RNA–Protein interactions for RNA: ENST00000427183.6

HDLBP-214, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2 BASIC

Gene HDLBP, Length 6,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-214ENST00000427183 DCHS2Q6V1P9 2916 aa7.33□□□□□ -1.24
HDLBP-214ENST00000427183 TEP1Q99973 2627 aaKnown RBP7.31□□□□□ -1.24
HDLBP-214ENST00000427183 CHD6Q8TD26 2715 aa7.31□□□□□ -1.24
HDLBP-214ENST00000427183 DMBT1Q9UGM3 2413 aaPredicted RBP7.31□□□□□ -1.24
HDLBP-214ENST00000427183 ASB16-AS1Q495Z4 193 aa7.31□□□□□ -1.24
HDLBP-214ENST00000427183 UTP20O75691 2785 aaKnown RBP7.3□□□□□ -1.24
HDLBP-214ENST00000427183 A0A087X002 238 aa7.3□□□□□ -1.24
HDLBP-214ENST00000427183 NOTCH2NLQ7Z3S9 236 aa7.3□□□□□ -1.24
HDLBP-214ENST00000427183 DCHS1Q96JQ0 3298 aa7.27□□□□□ -1.25
HDLBP-214ENST00000427183 KRTAP29-1A8MX34 341 aaPredicted RBP7.26□□□□□ -1.25
HDLBP-214ENST00000427183 A6NN06 94 aa7.25□□□□□ -1.25
HDLBP-214ENST00000427183 SETXQ7Z333 2677 aaKnown RBP7.24□□□□□ -1.25
HDLBP-214ENST00000427183 UNC79Q9P2D8 2635 aa7.24□□□□□ -1.25
HDLBP-214ENST00000427183 UBR5O95071 2799 aaPredicted RBP7.23□□□□□ -1.25
HDLBP-214ENST00000427183 A8MUU9 505 aa7.23□□□□□ -1.25
HDLBP-214ENST00000427183 STAB1Q9NY15 2570 aa7.22□□□□□ -1.25
HDLBP-214ENST00000427183 C10orf95Q9H7T3 257 aa7.21□□□□□ -1.26
HDLBP-214ENST00000427183 CSMD1Q96PZ7 3565 aa7.2□□□□□ -1.26
HDLBP-214ENST00000427183 NBEAL1Q6ZS30 2694 aa7.19□□□□□ -1.26
HDLBP-214ENST00000427183 ZANQ9Y493 2812 aa7.19□□□□□ -1.26
HDLBP-214ENST00000427183 GCN1Q92616 2671 aaKnown RBP7.19□□□□□ -1.26
HDLBP-214ENST00000427183 APCP25054 2843 aa7.18□□□□□ -1.26
HDLBP-214ENST00000427183 KRTAP4-16G5E9R7 235 aaPredicted RBP7.17□□□□□ -1.26
HDLBP-214ENST00000427183 ASH1LQ9NR48 2969 aaKnown RBP7.16□□□□□ -1.26
HDLBP-214ENST00000427183 STAB2Q8WWQ8 2551 aa7.15□□□□□ -1.27
HDLBP-214ENST00000427183 LCE6AA0A183 80 aa7.14□□□□□ -1.27
HDLBP-214ENST00000427183 FBN2P35556 2912 aa7.13□□□□□ -1.27
HDLBP-214ENST00000427183 CRYBG3Q68DQ2 2970 aa7.11□□□□□ -1.27
HDLBP-214ENST00000427183 SVEP1Q4LDE5 3571 aa7.1□□□□□ -1.27
HDLBP-214ENST00000427183 COL6A5A8TX70 2615 aa7.09□□□□□ -1.27
HDLBP-214ENST00000427183 KRTAP11-1Q8IUC1 163 aa7.08□□□□□ -1.28
HDLBP-214ENST00000427183 MXRA5Q9NR99 2828 aa7.08□□□□□ -1.28
HDLBP-214ENST00000427183 CELSR2Q9HCU4 2923 aa7.08□□□□□ -1.28
HDLBP-214ENST00000427183 TNP1P09430 55 aa7.07□□□□□ -1.28
HDLBP-214ENST00000427183 NBEAL2Q6ZNJ1 2754 aa7.05□□□□□ -1.28
HDLBP-214ENST00000427183 KRTAP21-3Q3LHN1 58 aa7.02□□□□□ -1.29
HDLBP-214ENST00000427183 CELSR1Q9NYQ6 3014 aa7.01□□□□□ -1.29
HDLBP-214ENST00000427183 ITPR2Q14571 2701 aa7□□□□□ -1.29
HDLBP-214ENST00000427183 NOTCH1P46531 2555 aa6.96□□□□□ -1.3
HDLBP-214ENST00000427183 NF1P21359 2839 aa6.94□□□□□ -1.3
HDLBP-214ENST00000427183 KRTAP13-2Q52LG2 175 aa6.94□□□□□ -1.3
HDLBP-214ENST00000427183 ANK3Q12955 4377 aaKnown RBP6.92□□□□□ -1.3
HDLBP-214ENST00000427183 PDZD2O15018 2839 aa6.91□□□□□ -1.3
HDLBP-214ENST00000427183 NSD1Q96L73 2696 aaPredicted RBP6.91□□□□□ -1.3
HDLBP-214ENST00000427183 KRTAP7-1Q8IUC3 87 aa6.91□□□□□ -1.3
HDLBP-214ENST00000427183 KRTAP10-8P60410 259 aa6.89□□□□□ -1.31
HDLBP-214ENST00000427183 RPS29P62273 56 aaKnown RBP6.89□□□□□ -1.31
HDLBP-214ENST00000427183 VPS13CQ709C8 3753 aa6.88□□□□□ -1.31
HDLBP-214ENST00000427183 KMT2BQ9UMN6 2715 aaPredicted RBP6.88□□□□□ -1.31
HDLBP-214ENST00000427183 HIVEP1P15822 2718 aa6.87□□□□□ -1.31
HDLBP-214ENST00000427183 TENM4Q6N022 2769 aa6.86□□□□□ -1.31
HDLBP-214ENST00000427183 A0A1B0GVY2 172 aa6.84□□□□□ -1.31
HDLBP-214ENST00000427183 CSMD2Q7Z408 3487 aa6.84□□□□□ -1.31
HDLBP-214ENST00000427183 ZFHX3Q15911 3703 aa6.83□□□□□ -1.32
HDLBP-214ENST00000427183 Q6ZRN7 208 aaPredicted RBP6.82□□□□□ -1.32
HDLBP-214ENST00000427183 NIPBLQ6KC79 2804 aaeCLIP6.78□□□□□ -1.322e-6■□□□□ 10.8
HDLBP-214ENST00000427183 KRTAP13-1Q8IUC0 172 aa6.77□□□□□ -1.33
HDLBP-214ENST00000427183 PP632Q6XCG6 107 aa6.76□□□□□ -1.33
HDLBP-214ENST00000427183 NBPF19A0A087WUL8 3843 aa6.74□□□□□ -1.33
HDLBP-214ENST00000427183 AKAP9Q99996 3911 aa6.74□□□□□ -1.33
HDLBP-214ENST00000427183 P0C880 135 aa6.74□□□□□ -1.33
HDLBP-214ENST00000427183 H0YAA0 97 aa6.7□□□□□ -1.34
HDLBP-214ENST00000427183 OTOGQ6ZRI0 2925 aa6.66□□□□□ -1.34
HDLBP-214ENST00000427183 TENM1Q9UKZ4 2725 aa6.65□□□□□ -1.34
HDLBP-214ENST00000427183 ZNF469Q96JG9 3925 aaPredicted RBP6.64□□□□□ -1.35
HDLBP-214ENST00000427183 VWFP04275 2813 aa6.63□□□□□ -1.35
HDLBP-214ENST00000427183 XP32Q5T750 250 aa6.6□□□□□ -1.35
HDLBP-214ENST00000427183 KRTAP10-10P60014 251 aa6.58□□□□□ -1.36
HDLBP-214ENST00000427183 TENM3Q9P273 2699 aa6.57□□□□□ -1.36
HDLBP-214ENST00000427183 CUBNO60494 3623 aa6.51□□□□□ -1.37
HDLBP-214ENST00000427183 TRRAPQ9Y4A5 3859 aa6.49□□□□□ -1.37
HDLBP-214ENST00000427183 PRO2289Q9P1D8 64 aa6.47□□□□□ -1.37
HDLBP-214ENST00000427183 KRTAP1-4P0C5Y4 121 aa6.45□□□□□ -1.38
HDLBP-214ENST00000427183 FBN1P35555 2871 aaKnown RBP6.39□□□□□ -1.39
HDLBP-214ENST00000427183 HUWE1Q7Z6Z7 4374 aaKnown RBP6.37□□□□□ -1.39
HDLBP-214ENST00000427183 PKD1L1Q8TDX9 2849 aa6.33□□□□□ -1.4
HDLBP-214ENST00000427183 KRTAP12-2P59991 146 aa6.33□□□□□ -1.4
HDLBP-214ENST00000427183 TPRXLQ17RH7 258 aa6.33□□□□□ -1.4
HDLBP-214ENST00000427183 KRTAP13-3Q3SY46 172 aa6.26□□□□□ -1.41
HDLBP-214ENST00000427183 KRTAP13-4Q3LI77 160 aa6.17□□□□□ -1.42
HDLBP-214ENST00000427183 DNAH9Q9NYC9 4486 aa6.17□□□□□ -1.42
HDLBP-214ENST00000427183 DNAH3Q8TD57 4116 aa6.15□□□□□ -1.42
HDLBP-214ENST00000427183 CMYA5Q8N3K9 4069 aa6.14□□□□□ -1.43
HDLBP-214ENST00000427183 KRTAP15-1Q3LI76 137 aa6.13□□□□□ -1.43
HDLBP-214ENST00000427183 KRTAP12-1P59990 96 aa6.12□□□□□ -1.43
HDLBP-214ENST00000427183 TENM2Q9NT68 2774 aa6.11□□□□□ -1.43
HDLBP-214ENST00000427183 TGP01266 2768 aa6.08□□□□□ -1.44
HDLBP-214ENST00000427183 DNAH1Q9P2D7 4330 aa6.07□□□□□ -1.44
HDLBP-214ENST00000427183 DNAH10Q8IVF4 4471 aa6.04□□□□□ -1.44
HDLBP-214ENST00000427183 PLECQ15149 4684 aaKnown RBP6.03□□□□□ -1.44
HDLBP-214ENST00000427183 ANK2Q01484 3957 aa6.03□□□□□ -1.44
HDLBP-214ENST00000427183 VPS13DQ5THJ4 4388 aa5.99□□□□□ -1.45
HDLBP-214ENST00000427183 SRRM2Q9UQ35 2752 aaKnown RBP5.99□□□□□ -1.45
HDLBP-214ENST00000427183 CRCT1Q9UGL9 99 aa5.98□□□□□ -1.45
HDLBP-214ENST00000427183 DYNC2H1Q8NCM8 4307 aaKnown RBP5.97□□□□□ -1.45
HDLBP-214ENST00000427183 ALMS1Q8TCU4 4167 aa5.95□□□□□ -1.46
HDLBP-214ENST00000427183 DNAH17Q9UFH2 4485 aa5.94□□□□□ -1.46
HDLBP-214ENST00000427183 MEGF8Q7Z7M0 2845 aa5.93□□□□□ -1.46
HDLBP-214ENST00000427183 KRTAP3-1Q9BYR8 98 aa5.9□□□□□ -1.46
HDLBP-214ENST00000427183 STARD9Q9P2P6 4700 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms