99
GTF3A-204ENST00000438571 C9JAW5 83 aa8.87□□□□□ -0.99
GTF3A-204ENST00000438571 VPS25Q9BRG1 176 aa8.87□□□□□ -0.99
GTF3A-204ENST00000438571 A0A1B0GV90 55 aa8.86□□□□□ -0.99
GTF3A-204ENST00000438571 BAALC-AS2P0C853 105 aa8.86□□□□□ -0.99
GTF3A-204ENST00000438571 MACF1Q9UPN3 7388 aaKnown RBP8.86□□□□□ -0.99
GTF3A-204ENST00000438571 C8orf87E5RJ46 101 aa8.84□□□□□ -0.99
GTF3A-204ENST00000438571 H3BQ85 93 aa8.84□□□□□ -0.99
GTF3A-204ENST00000438571 UBE2V1Q13404 147 aa8.84□□□□□ -0.99
GTF3A-204ENST00000438571 ZCCHC13Q8WW36 166 aaKnown RBP8.84□□□□□ -0.99
GTF3A-204ENST00000438571 KRTAP4-8Q9BYQ9 185 aa8.84□□□□□ -0.99
GTF3A-204ENST00000438571 SPINK7P58062 85 aa8.81□□□□□ -1
GTF3A-204ENST00000438571 GTF2H5Q6ZYL4 71 aa8.81□□□□□ -1
GTF3A-204ENST00000438571 SYNE2Q8WXH0 6885 aaKnown RBP8.8□□□□□ -1
GTF3A-204ENST00000438571 PRO0461Q9UI25 63 aa8.8□□□□□ -1
GTF3A-204ENST00000438571 RBM3P98179 157 aaKnown RBP8.77□□□□□ -1.01
GTF3A-204ENST00000438571 H3BT86 120 aa8.76□□□□□ -1.01
GTF3A-204ENST00000438571 Q8N9P0 234 aaPredicted RBP8.74□□□□□ -1.01
GTF3A-204ENST00000438571 DSCR8Q96T75 97 aa8.74□□□□□ -1.01
GTF3A-204ENST00000438571 WFDC13Q8IUB5 93 aa8.73□□□□□ -1.01
GTF3A-204ENST00000438571 KRTAP19-6Q3LI70 58 aa8.72□□□□□ -1.01
GTF3A-204ENST00000438571 Q6ZQT0 140 aa8.72□□□□□ -1.01
GTF3A-204ENST00000438571 J3KT08 172 aa8.71□□□□□ -1.02
GTF3A-204ENST00000438571 F8W1H4 67 aa8.69□□□□□ -1.02
GTF3A-204ENST00000438571 C8orf17Q9NRJ1 99 aa8.69□□□□□ -1.02
GTF3A-204ENST00000438571 A8MWP4 228 aa8.66□□□□□ -1.02
GTF3A-204ENST00000438571 JMJD7-PLA2G4BH0Y9G9 81 aa8.66□□□□□ -1.02
GTF3A-204ENST00000438571 C14orf132Q9NPU4 83 aa8.66□□□□□ -1.02
GTF3A-204ENST00000438571 IGKV3D-7A0A0C4DH55 119 aa8.65□□□□□ -1.02
GTF3A-204ENST00000438571 NDUFB1O75438 58 aa8.64□□□□□ -1.03
GTF3A-204ENST00000438571 ETDBQ3ZM63 59 aa8.64□□□□□ -1.03
GTF3A-204ENST00000438571 LOC110117498A0A087WWA1 95 aa8.6□□□□□ -1.03
GTF3A-204ENST00000438571 C21orf62-AS1Q17RA5 79 aa8.6□□□□□ -1.03
GTF3A-204ENST00000438571 Q6ZVQ6 151 aa8.59□□□□□ -1.03
GTF3A-204ENST00000438571 LINC00846Q9NV44 126 aa8.58□□□□□ -1.04
GTF3A-204ENST00000438571 MMP24-AS1A0A0U1RRL7 71 aa8.55□□□□□ -1.04
GTF3A-204ENST00000438571 PDE6GP18545 87 aa8.54□□□□□ -1.04
GTF3A-204ENST00000438571 PRR15Q8IV56 129 aa8.54□□□□□ -1.04
GTF3A-204ENST00000438571 MRPL34Q9BQ48 92 aaKnown RBP8.51□□□□□ -1.05
GTF3A-204ENST00000438571 H1FX-AS1Q4G0G2 97 aa8.5□□□□□ -1.05
GTF3A-204ENST00000438571 TMEM254Q8TBM7 123 aa8.5□□□□□ -1.05
GTF3A-204ENST00000438571 A0A1B0GW54 56 aa8.49□□□□□ -1.05
GTF3A-204ENST00000438571 KRTAP4-12Q9BQ66 201 aa8.47□□□□□ -1.05
GTF3A-204ENST00000438571 K7EQZ3 153 aa8.46□□□□□ -1.06
GTF3A-204ENST00000438571 NREPQ16612 68 aa8.46□□□□□ -1.06
GTF3A-204ENST00000438571 KRTAP6-3Q3LI67 103 aa8.45□□□□□ -1.06
GTF3A-204ENST00000438571 NDUFS5O43920 106 aa8.44□□□□□ -1.06
GTF3A-204ENST00000438571 hDV103S1A0JD37 113 aa8.43□□□□□ -1.06
GTF3A-204ENST00000438571 IGKV2D-30A0A075B6S6 120 aa8.42□□□□□ -1.06
GTF3A-204ENST00000438571 IGKV2-30P06310 120 aa8.42□□□□□ -1.06
GTF3A-204ENST00000438571 Q5W150 140 aa8.42□□□□□ -1.06
GTF3A-204ENST00000438571 LCE3BQ5TA77 95 aa8.41□□□□□ -1.06
GTF3A-204ENST00000438571 C7orf65Q6ZTY9 151 aa8.37□□□□□ -1.07
GTF3A-204ENST00000438571 FAM240AA0A1B0GVK7 77 aa8.32□□□□□ -1.08
GTF3A-204ENST00000438571 ACYP1P07311 99 aa8.32□□□□□ -1.08
GTF3A-204ENST00000438571 C4orf26Q17RF5 130 aa8.32□□□□□ -1.08
GTF3A-204ENST00000438571 Q8N9L7 120 aa8.32□□□□□ -1.08
GTF3A-204ENST00000438571 UBL5Q9BZL1 73 aa8.32□□□□□ -1.08
GTF3A-204ENST00000438571 MUC12Q9UKN1 5478 aa8.31□□□□□ -1.08
GTF3A-204ENST00000438571 J3QR89 54 aa8.29□□□□□ -1.08
GTF3A-204ENST00000438571 BPY2O14599 106 aa8.29□□□□□ -1.08
GTF3A-204ENST00000438571 NEBP20929 6669 aa8.29□□□□□ -1.08
GTF3A-204ENST00000438571 HCG22E2RYF7 251 aa8.28□□□□□ -1.08
GTF3A-204ENST00000438571 C5orf47Q569G3 176 aa8.27□□□□□ -1.09
GTF3A-204ENST00000438571 MT1BP07438 61 aa8.26□□□□□ -1.09
GTF3A-204ENST00000438571 KRTAP9-9Q9BYP9 154 aa8.26□□□□□ -1.09
GTF3A-204ENST00000438571 KRTAP9-4Q9BYQ2 154 aa8.26□□□□□ -1.09
GTF3A-204ENST00000438571 CASC2Q6XLA1 102 aa8.25□□□□□ -1.09
GTF3A-204ENST00000438571 K7ERU9 68 aa8.23□□□□□ -1.09
GTF3A-204ENST00000438571 KRTAP3-1Q9BYR8 98 aa8.23□□□□□ -1.09
GTF3A-204ENST00000438571 FAM236AA0A1B0GUQ0 79 aa8.2□□□□□ -1.1
GTF3A-204ENST00000438571 FAM236BA0A1B0GV22 79 aa8.2□□□□□ -1.1
GTF3A-204ENST00000438571 A6NN06 94 aa8.2□□□□□ -1.1
GTF3A-204ENST00000438571 LINC00643Q86TS7 51 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms