RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 CSAG1Q6PB30 78 aa2.19□□□□□ -2.06
SHPRH-205ENST00000433355 C4orf26Q17RF5 130 aa2.18□□□□□ -2.06
SHPRH-205ENST00000433355 A0A1B0GU33 70 aa2.18□□□□□ -2.06
SHPRH-205ENST00000433355 PRR4Q16378 134 aa2.17□□□□□ -2.06
SHPRH-205ENST00000433355 H0YAA0 97 aa2.17□□□□□ -2.06
SHPRH-205ENST00000433355 PRB2P02812 416 aaPredicted RBP2.17□□□□□ -2.06
SHPRH-205ENST00000433355 CRIPTQ9P021 101 aa2.17□□□□□ -2.06
SHPRH-205ENST00000433355 MT3P25713 68 aa2.17□□□□□ -2.06
SHPRH-205ENST00000433355 KRTAP7-1Q8IUC3 87 aa2.16□□□□□ -2.06
SHPRH-205ENST00000433355 TPRXLQ17RH7 258 aa2.16□□□□□ -2.06
SHPRH-205ENST00000433355 PP632Q6XCG6 107 aa2.16□□□□□ -2.06
SHPRH-205ENST00000433355 DEFB116Q30KQ4 102 aa2.15□□□□□ -2.06
SHPRH-205ENST00000433355 KRTAP13-3Q3SY46 172 aa2.15□□□□□ -2.07
SHPRH-205ENST00000433355 KRTAP1-4P0C5Y4 121 aa2.14□□□□□ -2.07
SHPRH-205ENST00000433355 LINC01554Q52M75 96 aa2.13□□□□□ -2.07
SHPRH-205ENST00000433355 RPL37P61927 97 aaKnown RBP2.13□□□□□ -2.07
SHPRH-205ENST00000433355 XIRP2A4UGR9 3374 aa2.13□□□□□ -2.07
SHPRH-205ENST00000433355 SPINK7P58062 85 aa2.13□□□□□ -2.07
SHPRH-205ENST00000433355 KRTAP13-2Q52LG2 175 aa2.12□□□□□ -2.07
SHPRH-205ENST00000433355 A6NN06 94 aa2.12□□□□□ -2.07
SHPRH-205ENST00000433355 C9orf92A6NGG3 77 aa2.12□□□□□ -2.07
SHPRH-205ENST00000433355 ROMO1P60602 79 aa2.12□□□□□ -2.07
SHPRH-205ENST00000433355 H1FX-AS1Q4G0G2 97 aa2.12□□□□□ -2.07
SHPRH-205ENST00000433355 CYSTM1Q9H1C7 97 aa2.12□□□□□ -2.07
SHPRH-205ENST00000433355 SPTBN5Q9NRC6 3674 aaKnown RBP2.1□□□□□ -2.07
SHPRH-205ENST00000433355 KRTAP10-1P60331 282 aa2.1□□□□□ -2.07
SHPRH-205ENST00000433355 Q8N1X5 172 aa2.1□□□□□ -2.07
SHPRH-205ENST00000433355 S4R3F8 94 aa2.1□□□□□ -2.07
SHPRH-205ENST00000433355 Q5VSD8 79 aa2.09□□□□□ -2.07
SHPRH-205ENST00000433355 KRTAP16-1A8MUX0 517 aa2.09□□□□□ -2.07
SHPRH-205ENST00000433355 J3QL48 77 aa2.08□□□□□ -2.08
SHPRH-205ENST00000433355 KRTAP10-2P60368 255 aa2.07□□□□□ -2.08
SHPRH-205ENST00000433355 VCANP13611 3396 aa2.07□□□□□ -2.08
SHPRH-205ENST00000433355 ZFHX3Q15911 3703 aa2.07□□□□□ -2.08
SHPRH-205ENST00000433355 KRTAP23-1A1A580 65 aa2.07□□□□□ -2.08
SHPRH-205ENST00000433355 XP32Q5T750 250 aa2.07□□□□□ -2.08
SHPRH-205ENST00000433355 CDH23Q9H251 3354 aa2.06□□□□□ -2.08
SHPRH-205ENST00000433355 A0A1B0GVY2 172 aa2.05□□□□□ -2.08
SHPRH-205ENST00000433355 R4GN34 69 aa2.05□□□□□ -2.08
SHPRH-205ENST00000433355 KRTAP25-1Q3LHN0 102 aa2.04□□□□□ -2.08
SHPRH-205ENST00000433355 MYO15AQ9UKN7 3530 aa2.04□□□□□ -2.08
SHPRH-205ENST00000433355 KRTAP11-1Q8IUC1 163 aa2.03□□□□□ -2.08
SHPRH-205ENST00000433355 CAMK2N1Q7Z7J9 78 aa2.03□□□□□ -2.08
SHPRH-205ENST00000433355 SPENQ96T58 3664 aaKnown RBP2.03□□□□□ -2.08
SHPRH-205ENST00000433355 LUZP6Q538Z0 58 aa2.03□□□□□ -2.09
SHPRH-205ENST00000433355 ADM2Q7Z4H4 148 aa2.01□□□□□ -2.09
SHPRH-205ENST00000433355 TNP1P09430 55 aa2.01□□□□□ -2.09
SHPRH-205ENST00000433355 A0A0G2JQZ4 141 aa2□□□□□ -2.09
SHPRH-205ENST00000433355 DCHS1Q96JQ0 3298 aa1.99□□□□□ -2.09
SHPRH-205ENST00000433355 LOC400499M0QZD8 3231 aa1.99□□□□□ -2.09
SHPRH-205ENST00000433355 KRTAP10-8P60410 259 aa1.99□□□□□ -2.09
SHPRH-205ENST00000433355 A0A0A0MQY5 61 aa1.99□□□□□ -2.09
SHPRH-205ENST00000433355 TRRAPQ9Y4A5 3859 aa1.98□□□□□ -2.09
SHPRH-205ENST00000433355 ZFHX4Q86UP3 3567 aa1.98□□□□□ -2.09
SHPRH-205ENST00000433355 NBPF19A0A087WUL8 3843 aa1.98□□□□□ -2.09
SHPRH-205ENST00000433355 AKAP9Q99996 3911 aa1.97□□□□□ -2.09
SHPRH-205ENST00000433355 ANK2Q01484 3957 aa1.97□□□□□ -2.09
SHPRH-205ENST00000433355 CUBNO60494 3623 aa1.97□□□□□ -2.09
SHPRH-205ENST00000433355 RYR1P21817 5038 aa1.95□□□□□ -2.1
SHPRH-205ENST00000433355 H3BS24 57 aa1.94□□□□□ -2.1
SHPRH-205ENST00000433355 SMR3BP02814 79 aaPredicted RBP1.94□□□□□ -2.1
SHPRH-205ENST00000433355 KRTAP10-4P60372 401 aaPredicted RBP1.94□□□□□ -2.1
SHPRH-205ENST00000433355 SPINT4Q6UDR6 99 aa1.93□□□□□ -2.1
SHPRH-205ENST00000433355 DNAH14Q0VDD8 3507 aa1.93□□□□□ -2.1
SHPRH-205ENST00000433355 CELSR3Q9NYQ7 3312 aa1.92□□□□□ -2.1
SHPRH-205ENST00000433355 BSNQ9UPA5 3926 aa1.92□□□□□ -2.1
SHPRH-205ENST00000433355 PLAC4Q8WY50 150 aa1.92□□□□□ -2.1
SHPRH-205ENST00000433355 PRO2289Q9P1D8 64 aa1.92□□□□□ -2.1
SHPRH-205ENST00000433355 SMG1Q96Q15 3661 aaKnown RBP1.91□□□□□ -2.1
SHPRH-205ENST00000433355 ALMS1Q8TCU4 4167 aa1.91□□□□□ -2.1
SHPRH-205ENST00000433355 LAMA5O15230 3695 aa1.9□□□□□ -2.1
SHPRH-205ENST00000433355 C10orf95Q9H7T3 257 aa1.9□□□□□ -2.1
SHPRH-205ENST00000433355 DNAH3Q8TD57 4116 aa1.89□□□□□ -2.11
SHPRH-205ENST00000433355 DMDP11532 3685 aa1.88□□□□□ -2.11
SHPRH-205ENST00000433355 KRTAP13-4Q3LI77 160 aa1.88□□□□□ -2.11
SHPRH-205ENST00000433355 P0C880 135 aa1.87□□□□□ -2.11
SHPRH-205ENST00000433355 A0A0D9SG42 100 aa1.87□□□□□ -2.11
SHPRH-205ENST00000433355 SPEGQ15772 3267 aa1.87□□□□□ -2.11
SHPRH-205ENST00000433355 DNAH7Q8WXX0 4024 aa1.85□□□□□ -2.11
SHPRH-205ENST00000433355 CSMD1Q96PZ7 3565 aa1.85□□□□□ -2.11
SHPRH-205ENST00000433355 KRTAP3-3Q9BYR6 98 aa1.84□□□□□ -2.11
SHPRH-205ENST00000433355 KRTAP3-2Q9BYR7 98 aa1.84□□□□□ -2.11
SHPRH-205ENST00000433355 HECTD4Q9Y4D8 3996 aa1.84□□□□□ -2.12
SHPRH-205ENST00000433355 KRTAP10-6P60371 365 aaPredicted RBP1.83□□□□□ -2.12
SHPRH-205ENST00000433355 MT1HL1P0DM35 61 aa1.83□□□□□ -2.12
SHPRH-205ENST00000433355 PRAC1Q96KF2 57 aa1.83□□□□□ -2.12
SHPRH-205ENST00000433355 M0R2T5 61 aa1.83□□□□□ -2.12
SHPRH-205ENST00000433355 WDFY3Q8IZQ1 3526 aa1.82□□□□□ -2.12
SHPRH-205ENST00000433355 CMYA5Q8N3K9 4069 aa1.82□□□□□ -2.12
SHPRH-205ENST00000433355 KRTAP3-1Q9BYR8 98 aa1.82□□□□□ -2.12
SHPRH-205ENST00000433355 LYSTQ99698 3801 aa1.8□□□□□ -2.12
SHPRH-205ENST00000433355 MUC3AQ02505 3323 aa1.8□□□□□ -2.12
SHPRH-205ENST00000433355 VPS13CQ709C8 3753 aa1.8□□□□□ -2.12
SHPRH-205ENST00000433355 RELNP78509 3460 aa1.8□□□□□ -2.12
SHPRH-205ENST00000433355 PCLOQ9Y6V0 5065 aa1.79□□□□□ -2.12
SHPRH-205ENST00000433355 KRTAP12-1P59990 96 aa1.79□□□□□ -2.12
SHPRH-205ENST00000433355 CSMD3Q7Z407 3707 aa1.78□□□□□ -2.12
SHPRH-205ENST00000433355 SVEP1Q4LDE5 3571 aa1.78□□□□□ -2.12
SHPRH-205ENST00000433355 ASPMQ8IZT6 3477 aa1.78□□□□□ -2.13
SHPRH-205ENST00000433355 LCE2DQ5TA82 110 aaPredicted RBP1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms