RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 PKD1L1Q8TDX9 2849 aa7.59□□□□□ -1.19
CPNE4-201ENST00000429747 MIR22HGQ0VDD5 57 aa7.59□□□□□ -1.2
CPNE4-201ENST00000429747 PLAC8Q9NZF1 115 aa7.57□□□□□ -1.2
CPNE4-201ENST00000429747 SPINK7P58062 85 aa7.56□□□□□ -1.2
CPNE4-201ENST00000429747 A0A087X002 238 aa7.55□□□□□ -1.2
CPNE4-201ENST00000429747 NOTCH2NLQ7Z3S9 236 aa7.55□□□□□ -1.2
CPNE4-201ENST00000429747 Q8N1X5 172 aa7.55□□□□□ -1.2
CPNE4-201ENST00000429747 A8MU10 97 aa7.53□□□□□ -1.2
CPNE4-201ENST00000429747 ZFHX3Q15911 3703 aa7.53□□□□□ -1.2
CPNE4-201ENST00000429747 C9orf92A6NGG3 77 aa7.51□□□□□ -1.21
CPNE4-201ENST00000429747 Q6ZR54 194 aa7.51□□□□□ -1.21
CPNE4-201ENST00000429747 LINC00483Q53H64 154 aa7.5□□□□□ -1.21
CPNE4-201ENST00000429747 RBM12B-AS1Q9P1G2 102 aa7.5□□□□□ -1.21
CPNE4-201ENST00000429747 Q5W150 140 aa7.5□□□□□ -1.21
CPNE4-201ENST00000429747 SMR3BP02814 79 aaPredicted RBP7.5□□□□□ -1.21
CPNE4-201ENST00000429747 LINC00304Q8N9R0 145 aa7.49□□□□□ -1.21
CPNE4-201ENST00000429747 LCA10Q71F78 164 aa7.49□□□□□ -1.21
CPNE4-201ENST00000429747 Q6ZRN7 208 aaPredicted RBP7.45□□□□□ -1.22
CPNE4-201ENST00000429747 KRTAP13-1Q8IUC0 172 aa7.44□□□□□ -1.22
CPNE4-201ENST00000429747 PRAC1Q96KF2 57 aa7.44□□□□□ -1.22
CPNE4-201ENST00000429747 TRRAPQ9Y4A5 3859 aa7.4□□□□□ -1.22
CPNE4-201ENST00000429747 KRTAP10-2P60368 255 aa7.4□□□□□ -1.23
CPNE4-201ENST00000429747 DMBT1Q9UGM3 2413 aaPredicted RBP7.39□□□□□ -1.23
CPNE4-201ENST00000429747 TENM2Q9NT68 2774 aa7.39□□□□□ -1.23
CPNE4-201ENST00000429747 DMAC1Q96GE9 116 aa7.37□□□□□ -1.23
CPNE4-201ENST00000429747 KRTAP10-1P60331 282 aa7.34□□□□□ -1.24
CPNE4-201ENST00000429747 ANK3Q12955 4377 aaKnown RBP7.32□□□□□ -1.24
CPNE4-201ENST00000429747 TGP01266 2768 aa7.3□□□□□ -1.24
CPNE4-201ENST00000429747 SRRM2Q9UQ35 2752 aaKnown RBP7.3□□□□□ -1.24
CPNE4-201ENST00000429747 A6NN06 94 aa7.28□□□□□ -1.24
CPNE4-201ENST00000429747 ZNF469Q96JG9 3925 aaPredicted RBP7.28□□□□□ -1.24
CPNE4-201ENST00000429747 A0A1B0GU33 70 aa7.26□□□□□ -1.25
CPNE4-201ENST00000429747 LINC01554Q52M75 96 aa7.24□□□□□ -1.25
CPNE4-201ENST00000429747 KRTAP13-2Q52LG2 175 aa7.23□□□□□ -1.25
CPNE4-201ENST00000429747 A0A0D9SG42 100 aa7.23□□□□□ -1.25
CPNE4-201ENST00000429747 CSAG1Q6PB30 78 aa7.22□□□□□ -1.25
CPNE4-201ENST00000429747 ASB16-AS1Q495Z4 193 aa7.21□□□□□ -1.26
CPNE4-201ENST00000429747 FLG2Q5D862 2391 aaPredicted RBP7.19□□□□□ -1.26
CPNE4-201ENST00000429747 SPATA8Q6RVD6 105 aa7.17□□□□□ -1.26
CPNE4-201ENST00000429747 ADM2Q7Z4H4 148 aa7.17□□□□□ -1.26
CPNE4-201ENST00000429747 SPINT4Q6UDR6 99 aa7.16□□□□□ -1.26
CPNE4-201ENST00000429747 CRIPTQ9P021 101 aa7.12□□□□□ -1.27
CPNE4-201ENST00000429747 AKAP9Q99996 3911 aa7.08□□□□□ -1.28
CPNE4-201ENST00000429747 FBN3Q75N90 2809 aa7.07□□□□□ -1.28
CPNE4-201ENST00000429747 H1FX-AS1Q4G0G2 97 aa7.03□□□□□ -1.28
CPNE4-201ENST00000429747 COL7A1Q02388 2944 aa7□□□□□ -1.29
CPNE4-201ENST00000429747 KRTAP1-4P0C5Y4 121 aa6.98□□□□□ -1.29
CPNE4-201ENST00000429747 COX6B2Q6YFQ2 88 aa6.98□□□□□ -1.29
CPNE4-201ENST00000429747 KRTAP13-3Q3SY46 172 aa6.97□□□□□ -1.29
CPNE4-201ENST00000429747 CSMD3Q7Z407 3707 aa6.96□□□□□ -1.3
CPNE4-201ENST00000429747 H3BS24 57 aa6.95□□□□□ -1.3
CPNE4-201ENST00000429747 Q6ZSA8 131 aa6.94□□□□□ -1.3
CPNE4-201ENST00000429747 KRTAP16-1A8MUX0 517 aa6.94□□□□□ -1.3
CPNE4-201ENST00000429747 S4R3F8 94 aa6.94□□□□□ -1.3
CPNE4-201ENST00000429747 MEGF8Q7Z7M0 2845 aa6.93□□□□□ -1.3
CPNE4-201ENST00000429747 RPL37P61927 97 aaKnown RBP6.92□□□□□ -1.3
CPNE4-201ENST00000429747 RPS29P62273 56 aaKnown RBP6.9□□□□□ -1.3
CPNE4-201ENST00000429747 ROMO1P60602 79 aa6.87□□□□□ -1.31
CPNE4-201ENST00000429747 A8MUU9 505 aa6.85□□□□□ -1.31
CPNE4-201ENST00000429747 Q5VSD8 79 aa6.84□□□□□ -1.31
CPNE4-201ENST00000429747 KRTAP25-1Q3LHN0 102 aa6.84□□□□□ -1.31
CPNE4-201ENST00000429747 C20orf166-AS1Q96NR2 134 aa6.83□□□□□ -1.32
CPNE4-201ENST00000429747 H0YAA0 97 aa6.8□□□□□ -1.32
CPNE4-201ENST00000429747 J3QL48 77 aa6.78□□□□□ -1.32
CPNE4-201ENST00000429747 HUWE1Q7Z6Z7 4374 aaKnown RBP6.76□□□□□ -1.33
CPNE4-201ENST00000429747 R4GN34 69 aa6.7□□□□□ -1.34
CPNE4-201ENST00000429747 M0QZ58 72 aa6.66□□□□□ -1.34
CPNE4-201ENST00000429747 CAMK2N1Q7Z7J9 78 aa6.65□□□□□ -1.35
CPNE4-201ENST00000429747 DNAH10Q8IVF4 4471 aa6.61□□□□□ -1.35
CPNE4-201ENST00000429747 C10orf95Q9H7T3 257 aa6.57□□□□□ -1.36
CPNE4-201ENST00000429747 XP32Q5T750 250 aa6.56□□□□□ -1.36
CPNE4-201ENST00000429747 KRTAP3-1Q9BYR8 98 aa6.56□□□□□ -1.36
CPNE4-201ENST00000429747 SEC61BP60468 96 aaKnown RBP6.53□□□□□ -1.36
CPNE4-201ENST00000429747 LUZP6Q538Z0 58 aa6.52□□□□□ -1.37
CPNE4-201ENST00000429747 P0C880 135 aa6.52□□□□□ -1.37
CPNE4-201ENST00000429747 DNAH9Q9NYC9 4486 aa6.5□□□□□ -1.37
CPNE4-201ENST00000429747 PLECQ15149 4684 aaKnown RBP6.49□□□□□ -1.37
CPNE4-201ENST00000429747 NDUFAF8A1L188 74 aa6.48□□□□□ -1.37
CPNE4-201ENST00000429747 DNAH1Q9P2D7 4330 aa6.42□□□□□ -1.38
CPNE4-201ENST00000429747 A0A1B0GVY2 172 aa6.42□□□□□ -1.38
CPNE4-201ENST00000429747 ANK2Q01484 3957 aa6.39□□□□□ -1.39
CPNE4-201ENST00000429747 KRTAP21-3Q3LHN1 58 aa6.39□□□□□ -1.39
CPNE4-201ENST00000429747 KRTAP10-8P60410 259 aa6.38□□□□□ -1.39
CPNE4-201ENST00000429747 DNAH11Q96DT5 4516 aa6.36□□□□□ -1.39
CPNE4-201ENST00000429747 M0R2T5 61 aa6.33□□□□□ -1.4
CPNE4-201ENST00000429747 KRTAP13-4Q3LI77 160 aa6.33□□□□□ -1.4
CPNE4-201ENST00000429747 KRTAP10-6P60371 365 aaPredicted RBP6.31□□□□□ -1.4
CPNE4-201ENST00000429747 KRTAP12-2P59991 146 aa6.31□□□□□ -1.4
CPNE4-201ENST00000429747 STARD9Q9P2P6 4700 aa6.29□□□□□ -1.4
CPNE4-201ENST00000429747 TPRXLQ17RH7 258 aa6.28□□□□□ -1.4
CPNE4-201ENST00000429747 VPS13DQ5THJ4 4388 aa6.27□□□□□ -1.41
CPNE4-201ENST00000429747 DNAH8Q96JB1 4490 aa6.26□□□□□ -1.41
CPNE4-201ENST00000429747 LYSTQ99698 3801 aa6.24□□□□□ -1.41
CPNE4-201ENST00000429747 DNAH17Q9UFH2 4485 aa6.23□□□□□ -1.41
CPNE4-201ENST00000429747 A0A0A0MQY5 61 aa6.22□□□□□ -1.41
CPNE4-201ENST00000429747 KRTAP12-1P59990 96 aa6.22□□□□□ -1.41
CPNE4-201ENST00000429747 DNAH5Q8TE73 4624 aa6.2□□□□□ -1.42
CPNE4-201ENST00000429747 KRTAP10-4P60372 401 aaPredicted RBP6.2□□□□□ -1.42
CPNE4-201ENST00000429747 KRTAP3-3Q9BYR6 98 aa6.19□□□□□ -1.42
CPNE4-201ENST00000429747 LRP1BQ9NZR2 4599 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms