RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 KRTAP13-1Q8IUC0 172 aa4.35□□□□□ -1.71
COL28A1-202ENST00000430711 UBE2DNLQ8IWF7 75 aa4.35□□□□□ -1.71
COL28A1-202ENST00000430711 DNAH11Q96DT5 4516 aa4.35□□□□□ -1.71
COL28A1-202ENST00000430711 A0A087X002 238 aa4.35□□□□□ -1.71
COL28A1-202ENST00000430711 IGLV9-49A0A0B4J1Y8 123 aa4.35□□□□□ -1.71
COL28A1-202ENST00000430711 NOTCH2NLQ7Z3S9 236 aa4.35□□□□□ -1.71
COL28A1-202ENST00000430711 PRR15Q8IV56 129 aa4.35□□□□□ -1.71
COL28A1-202ENST00000430711 Q96NJ1 140 aa4.35□□□□□ -1.71
COL28A1-202ENST00000430711 A0A1B0GW54 56 aa4.34□□□□□ -1.71
COL28A1-202ENST00000430711 DNAH5Q8TE73 4624 aa4.34□□□□□ -1.71
COL28A1-202ENST00000430711 TRAV22A0A0B4J277 110 aa4.34□□□□□ -1.72
COL28A1-202ENST00000430711 MMP24-AS1A0A0U1RRL7 71 aa4.34□□□□□ -1.72
COL28A1-202ENST00000430711 CASC2Q6XLA1 102 aa4.34□□□□□ -1.72
COL28A1-202ENST00000430711 C9orf163Q8N9P6 203 aa4.34□□□□□ -1.72
COL28A1-202ENST00000430711 H0Y9P7 68 aa4.33□□□□□ -1.72
COL28A1-202ENST00000430711 MOBPQ13875 183 aa4.33□□□□□ -1.72
COL28A1-202ENST00000430711 SPRR1BP22528 89 aa4.33□□□□□ -1.72
COL28A1-202ENST00000430711 A8MUN3 132 aa4.32□□□□□ -1.72
COL28A1-202ENST00000430711 A8MWP4 228 aa4.32□□□□□ -1.72
COL28A1-202ENST00000430711 H0Y9J4 135 aa4.32□□□□□ -1.72
COL28A1-202ENST00000430711 NBDYA0A0U1RRE5 68 aa4.31□□□□□ -1.72
COL28A1-202ENST00000430711 LRP1BQ9NZR2 4599 aa4.31□□□□□ -1.72
COL28A1-202ENST00000430711 PCOTHQ58A44 107 aa4.3□□□□□ -1.72
COL28A1-202ENST00000430711 CYP4F30PQ9H0H9 118 aa4.3□□□□□ -1.72
COL28A1-202ENST00000430711 B9D2Q9BPU9 175 aa4.3□□□□□ -1.72
COL28A1-202ENST00000430711 FAT2Q9NYQ8 4349 aa4.3□□□□□ -1.72
COL28A1-202ENST00000430711 SPACA4Q8TDM5 124 aa4.29□□□□□ -1.72
COL28A1-202ENST00000430711 CD164Q04900 197 aa4.28□□□□□ -1.72
COL28A1-202ENST00000430711 Q1T7F1 81 aa4.28□□□□□ -1.72
COL28A1-202ENST00000430711 PSORS1C2Q9UIG4 136 aa4.28□□□□□ -1.72
COL28A1-202ENST00000430711 PKD1P98161 4303 aa4.28□□□□□ -1.72
COL28A1-202ENST00000430711 PLA2G1BP04054 148 aaKnown RBP4.27□□□□□ -1.73
COL28A1-202ENST00000430711 MP68P56378 58 aa4.27□□□□□ -1.73
COL28A1-202ENST00000430711 Q5VV11 94 aa4.27□□□□□ -1.73
COL28A1-202ENST00000430711 IGHV6-1A0A0B4J1U7 121 aa4.26□□□□□ -1.73
COL28A1-202ENST00000430711 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.26□□□□□ -1.73
COL28A1-202ENST00000430711 A0A087WTM6 91 aa4.25□□□□□ -1.73
COL28A1-202ENST00000430711 ASB16-AS1Q495Z4 193 aa4.25□□□□□ -1.73
COL28A1-202ENST00000430711 Q6ZR54 194 aa4.25□□□□□ -1.73
COL28A1-202ENST00000430711 Q8N9P0 234 aaPredicted RBP4.25□□□□□ -1.73
COL28A1-202ENST00000430711 Q5W150 140 aa4.24□□□□□ -1.73
COL28A1-202ENST00000430711 C8orf17Q9NRJ1 99 aa4.24□□□□□ -1.73
COL28A1-202ENST00000430711 RTL8CO15255 209 aa4.23□□□□□ -1.73
COL28A1-202ENST00000430711 COA5Q86WW8 74 aa4.23□□□□□ -1.73
COL28A1-202ENST00000430711 ABCA13Q86UQ4 5058 aa4.23□□□□□ -1.73
COL28A1-202ENST00000430711 IGLV5-52A0A0A0MRZ9 124 aa4.23□□□□□ -1.73
COL28A1-202ENST00000430711 C14orf177Q52M58 125 aa4.23□□□□□ -1.73
COL28A1-202ENST00000430711 LINC00483Q53H64 154 aa4.23□□□□□ -1.73
COL28A1-202ENST00000430711 SPINK6Q6UWN8 80 aa4.23□□□□□ -1.73
COL28A1-202ENST00000430711 KIAA1109Q2LD37 5005 aa4.22□□□□□ -1.73
COL28A1-202ENST00000430711 VPS13BQ7Z7G8 4022 aa4.22□□□□□ -1.73
COL28A1-202ENST00000430711 NDUFS5O43920 106 aa4.22□□□□□ -1.73
COL28A1-202ENST00000430711 C1orf195Q5TG92 126 aa4.22□□□□□ -1.73
COL28A1-202ENST00000430711 PRR15LQ9BU68 103 aa4.22□□□□□ -1.73
COL28A1-202ENST00000430711 PKHD1P08F94 4074 aa4.22□□□□□ -1.73
COL28A1-202ENST00000430711 NDUFB1O75438 58 aa4.21□□□□□ -1.74
COL28A1-202ENST00000430711 A0A1B0GVX0 72 aa4.21□□□□□ -1.74
COL28A1-202ENST00000430711 SPANXA2-OT1Q8N9U9 137 aa4.21□□□□□ -1.74
COL28A1-202ENST00000430711 LCA10Q71F78 164 aa4.2□□□□□ -1.74
COL28A1-202ENST00000430711 UBR4Q5T4S7 5183 aa4.2□□□□□ -1.74
COL28A1-202ENST00000430711 IGLV7-46A0A075B6I9 117 aa4.2□□□□□ -1.74
COL28A1-202ENST00000430711 RETNLBQ9BQ08 111 aa4.2□□□□□ -1.74
COL28A1-202ENST00000430711 HRES1P13985 223 aa4.19□□□□□ -1.74
COL28A1-202ENST00000430711 SPAG11AQ6PDA7 123 aa4.19□□□□□ -1.74
COL28A1-202ENST00000430711 CHKB-CPT1BH3BT56 60 aa4.18□□□□□ -1.74
COL28A1-202ENST00000430711 KRTAP10-2P60368 255 aa4.18□□□□□ -1.74
COL28A1-202ENST00000430711 KRTAP13-3Q3SY46 172 aa4.18□□□□□ -1.74
COL28A1-202ENST00000430711 CIRBP-AS1Q8TBR5 109 aa4.18□□□□□ -1.74
COL28A1-202ENST00000430711 PLAC8Q9NZF1 115 aa4.18□□□□□ -1.74
COL28A1-202ENST00000430711 NUPR2A6NF83 97 aa4.17□□□□□ -1.74
COL28A1-202ENST00000430711 ZNF861PO60384 105 aa4.17□□□□□ -1.74
COL28A1-202ENST00000430711 MRPL34Q9BQ48 92 aaKnown RBP4.17□□□□□ -1.74
COL28A1-202ENST00000430711 H3BPC8 53 aa4.16□□□□□ -1.74
COL28A1-202ENST00000430711 PRR26Q8N8Z3 221 aa4.16□□□□□ -1.74
COL28A1-202ENST00000430711 SPINK7P58062 85 aa4.15□□□□□ -1.74
COL28A1-202ENST00000430711 KRTAP13-2Q52LG2 175 aa4.15□□□□□ -1.75
COL28A1-202ENST00000430711 IGLV7-43P04211 117 aa4.14□□□□□ -1.75
COL28A1-202ENST00000430711 SPTSSBQ8NFR3 76 aa4.13□□□□□ -1.75
COL28A1-202ENST00000430711 LOC101927531A0A1B0GV80 90 aa4.12□□□□□ -1.75
COL28A1-202ENST00000430711 Q75L30 129 aa4.12□□□□□ -1.75
COL28A1-202ENST00000430711 A6NED7 52 aa4.11□□□□□ -1.75
COL28A1-202ENST00000430711 LY6G6CO95867 125 aa4.11□□□□□ -1.75
COL28A1-202ENST00000430711 TP53AIP1Q9HCN2 124 aa4.11□□□□□ -1.75
COL28A1-202ENST00000430711 LIMD2Q9BT23 127 aa4.11□□□□□ -1.75
COL28A1-202ENST00000430711 CDK2AP2O75956 126 aa4.1□□□□□ -1.75
COL28A1-202ENST00000430711 PMAIP1Q13794 54 aa4.1□□□□□ -1.75
COL28A1-202ENST00000430711 FAT1Q14517 4588 aa4.1□□□□□ -1.75
COL28A1-202ENST00000430711 ZNF706Q9Y5V0 76 aaPredicted RBP4.1□□□□□ -1.75
COL28A1-202ENST00000430711 HERC1Q15751 4861 aa4.1□□□□□ -1.75
COL28A1-202ENST00000430711 KRTAP10-1P60331 282 aa4.1□□□□□ -1.75
COL28A1-202ENST00000430711 V9GYY9 64 aa4.1□□□□□ -1.75
COL28A1-202ENST00000430711 C1orf134Q5TEV5 83 aa4.09□□□□□ -1.75
COL28A1-202ENST00000430711 LINC01558Q9Y6Z2 57 aa4.09□□□□□ -1.75
COL28A1-202ENST00000430711 KRTAP16-1A8MUX0 517 aa4.07□□□□□ -1.76
COL28A1-202ENST00000430711 A6NN06 94 aa4.07□□□□□ -1.76
COL28A1-202ENST00000430711 KRTAP1-4P0C5Y4 121 aa4.07□□□□□ -1.76
COL28A1-202ENST00000430711 DYNC1H1Q14204 4646 aaKnown RBP4.07□□□□□ -1.76
COL28A1-202ENST00000430711 SEC61GP60059 68 aa4.05□□□□□ -1.76
COL28A1-202ENST00000430711 CDC42SE1Q9NRR8 79 aa4.04□□□□□ -1.76
COL28A1-202ENST00000430711 LINC00313P59037 77 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms