RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 TYMSOSQ8TAI1 123 aa11.29□□□□□ -0.6
VRK2-205ENST00000432057 NDUFC1O43677 76 aa11.29□□□□□ -0.6
VRK2-205ENST00000432057 NOTCH2NLQ7Z3S9 236 aa11.29□□□□□ -0.6
VRK2-205ENST00000432057 FAM236DA0A1B0GTK5 79 aa11.27□□□□□ -0.61
VRK2-205ENST00000432057 FAM236CP0DP71 79 aa11.27□□□□□ -0.61
VRK2-205ENST00000432057 Q5XG85 94 aa11.26□□□□□ -0.61
VRK2-205ENST00000432057 PRR26Q8N8Z3 221 aa11.25□□□□□ -0.61
VRK2-205ENST00000432057 ZCCHC13Q8WW36 166 aaKnown RBP11.25□□□□□ -0.61
VRK2-205ENST00000432057 C1orf195Q5TG92 126 aa11.24□□□□□ -0.61
VRK2-205ENST00000432057 LIMD2Q9BT23 127 aa11.23□□□□□ -0.61
VRK2-205ENST00000432057 H0Y9P7 68 aa11.22□□□□□ -0.61
VRK2-205ENST00000432057 MP68P56378 58 aa11.21□□□□□ -0.61
VRK2-205ENST00000432057 C4orf48Q5BLP8 95 aa11.21□□□□□ -0.61
VRK2-205ENST00000432057 MRPL34Q9BQ48 92 aaKnown RBP11.21□□□□□ -0.62
VRK2-205ENST00000432057 PKHD1L1Q86WI1 4243 aa11.19□□□□□ -0.62
VRK2-205ENST00000432057 NDUFS5O43920 106 aa11.18□□□□□ -0.62
VRK2-205ENST00000432057 LINC00208Q96KT6 92 aa11.18□□□□□ -0.62
VRK2-205ENST00000432057 TRAV22A0A0B4J277 110 aa11.16□□□□□ -0.62
VRK2-205ENST00000432057 SPINK1P00995 79 aa11.16□□□□□ -0.62
VRK2-205ENST00000432057 LINC00304Q8N9R0 145 aa11.16□□□□□ -0.62
VRK2-205ENST00000432057 TP53AIP1Q9HCN2 124 aa11.15□□□□□ -0.62
VRK2-205ENST00000432057 C8orf87E5RJ46 101 aa11.15□□□□□ -0.63
VRK2-205ENST00000432057 ATP5EP56381 51 aaPredicted RBP11.12□□□□□ -0.63
VRK2-205ENST00000432057 RPS28P62857 69 aaKnown RBP11.12□□□□□ -0.63
VRK2-205ENST00000432057 H3BPC8 53 aa11.11□□□□□ -0.63
VRK2-205ENST00000432057 OXTP01178 125 aa11.11□□□□□ -0.63
VRK2-205ENST00000432057 LINC00313P59037 77 aa11.09□□□□□ -0.63
VRK2-205ENST00000432057 C1orf64Q8NEQ6 169 aa11.09□□□□□ -0.63
VRK2-205ENST00000432057 HSPG2P98160 4391 aa11.08□□□□□ -0.64
VRK2-205ENST00000432057 SPAG11AQ6PDA7 123 aa11.07□□□□□ -0.64
VRK2-205ENST00000432057 FAM229AH3BQW9 127 aa11.06□□□□□ -0.64
VRK2-205ENST00000432057 RPS29P62273 56 aaKnown RBP11.06□□□□□ -0.64
VRK2-205ENST00000432057 SERP1Q9Y6X1 66 aa11.06□□□□□ -0.64
VRK2-205ENST00000432057 Q5VSD8 79 aa11.02□□□□□ -0.65
VRK2-205ENST00000432057 KRTAP16-1A8MUX0 517 aa11.01□□□□□ -0.65
VRK2-205ENST00000432057 RYR1P21817 5038 aa11.01□□□□□ -0.65
VRK2-205ENST00000432057 Q5W150 140 aa10.99□□□□□ -0.65
VRK2-205ENST00000432057 PRR4Q16378 134 aa10.98□□□□□ -0.65
VRK2-205ENST00000432057 Q8N9P0 234 aaPredicted RBP10.98□□□□□ -0.65
VRK2-205ENST00000432057 KRTAP13-3Q3SY46 172 aa10.97□□□□□ -0.65
VRK2-205ENST00000432057 PCOTHQ58A44 107 aa10.93□□□□□ -0.66
VRK2-205ENST00000432057 KRTAP17-1Q9BYP8 105 aa10.92□□□□□ -0.66
VRK2-205ENST00000432057 CYP4F30PQ9H0H9 118 aa10.91□□□□□ -0.66
VRK2-205ENST00000432057 EPPK1P58107 5090 aaKnown RBP10.91□□□□□ -0.66
VRK2-205ENST00000432057 RETNLBQ9BQ08 111 aa10.91□□□□□ -0.66
VRK2-205ENST00000432057 SPANXA2-OT1Q8N9U9 137 aa10.9□□□□□ -0.66
VRK2-205ENST00000432057 LRP1Q07954 4544 aaKnown RBP10.9□□□□□ -0.66
VRK2-205ENST00000432057 TNXBP22105 4242 aa10.88□□□□□ -0.67
VRK2-205ENST00000432057 LOC101927531A0A1B0GV80 90 aa10.87□□□□□ -0.67
VRK2-205ENST00000432057 KIAA1109Q2LD37 5005 aa10.86□□□□□ -0.67
VRK2-205ENST00000432057 FLG2Q5D862 2391 aaPredicted RBP10.85□□□□□ -0.67
VRK2-205ENST00000432057 Q8N1X5 172 aa10.84□□□□□ -0.67
VRK2-205ENST00000432057 FAT3Q8TDW7 4589 aa10.83□□□□□ -0.68
VRK2-205ENST00000432057 KRTAP10-8P60410 259 aa10.83□□□□□ -0.68
VRK2-205ENST00000432057 IGLV7-46A0A075B6I9 117 aa10.81□□□□□ -0.68
VRK2-205ENST00000432057 SMIM26A0A096LP01 95 aa10.8□□□□□ -0.68
VRK2-205ENST00000432057 C9orf92A6NGG3 77 aa10.79□□□□□ -0.68
VRK2-205ENST00000432057 FP248Q71RG6 208 aaPredicted RBP10.77□□□□□ -0.69
VRK2-205ENST00000432057 IGKV2-30P06310 120 aa10.75□□□□□ -0.69
VRK2-205ENST00000432057 IGKV2D-30A0A075B6S6 120 aa10.68□□□□□ -0.7
VRK2-205ENST00000432057 C4orf26Q17RF5 130 aa10.68□□□□□ -0.7
VRK2-205ENST00000432057 A8MUU9 505 aa10.67□□□□□ -0.7
VRK2-205ENST00000432057 HRES1P13985 223 aa10.67□□□□□ -0.7
VRK2-205ENST00000432057 C20orf166-AS1Q96NR2 134 aa10.66□□□□□ -0.7
VRK2-205ENST00000432057 COA5Q86WW8 74 aa10.66□□□□□ -0.7
VRK2-205ENST00000432057 MYCBP2O75592 4640 aa10.65□□□□□ -0.7
VRK2-205ENST00000432057 MPLKIPQ8TAP9 179 aa10.65□□□□□ -0.7
VRK2-205ENST00000432057 MT1HL1P0DM35 61 aa10.64□□□□□ -0.71
VRK2-205ENST00000432057 DMBT1Q9UGM3 2413 aaPredicted RBP10.58□□□□□ -0.72
VRK2-205ENST00000432057 C7orf65Q6ZTY9 151 aa10.56□□□□□ -0.72
VRK2-205ENST00000432057 KRTAP4-5Q9BYR2 181 aa10.55□□□□□ -0.72
VRK2-205ENST00000432057 BIRC6Q9NR09 4857 aa10.55□□□□□ -0.72
VRK2-205ENST00000432057 DMAC1Q96GE9 116 aa10.54□□□□□ -0.72
VRK2-205ENST00000432057 Q1T7F1 81 aa10.52□□□□□ -0.73
VRK2-205ENST00000432057 Q75L30 129 aa10.51□□□□□ -0.73
VRK2-205ENST00000432057 ACYP2P14621 99 aa10.49□□□□□ -0.73
VRK2-205ENST00000432057 HERC2O95714 4834 aa10.41□□□□□ -0.74
VRK2-205ENST00000432057 V9GYY9 64 aa10.41□□□□□ -0.74
VRK2-205ENST00000432057 XP32Q5T750 250 aa10.4□□□□□ -0.74
VRK2-205ENST00000432057 PSPHP1O15172 72 aa10.39□□□□□ -0.75
VRK2-205ENST00000432057 SPINK7P58062 85 aa10.38□□□□□ -0.75
VRK2-205ENST00000432057 RPL37P61927 97 aaKnown RBP10.38□□□□□ -0.75
VRK2-205ENST00000432057 CHKB-CPT1BH3BT56 60 aa10.37□□□□□ -0.75
VRK2-205ENST00000432057 A8MUN3 132 aa10.35□□□□□ -0.75
VRK2-205ENST00000432057 ATP11AUNQ6ZP68 121 aa10.35□□□□□ -0.75
VRK2-205ENST00000432057 ABCA13Q86UQ4 5058 aa10.32□□□□□ -0.76
VRK2-205ENST00000432057 PRR15LQ9BU68 103 aa10.32□□□□□ -0.76
VRK2-205ENST00000432057 LINC01558Q9Y6Z2 57 aa10.29□□□□□ -0.76
VRK2-205ENST00000432057 Q5VV11 94 aa10.27□□□□□ -0.76
VRK2-205ENST00000432057 KRTAP3-1Q9BYR8 98 aa10.23□□□□□ -0.77
VRK2-205ENST00000432057 J3QL48 77 aa10.22□□□□□ -0.77
VRK2-205ENST00000432057 TPRXLQ17RH7 258 aa10.22□□□□□ -0.77
VRK2-205ENST00000432057 BRK1Q8WUW1 75 aa10.19□□□□□ -0.78
VRK2-205ENST00000432057 COX6B2Q6YFQ2 88 aa10.16□□□□□ -0.78
VRK2-205ENST00000432057 LPAP08519 4548 aa10.14□□□□□ -0.79
VRK2-205ENST00000432057 LRP2P98164 4655 aa10.13□□□□□ -0.79
VRK2-205ENST00000432057 PRO0628Q9UI54 55 aa10.06□□□□□ -0.8
VRK2-205ENST00000432057 A0A1B0GU69 56 aa10.04□□□□□ -0.8
VRK2-205ENST00000432057 A6NED7 52 aa10.04□□□□□ -0.8
VRK2-205ENST00000432057 SPTSSBQ8NFR3 76 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms