RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 SPAG11AQ6PDA7 123 aa4.03□□□□□ -1.76
LSM3P3-201ENST00000436601 J3QR89 54 aa4.02□□□□□ -1.77
LSM3P3-201ENST00000436601 SPINK1P00995 79 aa4.02□□□□□ -1.77
LSM3P3-201ENST00000436601 ACYP1P07311 99 aa4.02□□□□□ -1.77
LSM3P3-201ENST00000436601 NOTCH2NLQ7Z3S9 236 aa4.02□□□□□ -1.77
LSM3P3-201ENST00000436601 K7ERU9 68 aa4.01□□□□□ -1.77
LSM3P3-201ENST00000436601 RPS29P62273 56 aaKnown RBP4.01□□□□□ -1.77
LSM3P3-201ENST00000436601 Q5XG85 94 aa4.01□□□□□ -1.77
LSM3P3-201ENST00000436601 ABCA13Q86UQ4 5058 aa3.99□□□□□ -1.77
LSM3P3-201ENST00000436601 NREPQ16612 68 aa3.99□□□□□ -1.77
LSM3P3-201ENST00000436601 ASB16-AS1Q495Z4 193 aa3.99□□□□□ -1.77
LSM3P3-201ENST00000436601 Q96NJ1 140 aa3.99□□□□□ -1.77
LSM3P3-201ENST00000436601 LINC00472Q9H8W2 130 aa3.99□□□□□ -1.77
LSM3P3-201ENST00000436601 IGLV7-46A0A075B6I9 117 aa3.98□□□□□ -1.77
LSM3P3-201ENST00000436601 DEFB116Q30KQ4 102 aa3.98□□□□□ -1.77
LSM3P3-201ENST00000436601 C1orf195Q5TG92 126 aa3.98□□□□□ -1.77
LSM3P3-201ENST00000436601 LIMD2Q9BT23 127 aa3.98□□□□□ -1.77
LSM3P3-201ENST00000436601 KRTAP4-9Q9BYQ8 210 aa3.98□□□□□ -1.77
LSM3P3-201ENST00000436601 UBL5Q9BZL1 73 aa3.98□□□□□ -1.77
LSM3P3-201ENST00000436601 SS18L2Q9UHA2 77 aa3.98□□□□□ -1.77
LSM3P3-201ENST00000436601 OCR1Q9BZK8 76 aa3.97□□□□□ -1.77
LSM3P3-201ENST00000436601 PKHD1L1Q86WI1 4243 aa3.97□□□□□ -1.77
LSM3P3-201ENST00000436601 LRP1Q07954 4544 aaKnown RBP3.95□□□□□ -1.78
LSM3P3-201ENST00000436601 LINC00643Q86TS7 51 aa3.95□□□□□ -1.78
LSM3P3-201ENST00000436601 RETNLBQ9BQ08 111 aa3.95□□□□□ -1.78
LSM3P3-201ENST00000436601 KRTAP4-7Q9BYR0 210 aa3.95□□□□□ -1.78
LSM3P3-201ENST00000436601 FLG2Q5D862 2391 aaPredicted RBP3.94□□□□□ -1.78
LSM3P3-201ENST00000436601 BPY2O14599 106 aa3.94□□□□□ -1.78
LSM3P3-201ENST00000436601 IGKV4-1P06312 121 aa3.94□□□□□ -1.78
LSM3P3-201ENST00000436601 DSCR10P59022 87 aa3.94□□□□□ -1.78
LSM3P3-201ENST00000436601 SIGMAR1Q99720 223 aa3.94□□□□□ -1.78
LSM3P3-201ENST00000436601 IGKV3D-7A0A0C4DH55 119 aa3.93□□□□□ -1.78
LSM3P3-201ENST00000436601 J3KT08 172 aa3.93□□□□□ -1.78
LSM3P3-201ENST00000436601 CXCL6P80162 114 aa3.93□□□□□ -1.78
LSM3P3-201ENST00000436601 MYCBP2O75592 4640 aa3.92□□□□□ -1.78
LSM3P3-201ENST00000436601 A8MWP4 228 aa3.92□□□□□ -1.78
LSM3P3-201ENST00000436601 Q8N9L7 120 aa3.92□□□□□ -1.78
LSM3P3-201ENST00000436601 PCLOQ9Y6V0 5065 aa3.92□□□□□ -1.78
LSM3P3-201ENST00000436601 MT-ATP8P03928 68 aa3.91□□□□□ -1.78
LSM3P3-201ENST00000436601 ATP5EP2Q5VTU8 51 aa3.91□□□□□ -1.78
LSM3P3-201ENST00000436601 FAT3Q8TDW7 4589 aa3.91□□□□□ -1.78
LSM3P3-201ENST00000436601 KRTAP4-11Q9BYQ6 195 aa3.91□□□□□ -1.78
LSM3P3-201ENST00000436601 K7EQZ3 153 aa3.9□□□□□ -1.79
LSM3P3-201ENST00000436601 PRR15Q8IV56 129 aa3.9□□□□□ -1.79
LSM3P3-201ENST00000436601 A0A1B0GVX0 72 aa3.89□□□□□ -1.79
LSM3P3-201ENST00000436601 FP248Q71RG6 208 aaPredicted RBP3.89□□□□□ -1.79
LSM3P3-201ENST00000436601 IGHV6-1A0A0B4J1U7 121 aa3.88□□□□□ -1.79
LSM3P3-201ENST00000436601 NDUFB1O75438 58 aa3.88□□□□□ -1.79
LSM3P3-201ENST00000436601 PRR4Q16378 134 aa3.88□□□□□ -1.79
LSM3P3-201ENST00000436601 HIST1H4AP62805 103 aaKnown RBP3.87□□□□□ -1.79
LSM3P3-201ENST00000436601 TNXBP22105 4242 aa3.87□□□□□ -1.79
LSM3P3-201ENST00000436601 A0A087WVE0 104 aa3.86□□□□□ -1.79
LSM3P3-201ENST00000436601 MMP24-AS1A0A0U1RRL7 71 aa3.86□□□□□ -1.79
LSM3P3-201ENST00000436601 KRTAP13-3Q3SY46 172 aa3.86□□□□□ -1.79
LSM3P3-201ENST00000436601 IMUPQ9GZP8 106 aa3.86□□□□□ -1.79
LSM3P3-201ENST00000436601 C8orf17Q9NRJ1 99 aa3.86□□□□□ -1.79
LSM3P3-201ENST00000436601 NDUFAF8A1L188 74 aa3.85□□□□□ -1.79
LSM3P3-201ENST00000436601 KRTAP16-1A8MUX0 517 aa3.85□□□□□ -1.79
LSM3P3-201ENST00000436601 C8orf87E5RJ46 101 aa3.85□□□□□ -1.79
LSM3P3-201ENST00000436601 LINC00313P59037 77 aa3.85□□□□□ -1.79
LSM3P3-201ENST00000436601 SEC61GP60059 68 aa3.85□□□□□ -1.79
LSM3P3-201ENST00000436601 C9orf92A6NGG3 77 aa3.84□□□□□ -1.79
LSM3P3-201ENST00000436601 HCG22E2RYF7 251 aa3.83□□□□□ -1.8
LSM3P3-201ENST00000436601 CASC2Q6XLA1 102 aa3.83□□□□□ -1.8
LSM3P3-201ENST00000436601 WFDC13Q8IUB5 93 aa3.83□□□□□ -1.8
LSM3P3-201ENST00000436601 DMBT1Q9UGM3 2413 aaPredicted RBP3.82□□□□□ -1.8
LSM3P3-201ENST00000436601 hDV103S1A0JD37 113 aa3.82□□□□□ -1.8
LSM3P3-201ENST00000436601 TPRXLQ17RH7 258 aa3.82□□□□□ -1.8
LSM3P3-201ENST00000436601 LCE1AQ5T7P2 110 aa3.82□□□□□ -1.8
LSM3P3-201ENST00000436601 TMEM254Q8TBM7 123 aa3.81□□□□□ -1.8
LSM3P3-201ENST00000436601 MRPL34Q9BQ48 92 aaKnown RBP3.8□□□□□ -1.8
LSM3P3-201ENST00000436601 C20orf166-AS1Q96NR2 134 aa3.79□□□□□ -1.8
LSM3P3-201ENST00000436601 FAM236AA0A1B0GUQ0 79 aa3.78□□□□□ -1.8
LSM3P3-201ENST00000436601 FAM236BA0A1B0GV22 79 aa3.78□□□□□ -1.8
LSM3P3-201ENST00000436601 A8MUU9 505 aa3.78□□□□□ -1.8
LSM3P3-201ENST00000436601 RPL37P61927 97 aaKnown RBP3.76□□□□□ -1.81
LSM3P3-201ENST00000436601 NDUFS5O43920 106 aa3.75□□□□□ -1.81
LSM3P3-201ENST00000436601 SCGB1A1P11684 91 aa3.75□□□□□ -1.81
LSM3P3-201ENST00000436601 MT3P25713 68 aa3.75□□□□□ -1.81
LSM3P3-201ENST00000436601 Q5W150 140 aa3.74□□□□□ -1.81
LSM3P3-201ENST00000436601 KRTAP4-2Q9BYR5 136 aa3.74□□□□□ -1.81
LSM3P3-201ENST00000436601 ZCCHC13Q8WW36 166 aaKnown RBP3.73□□□□□ -1.81
LSM3P3-201ENST00000436601 TP53AIP1Q9HCN2 124 aa3.73□□□□□ -1.81
LSM3P3-201ENST00000436601 HERC1Q15751 4861 aa3.73□□□□□ -1.81
LSM3P3-201ENST00000436601 ATOX1O00244 68 aa3.72□□□□□ -1.81
LSM3P3-201ENST00000436601 UQCRQO14949 82 aa3.72□□□□□ -1.81
LSM3P3-201ENST00000436601 TRAV7A0A075B6U4 112 aa3.71□□□□□ -1.82
LSM3P3-201ENST00000436601 PCOTHQ58A44 107 aa3.71□□□□□ -1.82
LSM3P3-201ENST00000436601 ATP11AUNQ6ZP68 121 aa3.71□□□□□ -1.82
LSM3P3-201ENST00000436601 SMIM20Q8N5G0 67 aa3.71□□□□□ -1.82
LSM3P3-201ENST00000436601 HMCN2Q8NDA2 5059 aa3.71□□□□□ -1.82
LSM3P3-201ENST00000436601 C5orf47Q569G3 176 aa3.69□□□□□ -1.82
LSM3P3-201ENST00000436601 SERP2Q8N6R1 65 aa3.69□□□□□ -1.82
LSM3P3-201ENST00000436601 TRAV22A0A0B4J277 110 aa3.68□□□□□ -1.82
LSM3P3-201ENST00000436601 H0Y9P7 68 aa3.68□□□□□ -1.82
LSM3P3-201ENST00000436601 LPAP08519 4548 aa3.68□□□□□ -1.82
LSM3P3-201ENST00000436601 ANAPC13Q9BS18 74 aa3.67□□□□□ -1.82
LSM3P3-201ENST00000436601 COX7CP15954 63 aa3.66□□□□□ -1.82
LSM3P3-201ENST00000436601 KRTAP4-1Q9BYQ7 146 aa3.66□□□□□ -1.82
LSM3P3-201ENST00000436601 A0A0U1RQV1 116 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms