RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 PLAC4Q8WY50 150 aa5.84□□□□□ -1.47
CCDC171-202ENST00000432954 USP9YO00507 2555 aaPredicted RBP5.83□□□□□ -1.48
CCDC171-202ENST00000432954 KRTAP1-1Q07627 177 aa5.83□□□□□ -1.48
CCDC171-202ENST00000432954 C14orf177Q52M58 125 aa5.83□□□□□ -1.48
CCDC171-202ENST00000432954 FBN1P35555 2871 aaKnown RBP5.82□□□□□ -1.48
CCDC171-202ENST00000432954 TEX15Q9BXT5 2789 aa5.82□□□□□ -1.48
CCDC171-202ENST00000432954 LRRK2Q5S007 2527 aa5.8□□□□□ -1.48
CCDC171-202ENST00000432954 FBN2P35556 2912 aa5.79□□□□□ -1.48
CCDC171-202ENST00000432954 CSPG4Q6UVK1 2322 aa5.79□□□□□ -1.48
CCDC171-202ENST00000432954 LINC01556Q5JQF7 62 aa5.78□□□□□ -1.48
CCDC171-202ENST00000432954 F8P00451 2351 aa5.78□□□□□ -1.48
CCDC171-202ENST00000432954 UTP20O75691 2785 aaKnown RBP5.77□□□□□ -1.49
CCDC171-202ENST00000432954 PTPN13Q12923 2485 aa5.77□□□□□ -1.49
CCDC171-202ENST00000432954 PDZD2O15018 2839 aa5.77□□□□□ -1.49
CCDC171-202ENST00000432954 H3BNG1 76 aa5.76□□□□□ -1.49
CCDC171-202ENST00000432954 SPACA4Q8TDM5 124 aa5.76□□□□□ -1.49
CCDC171-202ENST00000432954 MAPK1IP1LQ8NDC0 245 aa5.76□□□□□ -1.49
CCDC171-202ENST00000432954 VWFP04275 2813 aa5.75□□□□□ -1.49
CCDC171-202ENST00000432954 TENM4Q6N022 2769 aa5.75□□□□□ -1.49
CCDC171-202ENST00000432954 KRTAP13-1Q8IUC0 172 aa5.75□□□□□ -1.49
CCDC171-202ENST00000432954 Q8N1X5 172 aa5.74□□□□□ -1.49
CCDC171-202ENST00000432954 NAV2Q8IVL1 2488 aa5.73□□□□□ -1.49
CCDC171-202ENST00000432954 HELZ2Q9BYK8 2649 aaKnown RBP5.73□□□□□ -1.49
CCDC171-202ENST00000432954 SPART-AS1P0CW21 52 aa5.73□□□□□ -1.49
CCDC171-202ENST00000432954 HTN3P15516 51 aa5.72□□□□□ -1.49
CCDC171-202ENST00000432954 LCE1DQ5T752 114 aa5.72□□□□□ -1.49
CCDC171-202ENST00000432954 HIVEP2P31629 2446 aa5.72□□□□□ -1.49
CCDC171-202ENST00000432954 SETXQ7Z333 2677 aaKnown RBP5.72□□□□□ -1.49
CCDC171-202ENST00000432954 KRTAP23-1A1A580 65 aa5.71□□□□□ -1.5
CCDC171-202ENST00000432954 SPINK6Q6UWN8 80 aa5.7□□□□□ -1.5
CCDC171-202ENST00000432954 Q6ZRN7 208 aaPredicted RBP5.7□□□□□ -1.5
CCDC171-202ENST00000432954 ANK3Q12955 4377 aaKnown RBP5.7□□□□□ -1.5
CCDC171-202ENST00000432954 DEFB4AO15263 64 aa5.7□□□□□ -1.5
CCDC171-202ENST00000432954 KRTAP4-2Q9BYR5 136 aa5.69□□□□□ -1.5
CCDC171-202ENST00000432954 R4GN34 69 aa5.69□□□□□ -1.5
CCDC171-202ENST00000432954 TLN2Q9Y4G6 2542 aa5.69□□□□□ -1.5
CCDC171-202ENST00000432954 ITPR3Q14573 2671 aa5.68□□□□□ -1.5
CCDC171-202ENST00000432954 UNC79Q9P2D8 2635 aa5.68□□□□□ -1.5
CCDC171-202ENST00000432954 ABCA12Q86UK0 2595 aa5.67□□□□□ -1.5
CCDC171-202ENST00000432954 SRRM2Q9UQ35 2752 aaKnown RBP5.66□□□□□ -1.5
CCDC171-202ENST00000432954 JMJD1CQ15652 2540 aa5.65□□□□□ -1.51
CCDC171-202ENST00000432954 POLQO75417 2590 aa5.64□□□□□ -1.51
CCDC171-202ENST00000432954 FN1P02751 2386 aaKnown RBP5.64□□□□□ -1.51
CCDC171-202ENST00000432954 KRTAP4-9Q9BYQ8 210 aa5.64□□□□□ -1.51
CCDC171-202ENST00000432954 GCN1Q92616 2671 aaKnown RBP5.64□□□□□ -1.51
CCDC171-202ENST00000432954 CSMD3Q7Z407 3707 aa5.64□□□□□ -1.51
CCDC171-202ENST00000432954 S4R3F8 94 aa5.63□□□□□ -1.51
CCDC171-202ENST00000432954 KRTAP19-1Q8IUB9 90 aa5.63□□□□□ -1.51
CCDC171-202ENST00000432954 CCDC168Q8NDH2 2452 aa5.62□□□□□ -1.51
CCDC171-202ENST00000432954 VPS13CQ709C8 3753 aa5.62□□□□□ -1.51
CCDC171-202ENST00000432954 ITPR2Q14571 2701 aa5.62□□□□□ -1.51
CCDC171-202ENST00000432954 DEFB135Q30KP9 77 aa5.62□□□□□ -1.51
CCDC171-202ENST00000432954 FLNAP21333 2647 aaKnown RBP5.61□□□□□ -1.51
CCDC171-202ENST00000432954 CENPEQ02224 2701 aa5.61□□□□□ -1.51
CCDC171-202ENST00000432954 SONP18583 2426 aaKnown RBP5.61□□□□□ -1.51
CCDC171-202ENST00000432954 CSMD2Q7Z408 3487 aa5.61□□□□□ -1.51
CCDC171-202ENST00000432954 SMR3AQ99954 134 aa5.6□□□□□ -1.51
CCDC171-202ENST00000432954 MEGF8Q7Z7M0 2845 aa5.6□□□□□ -1.51
CCDC171-202ENST00000432954 MYO9AB2RTY4 2548 aa5.59□□□□□ -1.51
CCDC171-202ENST00000432954 FASNP49327 2511 aaKnown RBP5.59□□□□□ -1.52
CCDC171-202ENST00000432954 INE1O15225 51 aa5.57□□□□□ -1.52
CCDC171-202ENST00000432954 KRTAP13-4Q3LI77 160 aa5.57□□□□□ -1.52
CCDC171-202ENST00000432954 APLNQ9ULZ1 77 aa5.57□□□□□ -1.52
CCDC171-202ENST00000432954 ZANQ9Y493 2812 aa5.57□□□□□ -1.52
CCDC171-202ENST00000432954 NBEAL2Q6ZNJ1 2754 aa5.57□□□□□ -1.52
CCDC171-202ENST00000432954 A0A0D9SG42 100 aa5.56□□□□□ -1.52
CCDC171-202ENST00000432954 MXRA5Q9NR99 2828 aa5.56□□□□□ -1.52
CCDC171-202ENST00000432954 UBE2DNLQ8IWF7 75 aa5.55□□□□□ -1.52
CCDC171-202ENST00000432954 ZNF469Q96JG9 3925 aaPredicted RBP5.55□□□□□ -1.52
CCDC171-202ENST00000432954 KRTAP10-3P60369 221 aa5.53□□□□□ -1.52
CCDC171-202ENST00000432954 KRTAP10-6P60371 365 aaPredicted RBP5.53□□□□□ -1.52
CCDC171-202ENST00000432954 KRTAP10-8P60410 259 aa5.52□□□□□ -1.53
CCDC171-202ENST00000432954 DNAH1Q9P2D7 4330 aa5.52□□□□□ -1.53
CCDC171-202ENST00000432954 ACANP16112 2415 aa5.52□□□□□ -1.53
CCDC171-202ENST00000432954 HECTD1Q9ULT8 2610 aa5.52□□□□□ -1.53
CCDC171-202ENST00000432954 KRTAP3-1Q9BYR8 98 aa5.52□□□□□ -1.53
CCDC171-202ENST00000432954 KRTAP12-2P59991 146 aa5.5□□□□□ -1.53
CCDC171-202ENST00000432954 NSD1Q96L73 2696 aaPredicted RBP5.49□□□□□ -1.53
CCDC171-202ENST00000432954 HIVEP1P15822 2718 aa5.48□□□□□ -1.53
CCDC171-202ENST00000432954 CUBNO60494 3623 aa5.47□□□□□ -1.53
CCDC171-202ENST00000432954 MTORP42345 2549 aa5.46□□□□□ -1.53
CCDC171-202ENST00000432954 TRRAPQ9Y4A5 3859 aa5.46□□□□□ -1.53
CCDC171-202ENST00000432954 FRAS1Q86XX4 4008 aa5.46□□□□□ -1.54
CCDC171-202ENST00000432954 BAHCC1Q9P281 2608 aa5.45□□□□□ -1.54
CCDC171-202ENST00000432954 NIPBLQ6KC79 2804 aaeCLIP5.45□□□□□ -1.54
CCDC171-202ENST00000432954 VPS13DQ5THJ4 4388 aa5.43□□□□□ -1.54
CCDC171-202ENST00000432954 KRTAP12-1P59990 96 aa5.43□□□□□ -1.54
CCDC171-202ENST00000432954 NOTCH2Q04721 2471 aa5.4□□□□□ -1.55
CCDC171-202ENST00000432954 COL6A5A8TX70 2615 aa5.39□□□□□ -1.55
CCDC171-202ENST00000432954 KRTAP21-3Q3LHN1 58 aa5.38□□□□□ -1.55
CCDC171-202ENST00000432954 SPRR5A0A1B0GTR4 108 aa5.34□□□□□ -1.55
CCDC171-202ENST00000432954 KRTAP4-5Q9BYR2 181 aa5.34□□□□□ -1.55
CCDC171-202ENST00000432954 TEP1Q99973 2627 aaKnown RBP5.33□□□□□ -1.56
CCDC171-202ENST00000432954 FLNBO75369 2602 aaKnown RBP5.33□□□□□ -1.56
CCDC171-202ENST00000432954 KRTAP4-11Q9BYQ6 195 aa5.32□□□□□ -1.56
CCDC171-202ENST00000432954 NBEAL1Q6ZS30 2694 aa5.31□□□□□ -1.56
CCDC171-202ENST00000432954 KRTAP10-11P60412 298 aa5.3□□□□□ -1.56
CCDC171-202ENST00000432954 DMBT1Q9UGM3 2413 aaPredicted RBP5.3□□□□□ -1.56
CCDC171-202ENST00000432954 PP632Q6XCG6 107 aa5.29□□□□□ -1.56
CCDC171-202ENST00000432954 SETD2Q9BYW2 2564 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms