RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 UBR4Q5T4S7 5183 aa4.13□□□□□ -1.75
LINC01049-201ENST00000426840 TRBV7-4A0A0J9YYF1 115 aa4.12□□□□□ -1.75
LINC01049-201ENST00000426840 A0A1B0GV72 72 aa4.12□□□□□ -1.75
LINC01049-201ENST00000426840 C9JAW5 83 aa4.12□□□□□ -1.75
LINC01049-201ENST00000426840 RBM3P98179 157 aaKnown RBP4.12□□□□□ -1.75
LINC01049-201ENST00000426840 TPRXLQ17RH7 258 aa4.12□□□□□ -1.75
LINC01049-201ENST00000426840 KRTAP13-3Q3SY46 172 aa4.12□□□□□ -1.75
LINC01049-201ENST00000426840 ASB16-AS1Q495Z4 193 aa4.12□□□□□ -1.75
LINC01049-201ENST00000426840 Q75L30 129 aa4.11□□□□□ -1.75
LINC01049-201ENST00000426840 SEC61BP60468 96 aaKnown RBP4.1□□□□□ -1.75
LINC01049-201ENST00000426840 SPCS1Q9Y6A9 102 aa4.1□□□□□ -1.75
LINC01049-201ENST00000426840 A0A087WSZ3 146 aa4.09□□□□□ -1.75
LINC01049-201ENST00000426840 JMJD7-PLA2G4BH0Y9G9 81 aa4.09□□□□□ -1.75
LINC01049-201ENST00000426840 OBSCN-AS1Q96MR7 158 aa4.09□□□□□ -1.75
LINC01049-201ENST00000426840 DSCR8Q96T75 97 aa4.09□□□□□ -1.75
LINC01049-201ENST00000426840 H3BT86 120 aa4.08□□□□□ -1.76
LINC01049-201ENST00000426840 CCKP06307 115 aa4.08□□□□□ -1.76
LINC01049-201ENST00000426840 MTURNQ8N3F0 131 aa4.08□□□□□ -1.76
LINC01049-201ENST00000426840 MUC17Q685J3 4493 aa4.07□□□□□ -1.76
LINC01049-201ENST00000426840 LOC110117498A0A087WWA1 95 aa4.07□□□□□ -1.76
LINC01049-201ENST00000426840 K7EP34 96 aa4.07□□□□□ -1.76
LINC01049-201ENST00000426840 Q6ZQT0 140 aa4.07□□□□□ -1.76
LINC01049-201ENST00000426840 Q96NJ1 140 aa4.07□□□□□ -1.76
LINC01049-201ENST00000426840 SS18L2Q9UHA2 77 aa4.07□□□□□ -1.76
LINC01049-201ENST00000426840 PRO0461Q9UI25 63 aa4.06□□□□□ -1.76
LINC01049-201ENST00000426840 RNF213Q63HN8 5207 aa4.06□□□□□ -1.76
LINC01049-201ENST00000426840 PDE6GP18545 87 aa4.05□□□□□ -1.76
LINC01049-201ENST00000426840 VPS25Q9BRG1 176 aa4.05□□□□□ -1.76
LINC01049-201ENST00000426840 C14orf132Q9NPU4 83 aa4.05□□□□□ -1.76
LINC01049-201ENST00000426840 C9orf92A6NGG3 77 aa4.04□□□□□ -1.76
LINC01049-201ENST00000426840 LINC00472Q9H8W2 130 aa4.04□□□□□ -1.76
LINC01049-201ENST00000426840 A0A1B0GW54 56 aa4.03□□□□□ -1.76
LINC01049-201ENST00000426840 GTF2H5Q6ZYL4 71 aa4.03□□□□□ -1.76
LINC01049-201ENST00000426840 DEFB116Q30KQ4 102 aa4.02□□□□□ -1.77
LINC01049-201ENST00000426840 F8W1H4 67 aa4.01□□□□□ -1.77
LINC01049-201ENST00000426840 IGKV4-1P06312 121 aa4.01□□□□□ -1.77
LINC01049-201ENST00000426840 NOTCH2NLQ7Z3S9 236 aa3.98□□□□□ -1.77
LINC01049-201ENST00000426840 SIGMAR1Q99720 223 aa3.98□□□□□ -1.77
LINC01049-201ENST00000426840 A0A1B0GV90 55 aa3.97□□□□□ -1.77
LINC01049-201ENST00000426840 J3KT08 172 aa3.97□□□□□ -1.77
LINC01049-201ENST00000426840 DSCR10P59022 87 aa3.97□□□□□ -1.77
LINC01049-201ENST00000426840 RPL37P61927 97 aaKnown RBP3.97□□□□□ -1.77
LINC01049-201ENST00000426840 NREPQ16612 68 aa3.97□□□□□ -1.77
LINC01049-201ENST00000426840 ETDBQ3ZM63 59 aa3.97□□□□□ -1.77
LINC01049-201ENST00000426840 KRTAP4-1Q9BYQ7 146 aa3.97□□□□□ -1.77
LINC01049-201ENST00000426840 KRTAP2-2Q9BYT5 123 aa3.97□□□□□ -1.77
LINC01049-201ENST00000426840 KRTAP16-1A8MUX0 517 aa3.96□□□□□ -1.78
LINC01049-201ENST00000426840 LINC00313P59037 77 aa3.96□□□□□ -1.78
LINC01049-201ENST00000426840 MUC2Q02817 5179 aa3.95□□□□□ -1.78
LINC01049-201ENST00000426840 A0A1B0GVX0 72 aa3.95□□□□□ -1.78
LINC01049-201ENST00000426840 PCOTHQ58A44 107 aa3.95□□□□□ -1.78
LINC01049-201ENST00000426840 C20orf166-AS1Q96NR2 134 aa3.95□□□□□ -1.78
LINC01049-201ENST00000426840 IGHV6-1A0A0B4J1U7 121 aa3.94□□□□□ -1.78
LINC01049-201ENST00000426840 A8MUU9 505 aa3.94□□□□□ -1.78
LINC01049-201ENST00000426840 Q6ZVQ6 151 aa3.94□□□□□ -1.78
LINC01049-201ENST00000426840 LINC00846Q9NV44 126 aa3.94□□□□□ -1.78
LINC01049-201ENST00000426840 IGKV3D-7A0A0C4DH55 119 aa3.93□□□□□ -1.78
LINC01049-201ENST00000426840 A8MWP4 228 aa3.93□□□□□ -1.78
LINC01049-201ENST00000426840 C8orf87E5RJ46 101 aa3.93□□□□□ -1.78
LINC01049-201ENST00000426840 NDUFB1O75438 58 aa3.92□□□□□ -1.78
LINC01049-201ENST00000426840 PRR15Q8IV56 129 aa3.91□□□□□ -1.78
LINC01049-201ENST00000426840 C8orf17Q9NRJ1 99 aa3.91□□□□□ -1.78
LINC01049-201ENST00000426840 FAT4Q6V0I7 4981 aa3.9□□□□□ -1.78
LINC01049-201ENST00000426840 BPY2O14599 106 aa3.9□□□□□ -1.79
LINC01049-201ENST00000426840 ATP11AUNQ6ZP68 121 aa3.9□□□□□ -1.79
LINC01049-201ENST00000426840 K7EQZ3 153 aa3.89□□□□□ -1.79
LINC01049-201ENST00000426840 UBL5Q9BZL1 73 aa3.89□□□□□ -1.79
LINC01049-201ENST00000426840 MMP24-AS1A0A0U1RRL7 71 aa3.87□□□□□ -1.79
LINC01049-201ENST00000426840 Q8N9L7 120 aa3.87□□□□□ -1.79
LINC01049-201ENST00000426840 ACYP1P07311 99 aa3.86□□□□□ -1.79
LINC01049-201ENST00000426840 KRTAP19-2Q3LHN2 52 aa3.86□□□□□ -1.79
LINC01049-201ENST00000426840 TMEM254Q8TBM7 123 aa3.85□□□□□ -1.79
LINC01049-201ENST00000426840 MRPL34Q9BQ48 92 aaKnown RBP3.85□□□□□ -1.79
LINC01049-201ENST00000426840 A0A0U1RQV1 116 aa3.84□□□□□ -1.79
LINC01049-201ENST00000426840 FAM240AA0A1B0GVK7 77 aa3.84□□□□□ -1.79
LINC01049-201ENST00000426840 hDV103S1A0JD37 113 aa3.84□□□□□ -1.79
LINC01049-201ENST00000426840 CXCL6P80162 114 aa3.83□□□□□ -1.8
LINC01049-201ENST00000426840 ZCCHC13Q8WW36 166 aaKnown RBP3.83□□□□□ -1.8
LINC01049-201ENST00000426840 WFDC13Q8IUB5 93 aa3.82□□□□□ -1.8
LINC01049-201ENST00000426840 CASC2Q6XLA1 102 aa3.81□□□□□ -1.8
LINC01049-201ENST00000426840 HCG22E2RYF7 251 aa3.79□□□□□ -1.8
LINC01049-201ENST00000426840 KRTAP10-6P60371 365 aaPredicted RBP3.79□□□□□ -1.8
LINC01049-201ENST00000426840 NDUFS5O43920 106 aa3.78□□□□□ -1.8
LINC01049-201ENST00000426840 HRES1P13985 223 aa3.78□□□□□ -1.8
LINC01049-201ENST00000426840 Q5W150 140 aa3.78□□□□□ -1.8
LINC01049-201ENST00000426840 LINC00643Q86TS7 51 aa3.78□□□□□ -1.8
LINC01049-201ENST00000426840 MT3P25713 68 aa3.77□□□□□ -1.81
LINC01049-201ENST00000426840 SPINK7P58062 85 aa3.77□□□□□ -1.81
LINC01049-201ENST00000426840 ATP5EP2Q5VTU8 51 aa3.77□□□□□ -1.81
LINC01049-201ENST00000426840 J3QR89 54 aa3.76□□□□□ -1.81
LINC01049-201ENST00000426840 KRTAP10-7P60409 375 aaPredicted RBP3.76□□□□□ -1.81
LINC01049-201ENST00000426840 MT1HP80294 61 aa3.75□□□□□ -1.81
LINC01049-201ENST00000426840 HIST1H4AP62805 103 aaKnown RBP3.74□□□□□ -1.81
LINC01049-201ENST00000426840 COX6B2Q6YFQ2 88 aa3.74□□□□□ -1.81
LINC01049-201ENST00000426840 FLGP20930 4061 aaPredicted RBP3.73□□□□□ -1.81
LINC01049-201ENST00000426840 A0A087WVE0 104 aa3.72□□□□□ -1.81
LINC01049-201ENST00000426840 TP53AIP1Q9HCN2 124 aa3.72□□□□□ -1.81
LINC01049-201ENST00000426840 RBM12B-AS1Q9P1G2 102 aa3.71□□□□□ -1.82
LINC01049-201ENST00000426840 K7ERU9 68 aa3.7□□□□□ -1.82
LINC01049-201ENST00000426840 C7orf65Q6ZTY9 151 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms