RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 KRTAP9-3Q9BYQ3 159 aa5.81□□□□□ -1.48
HDAC4-202ENST00000430200 UQCR10Q9UDW1 63 aa5.81□□□□□ -1.48
HDAC4-202ENST00000430200 COX6CP09669 75 aa5.79□□□□□ -1.48
HDAC4-202ENST00000430200 NAA38Q9BRA0 125 aaKnown RBP5.79□□□□□ -1.48
HDAC4-202ENST00000430200 H3BQ85 93 aa5.78□□□□□ -1.48
HDAC4-202ENST00000430200 RBM3P98179 157 aaKnown RBP5.77□□□□□ -1.49
HDAC4-202ENST00000430200 KRTAP9-7A8MTY7 169 aa5.76□□□□□ -1.49
HDAC4-202ENST00000430200 C8orf87E5RJ46 101 aa5.76□□□□□ -1.49
HDAC4-202ENST00000430200 ZCCHC13Q8WW36 166 aaKnown RBP5.76□□□□□ -1.49
HDAC4-202ENST00000430200 Q6ZQT0 140 aa5.75□□□□□ -1.49
HDAC4-202ENST00000430200 KRTAP19-1Q8IUB9 90 aa5.75□□□□□ -1.49
HDAC4-202ENST00000430200 RBM12B-AS1Q9P1G2 102 aa5.75□□□□□ -1.49
HDAC4-202ENST00000430200 BAALC-AS2P0C853 105 aa5.74□□□□□ -1.49
HDAC4-202ENST00000430200 DSCR8Q96T75 97 aa5.74□□□□□ -1.49
HDAC4-202ENST00000430200 SCGB1C2P0DMR2 95 aa5.73□□□□□ -1.49
HDAC4-202ENST00000430200 KRTAP10-10P60014 251 aa5.73□□□□□ -1.49
HDAC4-202ENST00000430200 Q8N9P0 234 aaPredicted RBP5.73□□□□□ -1.49
HDAC4-202ENST00000430200 SPINK7P58062 85 aa5.72□□□□□ -1.49
HDAC4-202ENST00000430200 IGKV3D-7A0A0C4DH55 119 aa5.71□□□□□ -1.5
HDAC4-202ENST00000430200 C9JAW5 83 aa5.71□□□□□ -1.5
HDAC4-202ENST00000430200 C8orf17Q9NRJ1 99 aa5.7□□□□□ -1.5
HDAC4-202ENST00000430200 LOC110117498A0A087WWA1 95 aa5.69□□□□□ -1.5
HDAC4-202ENST00000430200 J3KT08 172 aa5.69□□□□□ -1.5
HDAC4-202ENST00000430200 MACF1Q9UPN3 7388 aaKnown RBP5.69□□□□□ -1.5
HDAC4-202ENST00000430200 A8MWP4 228 aa5.68□□□□□ -1.5
HDAC4-202ENST00000430200 WFDC13Q8IUB5 93 aa5.68□□□□□ -1.5
HDAC4-202ENST00000430200 C14orf132Q9NPU4 83 aa5.68□□□□□ -1.5
HDAC4-202ENST00000430200 ATXN8Q156A1 80 aa5.66□□□□□ -1.5
HDAC4-202ENST00000430200 MMP24-AS1A0A0U1RRL7 71 aa5.65□□□□□ -1.5
HDAC4-202ENST00000430200 JMJD7-PLA2G4BH0Y9G9 81 aa5.63□□□□□ -1.51
HDAC4-202ENST00000430200 M0R143 59 aa5.63□□□□□ -1.51
HDAC4-202ENST00000430200 Q6ZVQ6 151 aa5.63□□□□□ -1.51
HDAC4-202ENST00000430200 NDUFB1O75438 58 aa5.62□□□□□ -1.51
HDAC4-202ENST00000430200 PRR15Q8IV56 129 aa5.62□□□□□ -1.51
HDAC4-202ENST00000430200 SYNE2Q8WXH0 6885 aaKnown RBP5.62□□□□□ -1.51
HDAC4-202ENST00000430200 K7EQZ3 153 aa5.61□□□□□ -1.51
HDAC4-202ENST00000430200 C21orf62-AS1Q17RA5 79 aa5.61□□□□□ -1.51
HDAC4-202ENST00000430200 MTURNQ8N3F0 131 aa5.61□□□□□ -1.51
HDAC4-202ENST00000430200 KRTAP19-6Q3LI70 58 aa5.6□□□□□ -1.51
HDAC4-202ENST00000430200 A0A1B0GW54 56 aa5.58□□□□□ -1.52
HDAC4-202ENST00000430200 MRPL34Q9BQ48 92 aaKnown RBP5.58□□□□□ -1.52
HDAC4-202ENST00000430200 SMIM6P0DI80 62 aa5.57□□□□□ -1.52
HDAC4-202ENST00000430200 LYRM7Q5U5X0 104 aa5.57□□□□□ -1.52
HDAC4-202ENST00000430200 TMEM254Q8TBM7 123 aa5.57□□□□□ -1.52
HDAC4-202ENST00000430200 PDE6GP18545 87 aa5.56□□□□□ -1.52
HDAC4-202ENST00000430200 BATFQ16520 125 aa5.56□□□□□ -1.52
HDAC4-202ENST00000430200 Q5W150 140 aa5.56□□□□□ -1.52
HDAC4-202ENST00000430200 NREPQ16612 68 aa5.55□□□□□ -1.52
HDAC4-202ENST00000430200 hDV103S1A0JD37 113 aa5.53□□□□□ -1.52
HDAC4-202ENST00000430200 TAX1BP3O14907 124 aa5.53□□□□□ -1.52
HDAC4-202ENST00000430200 Q8N9L7 120 aa5.53□□□□□ -1.52
HDAC4-202ENST00000430200 H3BT86 120 aa5.51□□□□□ -1.53
HDAC4-202ENST00000430200 H1FX-AS1Q4G0G2 97 aa5.51□□□□□ -1.53
HDAC4-202ENST00000430200 IGKV2D-30A0A075B6S6 120 aa5.5□□□□□ -1.53
HDAC4-202ENST00000430200 IGKV2-30P06310 120 aa5.5□□□□□ -1.53
HDAC4-202ENST00000430200 A0A1W2PPM0 123 aa5.49□□□□□ -1.53
HDAC4-202ENST00000430200 C9orf118A6NHY6 69 aa5.49□□□□□ -1.53
HDAC4-202ENST00000430200 NDUFS5O43920 106 aa5.49□□□□□ -1.53
HDAC4-202ENST00000430200 BPY2O14599 106 aa5.48□□□□□ -1.53
HDAC4-202ENST00000430200 SMCPP49901 116 aaPredicted RBP5.48□□□□□ -1.53
HDAC4-202ENST00000430200 TSTD3H0UI37 97 aa5.47□□□□□ -1.53
HDAC4-202ENST00000430200 C7orf65Q6ZTY9 151 aa5.46□□□□□ -1.54
HDAC4-202ENST00000430200 LOC105371267A0A1B0GV96 52 aa5.45□□□□□ -1.54
HDAC4-202ENST00000430200 HCG22E2RYF7 251 aa5.44□□□□□ -1.54
HDAC4-202ENST00000430200 C4orf26Q17RF5 130 aa5.44□□□□□ -1.54
HDAC4-202ENST00000430200 CASC2Q6XLA1 102 aa5.43□□□□□ -1.54
HDAC4-202ENST00000430200 KRTAP3-1Q9BYR8 98 aa5.43□□□□□ -1.54
HDAC4-202ENST00000430200 PRO0461Q9UI25 63 aa5.4□□□□□ -1.54
HDAC4-202ENST00000430200 LINC00846Q9NV44 126 aa5.39□□□□□ -1.55
HDAC4-202ENST00000430200 SPCS1Q9Y6A9 102 aa5.39□□□□□ -1.55
HDAC4-202ENST00000430200 MT1BP07438 61 aa5.38□□□□□ -1.55
HDAC4-202ENST00000430200 C5orf47Q569G3 176 aa5.37□□□□□ -1.55
HDAC4-202ENST00000430200 KRTAP6-3Q3LI67 103 aa5.35□□□□□ -1.55
HDAC4-202ENST00000430200 CXCL6P80162 114 aa5.34□□□□□ -1.55
HDAC4-202ENST00000430200 LCA10Q71F78 164 aa5.32□□□□□ -1.56
HDAC4-202ENST00000430200 K7EP34 96 aa5.3□□□□□ -1.56
HDAC4-202ENST00000430200 S4R3F8 94 aa5.3□□□□□ -1.56
HDAC4-202ENST00000430200 KRTAP19-8Q3LI54 63 aa5.29□□□□□ -1.56
HDAC4-202ENST00000430200 SPRR2GQ9BYE4 73 aa5.29□□□□□ -1.56
HDAC4-202ENST00000430200 NEBP20929 6669 aa5.29□□□□□ -1.56
HDAC4-202ENST00000430200 C1orf64Q8NEQ6 169 aa5.28□□□□□ -1.56
HDAC4-202ENST00000430200 KRTAP3-3Q9BYR6 98 aa5.28□□□□□ -1.56
HDAC4-202ENST00000430200 UBL5Q9BZL1 73 aa5.28□□□□□ -1.56
HDAC4-202ENST00000430200 MUC12Q9UKN1 5478 aa5.28□□□□□ -1.56
HDAC4-202ENST00000430200 A0A087WVE0 104 aa5.27□□□□□ -1.57
HDAC4-202ENST00000430200 FAM236AA0A1B0GUQ0 79 aa5.27□□□□□ -1.57
HDAC4-202ENST00000430200 FAM236BA0A1B0GV22 79 aa5.27□□□□□ -1.57
HDAC4-202ENST00000430200 COL5A1-AS1Q5SY13 56 aa5.25□□□□□ -1.57
HDAC4-202ENST00000430200 A6NN06 94 aa5.23□□□□□ -1.57
HDAC4-202ENST00000430200 Q5VV11 94 aa5.23□□□□□ -1.57
HDAC4-202ENST00000430200 KRTAP10-5P60370 271 aa5.22□□□□□ -1.57
HDAC4-202ENST00000430200 CSAG1Q6PB30 78 aa5.21□□□□□ -1.58
HDAC4-202ENST00000430200 KLKP1Q107X0 134 aa5.19□□□□□ -1.58
HDAC4-202ENST00000430200 ETDBQ3ZM63 59 aa5.19□□□□□ -1.58
HDAC4-202ENST00000430200 CYP4F30PQ9H0H9 118 aa5.18□□□□□ -1.58
HDAC4-202ENST00000430200 TP53AIP1Q9HCN2 124 aa5.17□□□□□ -1.58
HDAC4-202ENST00000430200 KMT2DO14686 5537 aa5.15□□□□□ -1.59
HDAC4-202ENST00000430200 TRAV22A0A0B4J277 110 aa5.13□□□□□ -1.59
HDAC4-202ENST00000430200 MDN1Q9NU22 5596 aa5.12□□□□□ -1.59
HDAC4-202ENST00000430200 F8W1H4 67 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms