RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 CYP4F30PQ9H0H9 118 aa9.96□□□□□ -0.82
SMARCA4-203ENST00000429416 PKD1L1Q8TDX9 2849 aa9.96□□□□□ -0.82
SMARCA4-203ENST00000429416 LAMA5O15230 3695 aa9.94□□□□□ -0.82
SMARCA4-203ENST00000429416 CRIPTQ9P021 101 aa9.91□□□□□ -0.82
SMARCA4-203ENST00000429416 KRTAP7-1Q8IUC3 87 aa9.9□□□□□ -0.83
SMARCA4-203ENST00000429416 ASPMQ8IZT6 3477 aa9.84□□□□□ -0.83
SMARCA4-203ENST00000429416 CELSR1Q9NYQ6 3014 aa9.84□□□□□ -0.83
SMARCA4-203ENST00000429416 R4GN34 69 aa9.84□□□□□ -0.83
SMARCA4-203ENST00000429416 KRTAP13-2Q52LG2 175 aa9.84□□□□□ -0.83
SMARCA4-203ENST00000429416 A0A1B0GU33 70 aa9.81□□□□□ -0.84
SMARCA4-203ENST00000429416 WDFY3Q8IZQ1 3526 aa9.81□□□□□ -0.84
SMARCA4-203ENST00000429416 PRO0628Q9UI54 55 aa9.8□□□□□ -0.84
SMARCA4-203ENST00000429416 NBPF19A0A087WUL8 3843 aa9.76□□□□□ -0.85
SMARCA4-203ENST00000429416 CDC42SE1Q9NRR8 79 aa9.76□□□□□ -0.85
SMARCA4-203ENST00000429416 RPS29P62273 56 aaKnown RBP9.75□□□□□ -0.85
SMARCA4-203ENST00000429416 PDZD2O15018 2839 aa9.75□□□□□ -0.85
SMARCA4-203ENST00000429416 ZFHX3Q15911 3703 aa9.74□□□□□ -0.85
SMARCA4-203ENST00000429416 NOTCH2NLQ7Z3S9 236 aa9.73□□□□□ -0.85
SMARCA4-203ENST00000429416 DMDP11532 3685 aa9.73□□□□□ -0.85
SMARCA4-203ENST00000429416 KRTAP13-1Q8IUC0 172 aa9.72□□□□□ -0.85
SMARCA4-203ENST00000429416 OTOGQ6ZRI0 2925 aa9.69□□□□□ -0.86
SMARCA4-203ENST00000429416 VWFP04275 2813 aa9.69□□□□□ -0.86
SMARCA4-203ENST00000429416 FBN1P35555 2871 aaKnown RBP9.64□□□□□ -0.87
SMARCA4-203ENST00000429416 M0QZ58 72 aa9.64□□□□□ -0.87
SMARCA4-203ENST00000429416 ASB16-AS1Q495Z4 193 aa9.64□□□□□ -0.87
SMARCA4-203ENST00000429416 LCA10Q71F78 164 aa9.62□□□□□ -0.87
SMARCA4-203ENST00000429416 Q75L30 129 aa9.59□□□□□ -0.87
SMARCA4-203ENST00000429416 RPL37P61927 97 aaKnown RBP9.58□□□□□ -0.88
SMARCA4-203ENST00000429416 DMAC1Q96GE9 116 aa9.58□□□□□ -0.88
SMARCA4-203ENST00000429416 ZFHX4Q86UP3 3567 aa9.57□□□□□ -0.88
SMARCA4-203ENST00000429416 ADM2Q7Z4H4 148 aa9.56□□□□□ -0.88
SMARCA4-203ENST00000429416 KRTAP29-1A8MX34 341 aaPredicted RBP9.55□□□□□ -0.88
SMARCA4-203ENST00000429416 H1FX-AS1Q4G0G2 97 aa9.54□□□□□ -0.88
SMARCA4-203ENST00000429416 Q5XG85 94 aa9.53□□□□□ -0.88
SMARCA4-203ENST00000429416 SMG1Q96Q15 3661 aaKnown RBP9.53□□□□□ -0.88
SMARCA4-203ENST00000429416 PLAC4Q8WY50 150 aa9.53□□□□□ -0.88
SMARCA4-203ENST00000429416 C20orf166-AS1Q96NR2 134 aa9.53□□□□□ -0.88
SMARCA4-203ENST00000429416 TGP01266 2768 aa9.5□□□□□ -0.89
SMARCA4-203ENST00000429416 KRTAP1-4P0C5Y4 121 aa9.47□□□□□ -0.89
SMARCA4-203ENST00000429416 Q1T7F1 81 aa9.46□□□□□ -0.89
SMARCA4-203ENST00000429416 LINC01558Q9Y6Z2 57 aa9.45□□□□□ -0.9
SMARCA4-203ENST00000429416 CYSTM1Q9H1C7 97 aa9.43□□□□□ -0.9
SMARCA4-203ENST00000429416 A0A1B0GVY2 172 aa9.37□□□□□ -0.91
SMARCA4-203ENST00000429416 SRRM2Q9UQ35 2752 aaKnown RBP9.35□□□□□ -0.91
SMARCA4-203ENST00000429416 XP32Q5T750 250 aa9.34□□□□□ -0.92
SMARCA4-203ENST00000429416 CSMD2Q7Z408 3487 aa9.33□□□□□ -0.92
SMARCA4-203ENST00000429416 A8MUU9 505 aa9.33□□□□□ -0.92
SMARCA4-203ENST00000429416 CSMD1Q96PZ7 3565 aa9.33□□□□□ -0.92
SMARCA4-203ENST00000429416 SPATA8Q6RVD6 105 aa9.32□□□□□ -0.92
SMARCA4-203ENST00000429416 TPRXLQ17RH7 258 aa9.25□□□□□ -0.93
SMARCA4-203ENST00000429416 KTN1-AS1Q86SY8 53 aa9.21□□□□□ -0.93
SMARCA4-203ENST00000429416 LUZP6Q538Z0 58 aa9.21□□□□□ -0.94
SMARCA4-203ENST00000429416 Q5VV11 94 aa9.19□□□□□ -0.94
SMARCA4-203ENST00000429416 KRTAP10-8P60410 259 aa9.09□□□□□ -0.95
SMARCA4-203ENST00000429416 KRTAP13-3Q3SY46 172 aa9.08□□□□□ -0.96
SMARCA4-203ENST00000429416 ANK3Q12955 4377 aaKnown RBP9.07□□□□□ -0.96
SMARCA4-203ENST00000429416 ROMO1P60602 79 aa9.06□□□□□ -0.96
SMARCA4-203ENST00000429416 SPENQ96T58 3664 aaKnown RBP9.05□□□□□ -0.96
SMARCA4-203ENST00000429416 SVEP1Q4LDE5 3571 aa9.04□□□□□ -0.96
SMARCA4-203ENST00000429416 A8MU10 97 aa9.02□□□□□ -0.97
SMARCA4-203ENST00000429416 KRTAP10-10P60014 251 aa9.01□□□□□ -0.97
SMARCA4-203ENST00000429416 PRAC1Q96KF2 57 aa9□□□□□ -0.97
SMARCA4-203ENST00000429416 FBN3Q75N90 2809 aa8.98□□□□□ -0.97
SMARCA4-203ENST00000429416 TRRAPQ9Y4A5 3859 aa8.97□□□□□ -0.97
SMARCA4-203ENST00000429416 CUBNO60494 3623 aa8.97□□□□□ -0.97
SMARCA4-203ENST00000429416 H3BS24 57 aa8.95□□□□□ -0.98
SMARCA4-203ENST00000429416 COL7A1Q02388 2944 aa8.85□□□□□ -0.99
SMARCA4-203ENST00000429416 KRTAP16-1A8MUX0 517 aa8.85□□□□□ -0.99
SMARCA4-203ENST00000429416 BSNQ9UPA5 3926 aa8.79□□□□□ -1
SMARCA4-203ENST00000429416 TNP1P09430 55 aa8.78□□□□□ -1
SMARCA4-203ENST00000429416 MEGF8Q7Z7M0 2845 aa8.7□□□□□ -1.02
SMARCA4-203ENST00000429416 KRTAP4-5Q9BYR2 181 aa8.6□□□□□ -1.03
SMARCA4-203ENST00000429416 PRO2289Q9P1D8 64 aa8.6□□□□□ -1.03
SMARCA4-203ENST00000429416 P0C880 135 aa8.54□□□□□ -1.04
SMARCA4-203ENST00000429416 MT1HL1P0DM35 61 aa8.51□□□□□ -1.05
SMARCA4-203ENST00000429416 HUWE1Q7Z6Z7 4374 aaKnown RBP8.42□□□□□ -1.06
SMARCA4-203ENST00000429416 KRTAP25-1Q3LHN0 102 aa8.39□□□□□ -1.07
SMARCA4-203ENST00000429416 A0A0A0MQY5 61 aa8.37□□□□□ -1.07
SMARCA4-203ENST00000429416 VPS13CQ709C8 3753 aa8.35□□□□□ -1.07
SMARCA4-203ENST00000429416 H0YAA0 97 aa8.35□□□□□ -1.07
SMARCA4-203ENST00000429416 C10orf95Q9H7T3 257 aa8.32□□□□□ -1.08
SMARCA4-203ENST00000429416 A6NN06 94 aa8.31□□□□□ -1.08
SMARCA4-203ENST00000429416 ZNF469Q96JG9 3925 aaPredicted RBP8.3□□□□□ -1.08
SMARCA4-203ENST00000429416 DNHD1Q96M86 4753 aa8.28□□□□□ -1.08
SMARCA4-203ENST00000429416 KRTAP10-4P60372 401 aaPredicted RBP8.27□□□□□ -1.09
SMARCA4-203ENST00000429416 PP632Q6XCG6 107 aa8.25□□□□□ -1.09
SMARCA4-203ENST00000429416 AKAP9Q99996 3911 aa8.24□□□□□ -1.09
SMARCA4-203ENST00000429416 KRTAP3-1Q9BYR8 98 aa8.14□□□□□ -1.11
SMARCA4-203ENST00000429416 DNAH9Q9NYC9 4486 aa8.13□□□□□ -1.11
SMARCA4-203ENST00000429416 ALMS1Q8TCU4 4167 aa8.1□□□□□ -1.11
SMARCA4-203ENST00000429416 KRTAP12-2P59991 146 aa8.02□□□□□ -1.13
SMARCA4-203ENST00000429416 CSMD3Q7Z407 3707 aa8.02□□□□□ -1.13
SMARCA4-203ENST00000429416 DNAH5Q8TE73 4624 aa7.98□□□□□ -1.13
SMARCA4-203ENST00000429416 NDUFAF8A1L188 74 aa7.92□□□□□ -1.14
SMARCA4-203ENST00000429416 KRTAP12-1P59990 96 aa7.88□□□□□ -1.15
SMARCA4-203ENST00000429416 KRTAP13-4Q3LI77 160 aa7.83□□□□□ -1.16
SMARCA4-203ENST00000429416 PLECQ15149 4684 aaKnown RBP7.82□□□□□ -1.16
SMARCA4-203ENST00000429416 KRTAP10-6P60371 365 aaPredicted RBP7.76□□□□□ -1.17
SMARCA4-203ENST00000429416 DNAH11Q96DT5 4516 aa7.75□□□□□ -1.17
SMARCA4-203ENST00000429416 DNAH1Q9P2D7 4330 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms