RNA–Protein interactions for RNA: ENST00000434476.6

SCRN1-207, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-207ENST00000434476 FRAS1Q86XX4 4008 aa7.73□□□□□ -1.17
SCRN1-207ENST00000434476 C4orf26Q17RF5 130 aa7.71□□□□□ -1.18
SCRN1-207ENST00000434476 FP248Q71RG6 208 aaPredicted RBP7.71□□□□□ -1.18
SCRN1-207ENST00000434476 SVIPQ8NHG7 77 aa7.71□□□□□ -1.18
SCRN1-207ENST00000434476 KRTAP13-2Q52LG2 175 aa7.7□□□□□ -1.18
SCRN1-207ENST00000434476 LCE2AQ5TA79 106 aaPredicted RBP7.7□□□□□ -1.18
SCRN1-207ENST00000434476 C8orf87E5RJ46 101 aa7.69□□□□□ -1.18
SCRN1-207ENST00000434476 A0A087X002 238 aa7.68□□□□□ -1.18
SCRN1-207ENST00000434476 SPINK6Q6UWN8 80 aa7.68□□□□□ -1.18
SCRN1-207ENST00000434476 LINC00336Q6ZUF6 198 aa7.68□□□□□ -1.18
SCRN1-207ENST00000434476 PKD1P98161 4303 aa7.67□□□□□ -1.18
SCRN1-207ENST00000434476 NDUFS5O43920 106 aa7.67□□□□□ -1.18
SCRN1-207ENST00000434476 KRTAP1-4P0C5Y4 121 aa7.67□□□□□ -1.18
SCRN1-207ENST00000434476 NOTCH2NLQ7Z3S9 236 aa7.67□□□□□ -1.18
SCRN1-207ENST00000434476 FAT2Q9NYQ8 4349 aa7.67□□□□□ -1.18
SCRN1-207ENST00000434476 IGLV7-46A0A075B6I9 117 aa7.63□□□□□ -1.19
SCRN1-207ENST00000434476 LIMD2Q9BT23 127 aa7.63□□□□□ -1.19
SCRN1-207ENST00000434476 PRR4Q16378 134 aa7.62□□□□□ -1.19
SCRN1-207ENST00000434476 C1orf195Q5TG92 126 aa7.62□□□□□ -1.19
SCRN1-207ENST00000434476 HYDINQ4G0P3 5121 aa7.62□□□□□ -1.19
SCRN1-207ENST00000434476 PLA2G1BP04054 148 aaKnown RBP7.61□□□□□ -1.19
SCRN1-207ENST00000434476 LRP1BQ9NZR2 4599 aa7.61□□□□□ -1.19
SCRN1-207ENST00000434476 LINC00313P59037 77 aa7.6□□□□□ -1.19
SCRN1-207ENST00000434476 C4orf48Q5BLP8 95 aa7.6□□□□□ -1.19
SCRN1-207ENST00000434476 LOC101927531A0A1B0GV80 90 aa7.59□□□□□ -1.19
SCRN1-207ENST00000434476 Q1T7F1 81 aa7.58□□□□□ -1.2
SCRN1-207ENST00000434476 TYMSOSQ8TAI1 123 aa7.58□□□□□ -1.2
SCRN1-207ENST00000434476 SPINK1P00995 79 aa7.57□□□□□ -1.2
SCRN1-207ENST00000434476 KRTAP13-3Q3SY46 172 aa7.57□□□□□ -1.2
SCRN1-207ENST00000434476 LOC100996750A0A140TA64 210 aa7.56□□□□□ -1.2
SCRN1-207ENST00000434476 MPLKIPQ8TAP9 179 aa7.56□□□□□ -1.2
SCRN1-207ENST00000434476 KRTAP4-6Q9BYQ5 205 aa7.56□□□□□ -1.2
SCRN1-207ENST00000434476 Q8N9P0 234 aaPredicted RBP7.55□□□□□ -1.2
SCRN1-207ENST00000434476 A0A1B0GVY2 172 aa7.55□□□□□ -1.2
SCRN1-207ENST00000434476 PCOTHQ58A44 107 aa7.55□□□□□ -1.2
SCRN1-207ENST00000434476 Q5W150 140 aa7.54□□□□□ -1.2
SCRN1-207ENST00000434476 V9GYY9 64 aa7.54□□□□□ -1.2
SCRN1-207ENST00000434476 RPS29P62273 56 aaKnown RBP7.53□□□□□ -1.2
SCRN1-207ENST00000434476 SPAG11AQ6PDA7 123 aa7.53□□□□□ -1.2
SCRN1-207ENST00000434476 FAM229AH3BQW9 127 aa7.52□□□□□ -1.21
SCRN1-207ENST00000434476 SACSQ9NZJ4 4579 aa7.5□□□□□ -1.21
SCRN1-207ENST00000434476 KRTAP16-1A8MUX0 517 aa7.49□□□□□ -1.21
SCRN1-207ENST00000434476 COA5Q86WW8 74 aa7.49□□□□□ -1.21
SCRN1-207ENST00000434476 LINC00304Q8N9R0 145 aa7.48□□□□□ -1.21
SCRN1-207ENST00000434476 VPS13BQ7Z7G8 4022 aa7.48□□□□□ -1.21
SCRN1-207ENST00000434476 PRR26Q8N8Z3 221 aa7.47□□□□□ -1.21
SCRN1-207ENST00000434476 SMR3BP02814 79 aaPredicted RBP7.45□□□□□ -1.22
SCRN1-207ENST00000434476 KRTAP10-4P60372 401 aaPredicted RBP7.43□□□□□ -1.22
SCRN1-207ENST00000434476 IGKV2-30P06310 120 aa7.43□□□□□ -1.22
SCRN1-207ENST00000434476 PRO0628Q9UI54 55 aa7.42□□□□□ -1.22
SCRN1-207ENST00000434476 DYNC1H1Q14204 4646 aaKnown RBP7.42□□□□□ -1.22
SCRN1-207ENST00000434476 HRES1P13985 223 aa7.41□□□□□ -1.22
SCRN1-207ENST00000434476 ACYP2P14621 99 aa7.38□□□□□ -1.23
SCRN1-207ENST00000434476 PSPHP1O15172 72 aa7.37□□□□□ -1.23
SCRN1-207ENST00000434476 RETNLBQ9BQ08 111 aa7.36□□□□□ -1.23
SCRN1-207ENST00000434476 LCE2CQ5TA81 110 aa7.36□□□□□ -1.23
SCRN1-207ENST00000434476 BRK1Q8WUW1 75 aa7.36□□□□□ -1.23
SCRN1-207ENST00000434476 DMAC1Q96GE9 116 aa7.36□□□□□ -1.23
SCRN1-207ENST00000434476 A8MUN3 132 aa7.35□□□□□ -1.23
SCRN1-207ENST00000434476 PKHD1P08F94 4074 aa7.34□□□□□ -1.23
SCRN1-207ENST00000434476 Q5VV11 94 aa7.33□□□□□ -1.24
SCRN1-207ENST00000434476 LINC01558Q9Y6Z2 57 aa7.33□□□□□ -1.24
SCRN1-207ENST00000434476 RYR2Q92736 4967 aa7.32□□□□□ -1.24
SCRN1-207ENST00000434476 APOBP04114 4563 aaKnown RBP7.31□□□□□ -1.24
SCRN1-207ENST00000434476 PRR15LQ9BU68 103 aa7.3□□□□□ -1.24
SCRN1-207ENST00000434476 IGKV2D-30A0A075B6S6 120 aa7.28□□□□□ -1.24
SCRN1-207ENST00000434476 Q75L30 129 aa7.28□□□□□ -1.24
SCRN1-207ENST00000434476 A8MUU9 505 aa7.26□□□□□ -1.25
SCRN1-207ENST00000434476 C20orf166-AS1Q96NR2 134 aa7.26□□□□□ -1.25
SCRN1-207ENST00000434476 PKHD1L1Q86WI1 4243 aa7.26□□□□□ -1.25
SCRN1-207ENST00000434476 CHKB-CPT1BH3BT56 60 aa7.25□□□□□ -1.25
SCRN1-207ENST00000434476 LORP23490 312 aaPredicted RBP7.24□□□□□ -1.25
SCRN1-207ENST00000434476 C7orf65Q6ZTY9 151 aa7.24□□□□□ -1.25
SCRN1-207ENST00000434476 FAT1Q14517 4588 aa7.22□□□□□ -1.25
SCRN1-207ENST00000434476 C9orf92A6NGG3 77 aa7.19□□□□□ -1.26
SCRN1-207ENST00000434476 KRTAP10-8P60410 259 aa7.19□□□□□ -1.26
SCRN1-207ENST00000434476 A6NED7 52 aa7.16□□□□□ -1.26
SCRN1-207ENST00000434476 Q5VSD8 79 aa7.16□□□□□ -1.26
SCRN1-207ENST00000434476 Q8N1X5 172 aa7.16□□□□□ -1.26
SCRN1-207ENST00000434476 J3QL48 77 aa7.15□□□□□ -1.27
SCRN1-207ENST00000434476 KMT2CQ8NEZ4 4911 aaKnown RBP7.12□□□□□ -1.27
SCRN1-207ENST00000434476 LCA10Q71F78 164 aa7.11□□□□□ -1.27
SCRN1-207ENST00000434476 CDC42SE1Q9NRR8 79 aa7.11□□□□□ -1.27
SCRN1-207ENST00000434476 A0A1B0GU69 56 aa7.08□□□□□ -1.28
SCRN1-207ENST00000434476 SPINK7P58062 85 aa7.07□□□□□ -1.28
SCRN1-207ENST00000434476 ATP11AUNQ6ZP68 121 aa7.07□□□□□ -1.28
SCRN1-207ENST00000434476 FLG2Q5D862 2391 aaPredicted RBP7.06□□□□□ -1.28
SCRN1-207ENST00000434476 SPTSSBQ8NFR3 76 aa7.05□□□□□ -1.28
SCRN1-207ENST00000434476 A8MU10 97 aa7.04□□□□□ -1.28
SCRN1-207ENST00000434476 HSPG2P98160 4391 aa7.03□□□□□ -1.28
SCRN1-207ENST00000434476 TNXBP22105 4242 aa7.01□□□□□ -1.29
SCRN1-207ENST00000434476 RYR1P21817 5038 aa7□□□□□ -1.29
SCRN1-207ENST00000434476 FAT3Q8TDW7 4589 aa7□□□□□ -1.29
SCRN1-207ENST00000434476 KRTAP3-1Q9BYR8 98 aa6.99□□□□□ -1.29
SCRN1-207ENST00000434476 PMAIP1Q13794 54 aa6.98□□□□□ -1.29
SCRN1-207ENST00000434476 RPL37P61927 97 aaKnown RBP6.98□□□□□ -1.29
SCRN1-207ENST00000434476 KRTAP17-1Q9BYP8 105 aa6.98□□□□□ -1.29
SCRN1-207ENST00000434476 COX6B2Q6YFQ2 88 aa6.97□□□□□ -1.29
SCRN1-207ENST00000434476 MT1HL1P0DM35 61 aa6.96□□□□□ -1.3
SCRN1-207ENST00000434476 SEC61GP60059 68 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms