RNA–Protein interactions for RNA: ENST00000426921.5

UBXN4-204, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-204ENST00000426921 DSCR8Q96T75 97 aa10.33□□□□□ -0.76
UBXN4-204ENST00000426921 VPS25Q9BRG1 176 aa10.33□□□□□ -0.76
UBXN4-204ENST00000426921 MT1FP04733 61 aa10.31□□□□□ -0.76
UBXN4-204ENST00000426921 C21orf62-AS1Q17RA5 79 aa10.31□□□□□ -0.76
UBXN4-204ENST00000426921 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.29□□□□□ -0.76
UBXN4-204ENST00000426921 J3KT08 172 aa10.29□□□□□ -0.76
UBXN4-204ENST00000426921 SCGB1C2P0DMR2 95 aa10.29□□□□□ -0.76
UBXN4-204ENST00000426921 ZCCHC13Q8WW36 166 aaKnown RBP10.27□□□□□ -0.77
UBXN4-204ENST00000426921 C9JAW5 83 aa10.26□□□□□ -0.77
UBXN4-204ENST00000426921 Q6ZQT0 140 aa10.26□□□□□ -0.77
UBXN4-204ENST00000426921 BAALC-AS2P0C853 105 aa10.25□□□□□ -0.77
UBXN4-204ENST00000426921 KRTAP9-3Q9BYQ3 159 aa10.24□□□□□ -0.77
UBXN4-204ENST00000426921 LCE2BO14633 110 aa10.23□□□□□ -0.77
UBXN4-204ENST00000426921 Q8N9P0 234 aaPredicted RBP10.23□□□□□ -0.77
UBXN4-204ENST00000426921 MTURNQ8N3F0 131 aa10.22□□□□□ -0.77
UBXN4-204ENST00000426921 KRTAP9-7A8MTY7 169 aa10.2□□□□□ -0.78
UBXN4-204ENST00000426921 SPINK7P58062 85 aa10.2□□□□□ -0.78
UBXN4-204ENST00000426921 KRTAP10-10P60014 251 aa10.2□□□□□ -0.78
UBXN4-204ENST00000426921 FCGBPQ9Y6R7 5405 aaPredicted RBP10.18□□□□□ -0.78
UBXN4-204ENST00000426921 A0A1B0GW54 56 aa10.18□□□□□ -0.78
UBXN4-204ENST00000426921 NDUFB1O75438 58 aa10.18□□□□□ -0.78
UBXN4-204ENST00000426921 JMJD7-PLA2G4BH0Y9G9 81 aa10.16□□□□□ -0.78
UBXN4-204ENST00000426921 LOC110117498A0A087WWA1 95 aa10.15□□□□□ -0.78
UBXN4-204ENST00000426921 A8MWP4 228 aa10.15□□□□□ -0.78
UBXN4-204ENST00000426921 TMA7Q9Y2S6 64 aaKnown RBP10.15□□□□□ -0.78
UBXN4-204ENST00000426921 C8orf17Q9NRJ1 99 aa10.14□□□□□ -0.79
UBXN4-204ENST00000426921 ATXN8Q156A1 80 aa10.13□□□□□ -0.79
UBXN4-204ENST00000426921 KRTAP19-1Q8IUB9 90 aa10.13□□□□□ -0.79
UBXN4-204ENST00000426921 PDE6GP18545 87 aa10.11□□□□□ -0.79
UBXN4-204ENST00000426921 IGKV3D-7A0A0C4DH55 119 aa10.1□□□□□ -0.79
UBXN4-204ENST00000426921 M0R143 59 aa10.09□□□□□ -0.79
UBXN4-204ENST00000426921 WFDC13Q8IUB5 93 aa10.08□□□□□ -0.8
UBXN4-204ENST00000426921 NAA38Q9BRA0 125 aaKnown RBP10.07□□□□□ -0.8
UBXN4-204ENST00000426921 Q6ZVQ6 151 aa10.06□□□□□ -0.8
UBXN4-204ENST00000426921 PRR15Q8IV56 129 aa10.04□□□□□ -0.8
UBXN4-204ENST00000426921 C14orf132Q9NPU4 83 aa10.04□□□□□ -0.8
UBXN4-204ENST00000426921 LYRM7Q5U5X0 104 aa10.03□□□□□ -0.8
UBXN4-204ENST00000426921 MMP24-AS1A0A0U1RRL7 71 aa9.98□□□□□ -0.81
UBXN4-204ENST00000426921 NREPQ16612 68 aa9.98□□□□□ -0.81
UBXN4-204ENST00000426921 TMEM254Q8TBM7 123 aa9.98□□□□□ -0.81
UBXN4-204ENST00000426921 MRPL34Q9BQ48 92 aaKnown RBP9.96□□□□□ -0.82
UBXN4-204ENST00000426921 KRTAP19-6Q3LI70 58 aa9.93□□□□□ -0.82
UBXN4-204ENST00000426921 MACF1Q9UPN3 7388 aaKnown RBP9.92□□□□□ -0.82
UBXN4-204ENST00000426921 K7EQZ3 153 aa9.9□□□□□ -0.82
UBXN4-204ENST00000426921 SMIM6P0DI80 62 aa9.9□□□□□ -0.82
UBXN4-204ENST00000426921 hDV103S1A0JD37 113 aa9.89□□□□□ -0.83
UBXN4-204ENST00000426921 LINC00846Q9NV44 126 aa9.89□□□□□ -0.83
UBXN4-204ENST00000426921 H1FX-AS1Q4G0G2 97 aa9.87□□□□□ -0.83
UBXN4-204ENST00000426921 H3BT86 120 aa9.85□□□□□ -0.83
UBXN4-204ENST00000426921 SYNE2Q8WXH0 6885 aaKnown RBP9.83□□□□□ -0.84
UBXN4-204ENST00000426921 NDUFS5O43920 106 aa9.82□□□□□ -0.84
UBXN4-204ENST00000426921 BATFQ16520 125 aa9.79□□□□□ -0.84
UBXN4-204ENST00000426921 TSTD3H0UI37 97 aa9.78□□□□□ -0.84
UBXN4-204ENST00000426921 BPY2O14599 106 aa9.78□□□□□ -0.84
UBXN4-204ENST00000426921 C7orf65Q6ZTY9 151 aa9.78□□□□□ -0.84
UBXN4-204ENST00000426921 IGKV2D-30A0A075B6S6 120 aa9.77□□□□□ -0.85
UBXN4-204ENST00000426921 C9orf118A6NHY6 69 aa9.77□□□□□ -0.85
UBXN4-204ENST00000426921 IGKV2-30P06310 120 aa9.77□□□□□ -0.85
UBXN4-204ENST00000426921 Q5W150 140 aa9.77□□□□□ -0.85
UBXN4-204ENST00000426921 A0A1W2PPM0 123 aa9.74□□□□□ -0.85
UBXN4-204ENST00000426921 TAX1BP3O14907 124 aa9.72□□□□□ -0.85
UBXN4-204ENST00000426921 CASC2Q6XLA1 102 aa9.69□□□□□ -0.86
UBXN4-204ENST00000426921 Q8N9L7 120 aa9.69□□□□□ -0.86
UBXN4-204ENST00000426921 HCG22E2RYF7 251 aa9.66□□□□□ -0.86
UBXN4-204ENST00000426921 CXCL6P80162 114 aa9.63□□□□□ -0.87
UBXN4-204ENST00000426921 C4orf26Q17RF5 130 aa9.63□□□□□ -0.87
UBXN4-204ENST00000426921 SMCPP49901 116 aaPredicted RBP9.58□□□□□ -0.88
UBXN4-204ENST00000426921 SPCS1Q9Y6A9 102 aa9.58□□□□□ -0.88
UBXN4-204ENST00000426921 KRTAP6-3Q3LI67 103 aa9.56□□□□□ -0.88
UBXN4-204ENST00000426921 KRTAP3-1Q9BYR8 98 aa9.52□□□□□ -0.89
UBXN4-204ENST00000426921 UBL5Q9BZL1 73 aa9.52□□□□□ -0.89
UBXN4-204ENST00000426921 LOC105371267A0A1B0GV96 52 aa9.5□□□□□ -0.89
UBXN4-204ENST00000426921 C5orf47Q569G3 176 aa9.5□□□□□ -0.89
UBXN4-204ENST00000426921 PRO0461Q9UI25 63 aa9.48□□□□□ -0.89
UBXN4-204ENST00000426921 S4R3F8 94 aa9.46□□□□□ -0.9
UBXN4-204ENST00000426921 FAM236AA0A1B0GUQ0 79 aa9.44□□□□□ -0.9
UBXN4-204ENST00000426921 FAM236BA0A1B0GV22 79 aa9.44□□□□□ -0.9
UBXN4-204ENST00000426921 MT1BP07438 61 aa9.42□□□□□ -0.9
UBXN4-204ENST00000426921 CSAG1Q6PB30 78 aa9.42□□□□□ -0.9
UBXN4-204ENST00000426921 C1orf64Q8NEQ6 169 aa9.42□□□□□ -0.9
UBXN4-204ENST00000426921 LCA10Q71F78 164 aa9.41□□□□□ -0.9
UBXN4-204ENST00000426921 SPRR2GQ9BYE4 73 aa9.41□□□□□ -0.9
UBXN4-204ENST00000426921 KRTAP19-8Q3LI54 63 aa9.39□□□□□ -0.91
UBXN4-204ENST00000426921 TP53AIP1Q9HCN2 124 aa9.39□□□□□ -0.91
UBXN4-204ENST00000426921 K7EP34 96 aa9.38□□□□□ -0.91
UBXN4-204ENST00000426921 COL5A1-AS1Q5SY13 56 aa9.38□□□□□ -0.91
UBXN4-204ENST00000426921 Q5VV11 94 aa9.36□□□□□ -0.91
UBXN4-204ENST00000426921 A6NN06 94 aa9.35□□□□□ -0.91
UBXN4-204ENST00000426921 NEBP20929 6669 aa9.28□□□□□ -0.92
UBXN4-204ENST00000426921 KLKP1Q107X0 134 aa9.28□□□□□ -0.92
UBXN4-204ENST00000426921 KRTAP3-3Q9BYR6 98 aa9.28□□□□□ -0.92
UBXN4-204ENST00000426921 KRTAP10-5P60370 271 aa9.24□□□□□ -0.93
UBXN4-204ENST00000426921 CYP4F30PQ9H0H9 118 aa9.24□□□□□ -0.93
UBXN4-204ENST00000426921 GTF2H5Q6ZYL4 71 aa9.21□□□□□ -0.94
UBXN4-204ENST00000426921 MUC12Q9UKN1 5478 aa9.21□□□□□ -0.94
UBXN4-204ENST00000426921 F8W1H4 67 aa9.2□□□□□ -0.94
UBXN4-204ENST00000426921 ETDBQ3ZM63 59 aa9.18□□□□□ -0.94
UBXN4-204ENST00000426921 TRAV22A0A0B4J277 110 aa9.16□□□□□ -0.94
UBXN4-204ENST00000426921 CRIPTQ9P021 101 aa9.16□□□□□ -0.94
UBXN4-204ENST00000426921 LOC101927531A0A1B0GV80 90 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms