RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 SPINK6Q6UWN8 80 aa5.59□□□□□ -1.51
HMGCLL1-206ENST00000428842 IGFL1Q6UW32 110 aa5.58□□□□□ -1.52
HMGCLL1-206ENST00000428842 F8WEM9 126 aa5.58□□□□□ -1.52
HMGCLL1-206ENST00000428842 SERP1Q9Y6X1 66 aa5.58□□□□□ -1.52
HMGCLL1-206ENST00000428842 TMEM254Q8TBM7 123 aa5.57□□□□□ -1.52
HMGCLL1-206ENST00000428842 LINC00483Q53H64 154 aa5.57□□□□□ -1.52
HMGCLL1-206ENST00000428842 Q5XG85 94 aa5.57□□□□□ -1.52
HMGCLL1-206ENST00000428842 DEFB116Q30KQ4 102 aa5.56□□□□□ -1.52
HMGCLL1-206ENST00000428842 LPAP08519 4548 aa5.56□□□□□ -1.52
HMGCLL1-206ENST00000428842 A0A0U1RQV1 116 aa5.55□□□□□ -1.52
HMGCLL1-206ENST00000428842 ATP5EP56381 51 aaPredicted RBP5.55□□□□□ -1.52
HMGCLL1-206ENST00000428842 DSCR10P59022 87 aa5.55□□□□□ -1.52
HMGCLL1-206ENST00000428842 IGLV8-61A0A075B6I0 122 aa5.54□□□□□ -1.52
HMGCLL1-206ENST00000428842 SPRR1BP22528 89 aa5.54□□□□□ -1.52
HMGCLL1-206ENST00000428842 TYMSOSQ8TAI1 123 aa5.54□□□□□ -1.52
HMGCLL1-206ENST00000428842 C5orf47Q569G3 176 aa5.53□□□□□ -1.52
HMGCLL1-206ENST00000428842 RETNLBQ9BQ08 111 aa5.53□□□□□ -1.52
HMGCLL1-206ENST00000428842 ZNF706Q9Y5V0 76 aaPredicted RBP5.53□□□□□ -1.52
HMGCLL1-206ENST00000428842 C4orf26Q17RF5 130 aa5.52□□□□□ -1.53
HMGCLL1-206ENST00000428842 K7EQZ3 153 aa5.51□□□□□ -1.53
HMGCLL1-206ENST00000428842 MT1HL1P0DM35 61 aa5.51□□□□□ -1.53
HMGCLL1-206ENST00000428842 A0A087WSZ3 146 aa5.5□□□□□ -1.53
HMGCLL1-206ENST00000428842 H3BS24 57 aa5.5□□□□□ -1.53
HMGCLL1-206ENST00000428842 SMIM26A0A096LP01 95 aa5.48□□□□□ -1.53
HMGCLL1-206ENST00000428842 LRP2P98164 4655 aa5.48□□□□□ -1.53
HMGCLL1-206ENST00000428842 HCG22E2RYF7 251 aa5.47□□□□□ -1.53
HMGCLL1-206ENST00000428842 ZCCHC13Q8WW36 166 aaKnown RBP5.47□□□□□ -1.53
HMGCLL1-206ENST00000428842 FP248Q71RG6 208 aaPredicted RBP5.47□□□□□ -1.53
HMGCLL1-206ENST00000428842 KRTAP10-8P60410 259 aa5.46□□□□□ -1.53
HMGCLL1-206ENST00000428842 MUC2Q02817 5179 aa5.45□□□□□ -1.54
HMGCLL1-206ENST00000428842 FAM229BQ4G0N7 80 aa5.45□□□□□ -1.54
HMGCLL1-206ENST00000428842 LINC00304Q8N9R0 145 aa5.45□□□□□ -1.54
HMGCLL1-206ENST00000428842 RNF213Q63HN8 5207 aa5.42□□□□□ -1.54
HMGCLL1-206ENST00000428842 KRTAP29-1A8MX34 341 aaPredicted RBP5.42□□□□□ -1.54
HMGCLL1-206ENST00000428842 LINC00472Q9H8W2 130 aa5.42□□□□□ -1.54
HMGCLL1-206ENST00000428842 UBR4Q5T4S7 5183 aa5.41□□□□□ -1.54
HMGCLL1-206ENST00000428842 SSBP3-AS1Q7Z2R9 100 aa5.41□□□□□ -1.54
HMGCLL1-206ENST00000428842 WFDC13Q8IUB5 93 aa5.39□□□□□ -1.55
HMGCLL1-206ENST00000428842 PRR15Q8IV56 129 aa5.39□□□□□ -1.55
HMGCLL1-206ENST00000428842 Q96NJ1 140 aa5.39□□□□□ -1.55
HMGCLL1-206ENST00000428842 HMCN2Q8NDA2 5059 aa5.39□□□□□ -1.55
HMGCLL1-206ENST00000428842 A8MWP4 228 aa5.39□□□□□ -1.55
HMGCLL1-206ENST00000428842 hDV103S1A0JD37 113 aa5.38□□□□□ -1.55
HMGCLL1-206ENST00000428842 NOTCH2NLQ7Z3S9 236 aa5.38□□□□□ -1.55
HMGCLL1-206ENST00000428842 CYP4F30PQ9H0H9 118 aa5.38□□□□□ -1.55
HMGCLL1-206ENST00000428842 C1orf195Q5TG92 126 aa5.37□□□□□ -1.55
HMGCLL1-206ENST00000428842 CASC2Q6XLA1 102 aa5.37□□□□□ -1.55
HMGCLL1-206ENST00000428842 NDUFB1O75438 58 aa5.36□□□□□ -1.55
HMGCLL1-206ENST00000428842 MP68P56378 58 aa5.36□□□□□ -1.55
HMGCLL1-206ENST00000428842 TRAV22A0A0B4J277 110 aa5.35□□□□□ -1.55
HMGCLL1-206ENST00000428842 H3BPC8 53 aa5.35□□□□□ -1.55
HMGCLL1-206ENST00000428842 C1orf64Q8NEQ6 169 aa5.35□□□□□ -1.55
HMGCLL1-206ENST00000428842 C9orf92A6NGG3 77 aa5.35□□□□□ -1.55
HMGCLL1-206ENST00000428842 SPINK1P00995 79 aa5.34□□□□□ -1.55
HMGCLL1-206ENST00000428842 MMP24-AS1A0A0U1RRL7 71 aa5.34□□□□□ -1.56
HMGCLL1-206ENST00000428842 H0Y9P7 68 aa5.33□□□□□ -1.56
HMGCLL1-206ENST00000428842 PRR4Q16378 134 aa5.33□□□□□ -1.56
HMGCLL1-206ENST00000428842 LINC00208Q96KT6 92 aa5.33□□□□□ -1.56
HMGCLL1-206ENST00000428842 MPLKIPQ8TAP9 179 aa5.32□□□□□ -1.56
HMGCLL1-206ENST00000428842 PRO0628Q9UI54 55 aa5.32□□□□□ -1.56
HMGCLL1-206ENST00000428842 IGHV6-1A0A0B4J1U7 121 aa5.32□□□□□ -1.56
HMGCLL1-206ENST00000428842 ASB16-AS1Q495Z4 193 aa5.32□□□□□ -1.56
HMGCLL1-206ENST00000428842 SPANXA2-OT1Q8N9U9 137 aa5.31□□□□□ -1.56
HMGCLL1-206ENST00000428842 Q1T7F1 81 aa5.31□□□□□ -1.56
HMGCLL1-206ENST00000428842 CD164Q04900 197 aa5.3□□□□□ -1.56
HMGCLL1-206ENST00000428842 SPAG11AQ6PDA7 123 aa5.27□□□□□ -1.57
HMGCLL1-206ENST00000428842 LIMD2Q9BT23 127 aa5.27□□□□□ -1.57
HMGCLL1-206ENST00000428842 C8orf17Q9NRJ1 99 aa5.26□□□□□ -1.57
HMGCLL1-206ENST00000428842 TP53AIP1Q9HCN2 124 aa5.26□□□□□ -1.57
HMGCLL1-206ENST00000428842 A0A1B0GVX0 72 aa5.25□□□□□ -1.57
HMGCLL1-206ENST00000428842 IGLV7-46A0A075B6I9 117 aa5.24□□□□□ -1.57
HMGCLL1-206ENST00000428842 BRK1Q8WUW1 75 aa5.24□□□□□ -1.57
HMGCLL1-206ENST00000428842 V9GYY9 64 aa5.22□□□□□ -1.57
HMGCLL1-206ENST00000428842 MRPL34Q9BQ48 92 aaKnown RBP5.21□□□□□ -1.58
HMGCLL1-206ENST00000428842 RPS29P62273 56 aaKnown RBP5.19□□□□□ -1.58
HMGCLL1-206ENST00000428842 PSPHP1O15172 72 aa5.18□□□□□ -1.58
HMGCLL1-206ENST00000428842 LINC00313P59037 77 aa5.18□□□□□ -1.58
HMGCLL1-206ENST00000428842 Q8N9P0 234 aaPredicted RBP5.18□□□□□ -1.58
HMGCLL1-206ENST00000428842 KRTAP13-3Q3SY46 172 aa5.17□□□□□ -1.58
HMGCLL1-206ENST00000428842 PCOTHQ58A44 107 aa5.17□□□□□ -1.58
HMGCLL1-206ENST00000428842 COA5Q86WW8 74 aa5.17□□□□□ -1.58
HMGCLL1-206ENST00000428842 KRTAP16-1A8MUX0 517 aa5.16□□□□□ -1.58
HMGCLL1-206ENST00000428842 NDUFS5O43920 106 aa5.16□□□□□ -1.58
HMGCLL1-206ENST00000428842 FAT4Q6V0I7 4981 aa5.16□□□□□ -1.58
HMGCLL1-206ENST00000428842 A0A0A0MQY5 61 aa5.16□□□□□ -1.58
HMGCLL1-206ENST00000428842 A8MUN3 132 aa5.16□□□□□ -1.58
HMGCLL1-206ENST00000428842 XP32Q5T750 250 aa5.15□□□□□ -1.58
HMGCLL1-206ENST00000428842 Q5VV11 94 aa5.15□□□□□ -1.58
HMGCLL1-206ENST00000428842 LOC101927531A0A1B0GV80 90 aa5.13□□□□□ -1.59
HMGCLL1-206ENST00000428842 C8orf87E5RJ46 101 aa5.12□□□□□ -1.59
HMGCLL1-206ENST00000428842 Q5W150 140 aa5.12□□□□□ -1.59
HMGCLL1-206ENST00000428842 LCE2BO14633 110 aa5.12□□□□□ -1.59
HMGCLL1-206ENST00000428842 LCE2CQ5TA81 110 aa5.11□□□□□ -1.59
HMGCLL1-206ENST00000428842 HRES1P13985 223 aa5.09□□□□□ -1.59
HMGCLL1-206ENST00000428842 PRR15LQ9BU68 103 aa5.09□□□□□ -1.59
HMGCLL1-206ENST00000428842 Q75L30 129 aa5.09□□□□□ -1.59
HMGCLL1-206ENST00000428842 TPRXLQ17RH7 258 aa5.08□□□□□ -1.6
HMGCLL1-206ENST00000428842 LINC01558Q9Y6Z2 57 aa5.08□□□□□ -1.6
HMGCLL1-206ENST00000428842 MUC17Q685J3 4493 aa5.07□□□□□ -1.6
HMGCLL1-206ENST00000428842 CHKB-CPT1BH3BT56 60 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms