RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 SMCPP49901 116 aaPredicted RBP9.09□□□□□ -0.95
CTSD-203ENST00000429746 LINC00313P59037 77 aa9.08□□□□□ -0.96
CTSD-203ENST00000429746 A0A1B0GW54 56 aa9.07□□□□□ -0.96
CTSD-203ENST00000429746 PDE6GP18545 87 aa9.07□□□□□ -0.96
CTSD-203ENST00000429746 COL5A1-AS1Q5SY13 56 aa9.07□□□□□ -0.96
CTSD-203ENST00000429746 LCE2DQ5TA82 110 aaPredicted RBP9.07□□□□□ -0.96
CTSD-203ENST00000429746 KRTAP9-6A0A140TA67 174 aa9.06□□□□□ -0.96
CTSD-203ENST00000429746 C21orf62-AS1Q17RA5 79 aa9.06□□□□□ -0.96
CTSD-203ENST00000429746 SPCS1Q9Y6A9 102 aa9.06□□□□□ -0.96
CTSD-203ENST00000429746 A0A1B0GVX0 72 aa9.05□□□□□ -0.96
CTSD-203ENST00000429746 MT1HP80294 61 aa9.05□□□□□ -0.96
CTSD-203ENST00000429746 PRO0461Q9UI25 63 aa9.05□□□□□ -0.96
CTSD-203ENST00000429746 IGHV6-1A0A0B4J1U7 121 aa9.04□□□□□ -0.96
CTSD-203ENST00000429746 ATP11AUNQ6ZP68 121 aa9.04□□□□□ -0.96
CTSD-203ENST00000429746 J3KT08 172 aa9.01□□□□□ -0.97
CTSD-203ENST00000429746 K7EP34 96 aa8.99□□□□□ -0.97
CTSD-203ENST00000429746 IGKV3D-7A0A0C4DH55 119 aa8.98□□□□□ -0.97
CTSD-203ENST00000429746 C8orf87E5RJ46 101 aa8.98□□□□□ -0.97
CTSD-203ENST00000429746 PCP4L1A6NKN8 68 aa8.97□□□□□ -0.97
CTSD-203ENST00000429746 A8MWP4 228 aa8.96□□□□□ -0.98
CTSD-203ENST00000429746 COX6B2Q6YFQ2 88 aa8.92□□□□□ -0.98
CTSD-203ENST00000429746 C8orf17Q9NRJ1 99 aa8.92□□□□□ -0.98
CTSD-203ENST00000429746 NREPQ16612 68 aa8.91□□□□□ -0.98
CTSD-203ENST00000429746 Q8N9P0 234 aaPredicted RBP8.91□□□□□ -0.98
CTSD-203ENST00000429746 PRR15Q8IV56 129 aa8.9□□□□□ -0.98
CTSD-203ENST00000429746 LORP23490 312 aaPredicted RBP8.88□□□□□ -0.99
CTSD-203ENST00000429746 MMP24-AS1A0A0U1RRL7 71 aa8.87□□□□□ -0.99
CTSD-203ENST00000429746 NDUFB1O75438 58 aa8.87□□□□□ -0.99
CTSD-203ENST00000429746 KRTAP10-6P60371 365 aaPredicted RBP8.87□□□□□ -0.99
CTSD-203ENST00000429746 MPLKIPQ8TAP9 179 aa8.87□□□□□ -0.99
CTSD-203ENST00000429746 K7EQZ3 153 aa8.86□□□□□ -0.99
CTSD-203ENST00000429746 M0R2T5 61 aa8.86□□□□□ -0.99
CTSD-203ENST00000429746 HRES1P13985 223 aa8.85□□□□□ -0.99
CTSD-203ENST00000429746 Q6ZVQ6 151 aa8.85□□□□□ -0.99
CTSD-203ENST00000429746 ZCCHC13Q8WW36 166 aaKnown RBP8.83□□□□□ -1
CTSD-203ENST00000429746 CRCT1Q9UGL9 99 aa8.83□□□□□ -1
CTSD-203ENST00000429746 LINC00846Q9NV44 126 aa8.81□□□□□ -1
CTSD-203ENST00000429746 GTF2H5Q6ZYL4 71 aa8.8□□□□□ -1
CTSD-203ENST00000429746 F8W1H4 67 aa8.78□□□□□ -1
CTSD-203ENST00000429746 TMEM254Q8TBM7 123 aa8.78□□□□□ -1
CTSD-203ENST00000429746 BPY2O14599 106 aa8.77□□□□□ -1.01
CTSD-203ENST00000429746 Q8N9L7 120 aa8.77□□□□□ -1.01
CTSD-203ENST00000429746 ETDBQ3ZM63 59 aa8.76□□□□□ -1.01
CTSD-203ENST00000429746 MRPL34Q9BQ48 92 aaKnown RBP8.75□□□□□ -1.01
CTSD-203ENST00000429746 hDV103S1A0JD37 113 aa8.73□□□□□ -1.01
CTSD-203ENST00000429746 FSIP2Q5CZC0 6907 aa8.71□□□□□ -1.02
CTSD-203ENST00000429746 SPINK7P58062 85 aa8.71□□□□□ -1.02
CTSD-203ENST00000429746 UBL5Q9BZL1 73 aa8.67□□□□□ -1.02
CTSD-203ENST00000429746 Q5W150 140 aa8.66□□□□□ -1.02
CTSD-203ENST00000429746 WFDC13Q8IUB5 93 aa8.65□□□□□ -1.02
CTSD-203ENST00000429746 KRTAP9-8Q9BYQ0 159 aa8.63□□□□□ -1.03
CTSD-203ENST00000429746 CASC2Q6XLA1 102 aa8.62□□□□□ -1.03
CTSD-203ENST00000429746 RBM12B-AS1Q9P1G2 102 aa8.61□□□□□ -1.03
CTSD-203ENST00000429746 FAM236DA0A1B0GTK5 79 aa8.58□□□□□ -1.04
CTSD-203ENST00000429746 FAM236CP0DP71 79 aa8.58□□□□□ -1.04
CTSD-203ENST00000429746 HCG22E2RYF7 251 aa8.57□□□□□ -1.04
CTSD-203ENST00000429746 NDUFS5O43920 106 aa8.57□□□□□ -1.04
CTSD-203ENST00000429746 CXCL6P80162 114 aa8.57□□□□□ -1.04
CTSD-203ENST00000429746 A0A1B0GV90 55 aa8.56□□□□□ -1.04
CTSD-203ENST00000429746 FAM240AA0A1B0GVK7 77 aa8.52□□□□□ -1.05
CTSD-203ENST00000429746 MT2AP02795 61 aa8.5□□□□□ -1.05
CTSD-203ENST00000429746 ACYP1P07311 99 aa8.48□□□□□ -1.05
CTSD-203ENST00000429746 IGKV2D-30A0A075B6S6 120 aa8.47□□□□□ -1.05
CTSD-203ENST00000429746 IGKV2-30P06310 120 aa8.47□□□□□ -1.05
CTSD-203ENST00000429746 C7orf65Q6ZTY9 151 aa8.46□□□□□ -1.06
CTSD-203ENST00000429746 MT1FP04733 61 aa8.44□□□□□ -1.06
CTSD-203ENST00000429746 USH2AO75445 5202 aa8.39□□□□□ -1.07
CTSD-203ENST00000429746 H1FX-AS1Q4G0G2 97 aa8.37□□□□□ -1.07
CTSD-203ENST00000429746 ATP5EP2Q5VTU8 51 aa8.37□□□□□ -1.07
CTSD-203ENST00000429746 KRTAP3-1Q9BYR8 98 aa8.37□□□□□ -1.07
CTSD-203ENST00000429746 TP53AIP1Q9HCN2 124 aa8.37□□□□□ -1.07
CTSD-203ENST00000429746 C4orf26Q17RF5 130 aa8.35□□□□□ -1.07
CTSD-203ENST00000429746 KRTAP9-3Q9BYQ3 159 aa8.35□□□□□ -1.07
CTSD-203ENST00000429746 LINC00643Q86TS7 51 aa8.32□□□□□ -1.08
CTSD-203ENST00000429746 SSPOA2VEC9 5147 aa8.31□□□□□ -1.08
CTSD-203ENST00000429746 A0A087WVE0 104 aa8.29□□□□□ -1.08
CTSD-203ENST00000429746 KRTAP10-10P60014 251 aa8.29□□□□□ -1.08
CTSD-203ENST00000429746 LCE2BO14633 110 aa8.28□□□□□ -1.08
CTSD-203ENST00000429746 HIST1H4AP62805 103 aaKnown RBP8.26□□□□□ -1.09
CTSD-203ENST00000429746 CYP4F30PQ9H0H9 118 aa8.24□□□□□ -1.09
CTSD-203ENST00000429746 TRAV22A0A0B4J277 110 aa8.23□□□□□ -1.09
CTSD-203ENST00000429746 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.2□□□□□ -1.1
CTSD-203ENST00000429746 C1orf64Q8NEQ6 169 aa8.19□□□□□ -1.1
CTSD-203ENST00000429746 UQCRQO14949 82 aa8.17□□□□□ -1.1
CTSD-203ENST00000429746 LOC101927531A0A1B0GV80 90 aa8.16□□□□□ -1.1
CTSD-203ENST00000429746 OCR1Q9BZK8 76 aa8.15□□□□□ -1.1
CTSD-203ENST00000429746 KRTAP9-7A8MTY7 169 aa8.14□□□□□ -1.11
CTSD-203ENST00000429746 H0Y9P7 68 aa8.13□□□□□ -1.11
CTSD-203ENST00000429746 J3QR89 54 aa8.12□□□□□ -1.11
CTSD-203ENST00000429746 LCA10Q71F78 164 aa8.12□□□□□ -1.11
CTSD-203ENST00000429746 KRTAP19-1Q8IUB9 90 aa8.12□□□□□ -1.11
CTSD-203ENST00000429746 KRTAP3-3Q9BYR6 98 aa8.12□□□□□ -1.11
CTSD-203ENST00000429746 S4R3F8 94 aa8.09□□□□□ -1.11
CTSD-203ENST00000429746 C5orf47Q569G3 176 aa8.08□□□□□ -1.12
CTSD-203ENST00000429746 ATOX1O00244 68 aa8.07□□□□□ -1.12
CTSD-203ENST00000429746 FCGBPQ9Y6R7 5405 aaPredicted RBP8.06□□□□□ -1.12
CTSD-203ENST00000429746 KLKP1Q107X0 134 aa8.03□□□□□ -1.12
CTSD-203ENST00000429746 KRTAP19-6Q3LI70 58 aa8.01□□□□□ -1.13
CTSD-203ENST00000429746 LINC00208Q96KT6 92 aa8.01□□□□□ -1.13
CTSD-203ENST00000429746 MT-ATP8P03928 68 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 192.9 ms