RNA–Protein interactions for RNA: ENST00000438180.1

GSE1-206, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 1 (best)

Gene GSE1, Length 1,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-206ENST00000438180 C8orf17Q9NRJ1 99 aa9.68□□□□□ -0.86
GSE1-206ENST00000438180 RYR3Q15413 4870 aa9.68□□□□□ -0.86
GSE1-206ENST00000438180 KLKP1Q107X0 134 aa9.65□□□□□ -0.87
GSE1-206ENST00000438180 C1orf195Q5TG92 126 aa9.65□□□□□ -0.87
GSE1-206ENST00000438180 C8orf87E5RJ46 101 aa9.64□□□□□ -0.87
GSE1-206ENST00000438180 Q5VSD8 79 aa9.64□□□□□ -0.87
GSE1-206ENST00000438180 TMEM254Q8TBM7 123 aa9.63□□□□□ -0.87
GSE1-206ENST00000438180 C5orf47Q569G3 176 aa9.62□□□□□ -0.87
GSE1-206ENST00000438180 FAT1Q14517 4588 aa9.62□□□□□ -0.87
GSE1-206ENST00000438180 NDUFC1O43677 76 aa9.59□□□□□ -0.87
GSE1-206ENST00000438180 TP53AIP1Q9HCN2 124 aa9.59□□□□□ -0.87
GSE1-206ENST00000438180 MRPL34Q9BQ48 92 aaKnown RBP9.58□□□□□ -0.88
GSE1-206ENST00000438180 SNURFQ9Y675 71 aa9.57□□□□□ -0.88
GSE1-206ENST00000438180 MP68P56378 58 aa9.56□□□□□ -0.88
GSE1-206ENST00000438180 TMEM258P61165 79 aa9.56□□□□□ -0.88
GSE1-206ENST00000438180 A0A0U1RQV1 116 aa9.56□□□□□ -0.88
GSE1-206ENST00000438180 CYSTM1Q9H1C7 97 aa9.56□□□□□ -0.88
GSE1-206ENST00000438180 PKHD1L1Q86WI1 4243 aa9.56□□□□□ -0.88
GSE1-206ENST00000438180 LINC00313P59037 77 aa9.54□□□□□ -0.88
GSE1-206ENST00000438180 HSPG2P98160 4391 aa9.53□□□□□ -0.88
GSE1-206ENST00000438180 H3BPC8 53 aa9.53□□□□□ -0.88
GSE1-206ENST00000438180 NDUFS5O43920 106 aa9.53□□□□□ -0.88
GSE1-206ENST00000438180 NOTCH2NLQ7Z3S9 236 aa9.52□□□□□ -0.89
GSE1-206ENST00000438180 TRAV22A0A0B4J277 110 aa9.5□□□□□ -0.89
GSE1-206ENST00000438180 H0Y9P7 68 aa9.5□□□□□ -0.89
GSE1-206ENST00000438180 H7BZZ5 65 aa9.5□□□□□ -0.89
GSE1-206ENST00000438180 Q8N1X5 172 aa9.5□□□□□ -0.89
GSE1-206ENST00000438180 RYR1P21817 5038 aa9.48□□□□□ -0.89
GSE1-206ENST00000438180 ZCCHC13Q8WW36 166 aaKnown RBP9.46□□□□□ -0.89
GSE1-206ENST00000438180 LINC00208Q96KT6 92 aa9.45□□□□□ -0.9
GSE1-206ENST00000438180 KRTAP10-8P60410 259 aa9.43□□□□□ -0.9
GSE1-206ENST00000438180 ATP5EP56381 51 aaPredicted RBP9.42□□□□□ -0.9
GSE1-206ENST00000438180 FAM236DA0A1B0GTK5 79 aa9.42□□□□□ -0.9
GSE1-206ENST00000438180 FAM236CP0DP71 79 aa9.42□□□□□ -0.9
GSE1-206ENST00000438180 Q8N9P0 234 aaPredicted RBP9.42□□□□□ -0.9
GSE1-206ENST00000438180 C1orf64Q8NEQ6 169 aa9.41□□□□□ -0.9
GSE1-206ENST00000438180 KRTAP16-1A8MUX0 517 aa9.39□□□□□ -0.91
GSE1-206ENST00000438180 KRTAP17-1Q9BYP8 105 aa9.34□□□□□ -0.91
GSE1-206ENST00000438180 KIAA1109Q2LD37 5005 aa9.34□□□□□ -0.91
GSE1-206ENST00000438180 LOC101927531A0A1B0GV80 90 aa9.32□□□□□ -0.92
GSE1-206ENST00000438180 RPS28P62857 69 aaKnown RBP9.32□□□□□ -0.92
GSE1-206ENST00000438180 EPPK1P58107 5090 aaKnown RBP9.32□□□□□ -0.92
GSE1-206ENST00000438180 FLG2Q5D862 2391 aaPredicted RBP9.31□□□□□ -0.92
GSE1-206ENST00000438180 KRTAP13-3Q3SY46 172 aa9.3□□□□□ -0.92
GSE1-206ENST00000438180 RETNLBQ9BQ08 111 aa9.29□□□□□ -0.92
GSE1-206ENST00000438180 OXTP01178 125 aa9.28□□□□□ -0.92
GSE1-206ENST00000438180 Q5W150 140 aa9.28□□□□□ -0.92
GSE1-206ENST00000438180 FP248Q71RG6 208 aaPredicted RBP9.28□□□□□ -0.92
GSE1-206ENST00000438180 TNXBP22105 4242 aa9.28□□□□□ -0.92
GSE1-206ENST00000438180 SPANXA2-OT1Q8N9U9 137 aa9.28□□□□□ -0.92
GSE1-206ENST00000438180 SERP1Q9Y6X1 66 aa9.26□□□□□ -0.93
GSE1-206ENST00000438180 LRP1Q07954 4544 aaKnown RBP9.24□□□□□ -0.93
GSE1-206ENST00000438180 MT1HL1P0DM35 61 aa9.24□□□□□ -0.93
GSE1-206ENST00000438180 FAT3Q8TDW7 4589 aa9.23□□□□□ -0.93
GSE1-206ENST00000438180 C9orf92A6NGG3 77 aa9.23□□□□□ -0.93
GSE1-206ENST00000438180 C20orf166-AS1Q96NR2 134 aa9.21□□□□□ -0.94
GSE1-206ENST00000438180 CYP4F30PQ9H0H9 118 aa9.21□□□□□ -0.94
GSE1-206ENST00000438180 PCOTHQ58A44 107 aa9.2□□□□□ -0.94
GSE1-206ENST00000438180 A8MUU9 505 aa9.19□□□□□ -0.94
GSE1-206ENST00000438180 IGLV7-46A0A075B6I9 117 aa9.17□□□□□ -0.94
GSE1-206ENST00000438180 IGKV2-30P06310 120 aa9.17□□□□□ -0.94
GSE1-206ENST00000438180 DMBT1Q9UGM3 2413 aaPredicted RBP9.14□□□□□ -0.95
GSE1-206ENST00000438180 PRR4Q16378 134 aa9.13□□□□□ -0.95
GSE1-206ENST00000438180 Q75L30 129 aa9.13□□□□□ -0.95
GSE1-206ENST00000438180 KRTAP4-5Q9BYR2 181 aa9.11□□□□□ -0.95
GSE1-206ENST00000438180 MYCBP2O75592 4640 aa9.09□□□□□ -0.95
GSE1-206ENST00000438180 IGKV2D-30A0A075B6S6 120 aa9.09□□□□□ -0.95
GSE1-206ENST00000438180 C7orf65Q6ZTY9 151 aa9.09□□□□□ -0.95
GSE1-206ENST00000438180 HRES1P13985 223 aa9.05□□□□□ -0.96
GSE1-206ENST00000438180 SMIM26A0A096LP01 95 aa9.03□□□□□ -0.96
GSE1-206ENST00000438180 ATP11AUNQ6ZP68 121 aa9.01□□□□□ -0.97
GSE1-206ENST00000438180 J3QL48 77 aa9□□□□□ -0.97
GSE1-206ENST00000438180 RPL37P61927 97 aaKnown RBP9□□□□□ -0.97
GSE1-206ENST00000438180 BIRC6Q9NR09 4857 aa8.99□□□□□ -0.97
GSE1-206ENST00000438180 XP32Q5T750 250 aa8.99□□□□□ -0.97
GSE1-206ENST00000438180 TPRXLQ17RH7 258 aa8.97□□□□□ -0.97
GSE1-206ENST00000438180 ACYP2P14621 99 aa8.97□□□□□ -0.97
GSE1-206ENST00000438180 COA5Q86WW8 74 aa8.97□□□□□ -0.97
GSE1-206ENST00000438180 DMAC1Q96GE9 116 aa8.97□□□□□ -0.97
GSE1-206ENST00000438180 SPINK7P58062 85 aa8.92□□□□□ -0.98
GSE1-206ENST00000438180 HERC2O95714 4834 aa8.91□□□□□ -0.98
GSE1-206ENST00000438180 A8MUN3 132 aa8.88□□□□□ -0.99
GSE1-206ENST00000438180 C4orf26Q17RF5 130 aa8.88□□□□□ -0.99
GSE1-206ENST00000438180 ABCA13Q86UQ4 5058 aa8.86□□□□□ -0.99
GSE1-206ENST00000438180 CHKB-CPT1BH3BT56 60 aa8.84□□□□□ -0.99
GSE1-206ENST00000438180 V9GYY9 64 aa8.84□□□□□ -0.99
GSE1-206ENST00000438180 Q1T7F1 81 aa8.82□□□□□ -1
GSE1-206ENST00000438180 MPLKIPQ8TAP9 179 aa8.82□□□□□ -1
GSE1-206ENST00000438180 PRO0628Q9UI54 55 aa8.8□□□□□ -1
GSE1-206ENST00000438180 COX6B2Q6YFQ2 88 aa8.73□□□□□ -1.01
GSE1-206ENST00000438180 SEC61BP60468 96 aaKnown RBP8.68□□□□□ -1.02
GSE1-206ENST00000438180 SPTSSBQ8NFR3 76 aa8.68□□□□□ -1.02
GSE1-206ENST00000438180 LINC01558Q9Y6Z2 57 aa8.66□□□□□ -1.02
GSE1-206ENST00000438180 KRTAP3-1Q9BYR8 98 aa8.66□□□□□ -1.02
GSE1-206ENST00000438180 PSPHP1O15172 72 aa8.62□□□□□ -1.03
GSE1-206ENST00000438180 PRR15LQ9BU68 103 aa8.61□□□□□ -1.03
GSE1-206ENST00000438180 LRP2P98164 4655 aa8.59□□□□□ -1.04
GSE1-206ENST00000438180 LPAP08519 4548 aa8.58□□□□□ -1.04
GSE1-206ENST00000438180 RBM12B-AS1Q9P1G2 102 aa8.57□□□□□ -1.04
GSE1-206ENST00000438180 Q5VV11 94 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms