RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 ALMS1Q8TCU4 4167 aa8.56□□□□□ -1.04
ERCC3-202ENST00000426778 A0A1B0GVX0 72 aa8.55□□□□□ -1.04
ERCC3-202ENST00000426778 H3BPC8 53 aa8.55□□□□□ -1.04
ERCC3-202ENST00000426778 CIRBP-AS1Q8TBR5 109 aa8.55□□□□□ -1.04
ERCC3-202ENST00000426778 LINC00483Q53H64 154 aa8.53□□□□□ -1.04
ERCC3-202ENST00000426778 SPAG11AQ6PDA7 123 aa8.53□□□□□ -1.04
ERCC3-202ENST00000426778 ZNF861PO60384 105 aa8.52□□□□□ -1.05
ERCC3-202ENST00000426778 IGLV7-46A0A075B6I9 117 aa8.51□□□□□ -1.05
ERCC3-202ENST00000426778 DNAH5Q8TE73 4624 aa8.51□□□□□ -1.05
ERCC3-202ENST00000426778 RETNLBQ9BQ08 111 aa8.5□□□□□ -1.05
ERCC3-202ENST00000426778 ASB16-AS1Q495Z4 193 aa8.5□□□□□ -1.05
ERCC3-202ENST00000426778 MRPL34Q9BQ48 92 aaKnown RBP8.5□□□□□ -1.05
ERCC3-202ENST00000426778 Q5W150 140 aa8.49□□□□□ -1.05
ERCC3-202ENST00000426778 ZNF706Q9Y5V0 76 aaPredicted RBP8.48□□□□□ -1.05
ERCC3-202ENST00000426778 SPTSSBQ8NFR3 76 aa8.48□□□□□ -1.05
ERCC3-202ENST00000426778 TP53AIP1Q9HCN2 124 aa8.47□□□□□ -1.05
ERCC3-202ENST00000426778 V9GYY9 64 aa8.47□□□□□ -1.05
ERCC3-202ENST00000426778 LRP1BQ9NZR2 4599 aa8.47□□□□□ -1.05
ERCC3-202ENST00000426778 Q6ZR54 194 aa8.46□□□□□ -1.06
ERCC3-202ENST00000426778 PLAC8Q9NZF1 115 aa8.46□□□□□ -1.06
ERCC3-202ENST00000426778 A6NED7 52 aa8.44□□□□□ -1.06
ERCC3-202ENST00000426778 LY6G6CO95867 125 aa8.44□□□□□ -1.06
ERCC3-202ENST00000426778 LIMD2Q9BT23 127 aa8.44□□□□□ -1.06
ERCC3-202ENST00000426778 HRES1P13985 223 aa8.44□□□□□ -1.06
ERCC3-202ENST00000426778 HYDINQ4G0P3 5121 aa8.42□□□□□ -1.06
ERCC3-202ENST00000426778 IGLV7-43P04211 117 aa8.42□□□□□ -1.06
ERCC3-202ENST00000426778 PMAIP1Q13794 54 aa8.42□□□□□ -1.06
ERCC3-202ENST00000426778 LCA10Q71F78 164 aa8.42□□□□□ -1.06
ERCC3-202ENST00000426778 PRR26Q8N8Z3 221 aa8.41□□□□□ -1.06
ERCC3-202ENST00000426778 C1orf134Q5TEV5 83 aa8.41□□□□□ -1.06
ERCC3-202ENST00000426778 KRTAP10-2P60368 255 aa8.4□□□□□ -1.06
ERCC3-202ENST00000426778 FAT2Q9NYQ8 4349 aa8.37□□□□□ -1.07
ERCC3-202ENST00000426778 VPS13BQ7Z7G8 4022 aa8.35□□□□□ -1.07
ERCC3-202ENST00000426778 SPINK7P58062 85 aa8.34□□□□□ -1.07
ERCC3-202ENST00000426778 Q75L30 129 aa8.34□□□□□ -1.07
ERCC3-202ENST00000426778 LOC101927531A0A1B0GV80 90 aa8.33□□□□□ -1.08
ERCC3-202ENST00000426778 PKD1P98161 4303 aa8.31□□□□□ -1.08
ERCC3-202ENST00000426778 KRTAP13-3Q3SY46 172 aa8.3□□□□□ -1.08
ERCC3-202ENST00000426778 KRTAP13-2Q52LG2 175 aa8.3□□□□□ -1.08
ERCC3-202ENST00000426778 LINC01558Q9Y6Z2 57 aa8.29□□□□□ -1.08
ERCC3-202ENST00000426778 LINC00313P59037 77 aa8.28□□□□□ -1.08
ERCC3-202ENST00000426778 PKHD1P08F94 4074 aa8.26□□□□□ -1.09
ERCC3-202ENST00000426778 SEC61GP60059 68 aa8.26□□□□□ -1.09
ERCC3-202ENST00000426778 KRTAP10-1P60331 282 aa8.25□□□□□ -1.09
ERCC3-202ENST00000426778 SSBP3-AS1Q7Z2R9 100 aa8.23□□□□□ -1.09
ERCC3-202ENST00000426778 CDC42SE1Q9NRR8 79 aa8.22□□□□□ -1.09
ERCC3-202ENST00000426778 IGKV2D-30A0A075B6S6 120 aa8.22□□□□□ -1.09
ERCC3-202ENST00000426778 IGKV2-30P06310 120 aa8.22□□□□□ -1.09
ERCC3-202ENST00000426778 ATP11AUNQ6ZP68 121 aa8.2□□□□□ -1.1
ERCC3-202ENST00000426778 ACYP2P14621 99 aa8.19□□□□□ -1.1
ERCC3-202ENST00000426778 C8orf87E5RJ46 101 aa8.18□□□□□ -1.1
ERCC3-202ENST00000426778 A6NN06 94 aa8.16□□□□□ -1.1
ERCC3-202ENST00000426778 FAM229AH3BQW9 127 aa8.16□□□□□ -1.1
ERCC3-202ENST00000426778 KRTAP1-4P0C5Y4 121 aa8.14□□□□□ -1.11
ERCC3-202ENST00000426778 DMAC1Q96GE9 116 aa8.14□□□□□ -1.11
ERCC3-202ENST00000426778 KTN1-AS1Q86SY8 53 aa8.13□□□□□ -1.11
ERCC3-202ENST00000426778 KRTAP16-1A8MUX0 517 aa8.13□□□□□ -1.11
ERCC3-202ENST00000426778 PLA2G1BP04054 148 aaKnown RBP8.12□□□□□ -1.11
ERCC3-202ENST00000426778 FAT1Q14517 4588 aa8.11□□□□□ -1.11
ERCC3-202ENST00000426778 SPINK1P00995 79 aa8.09□□□□□ -1.11
ERCC3-202ENST00000426778 A0A1B0GU69 56 aa8.08□□□□□ -1.12
ERCC3-202ENST00000426778 Q6ZSA8 131 aa8.08□□□□□ -1.12
ERCC3-202ENST00000426778 TYMSOSQ8TAI1 123 aa8.07□□□□□ -1.12
ERCC3-202ENST00000426778 C4orf48Q5BLP8 95 aa8.06□□□□□ -1.12
ERCC3-202ENST00000426778 C7orf65Q6ZTY9 151 aa8.06□□□□□ -1.12
ERCC3-202ENST00000426778 Q8N1X5 172 aa8.06□□□□□ -1.12
ERCC3-202ENST00000426778 SMR3BP02814 79 aaPredicted RBP8.05□□□□□ -1.12
ERCC3-202ENST00000426778 RBM12B-AS1Q9P1G2 102 aa8.05□□□□□ -1.12
ERCC3-202ENST00000426778 PRAC1Q96KF2 57 aa8.02□□□□□ -1.13
ERCC3-202ENST00000426778 ADM2Q7Z4H4 148 aa8.01□□□□□ -1.13
ERCC3-202ENST00000426778 SACSQ9NZJ4 4579 aa8.01□□□□□ -1.13
ERCC3-202ENST00000426778 DYNC1H1Q14204 4646 aaKnown RBP8□□□□□ -1.13
ERCC3-202ENST00000426778 C9orf92A6NGG3 77 aa7.99□□□□□ -1.13
ERCC3-202ENST00000426778 LINC00304Q8N9R0 145 aa7.92□□□□□ -1.14
ERCC3-202ENST00000426778 MIR22HGQ0VDD5 57 aa7.92□□□□□ -1.14
ERCC3-202ENST00000426778 UQCR11O14957 56 aa7.89□□□□□ -1.15
ERCC3-202ENST00000426778 SPATA8Q6RVD6 105 aa7.87□□□□□ -1.15
ERCC3-202ENST00000426778 APOBP04114 4563 aaKnown RBP7.85□□□□□ -1.15
ERCC3-202ENST00000426778 LRP1Q07954 4544 aaKnown RBP7.82□□□□□ -1.16
ERCC3-202ENST00000426778 MYCBP2O75592 4640 aa7.81□□□□□ -1.16
ERCC3-202ENST00000426778 FLG2Q5D862 2391 aaPredicted RBP7.8□□□□□ -1.16
ERCC3-202ENST00000426778 KMT2CQ8NEZ4 4911 aaKnown RBP7.78□□□□□ -1.16
ERCC3-202ENST00000426778 PKHD1L1Q86WI1 4243 aa7.77□□□□□ -1.17
ERCC3-202ENST00000426778 DMBT1Q9UGM3 2413 aaPredicted RBP7.77□□□□□ -1.17
ERCC3-202ENST00000426778 KRTAP3-1Q9BYR8 98 aa7.76□□□□□ -1.17
ERCC3-202ENST00000426778 HSPG2P98160 4391 aa7.72□□□□□ -1.17
ERCC3-202ENST00000426778 H0YAA0 97 aa7.7□□□□□ -1.18
ERCC3-202ENST00000426778 A8MUU9 505 aa7.68□□□□□ -1.18
ERCC3-202ENST00000426778 CSAG1Q6PB30 78 aa7.68□□□□□ -1.18
ERCC3-202ENST00000426778 C20orf166-AS1Q96NR2 134 aa7.67□□□□□ -1.18
ERCC3-202ENST00000426778 KRTAP10-4P60372 401 aaPredicted RBP7.66□□□□□ -1.18
ERCC3-202ENST00000426778 RYR2Q92736 4967 aa7.65□□□□□ -1.18
ERCC3-202ENST00000426778 FAT3Q8TDW7 4589 aa7.64□□□□□ -1.19
ERCC3-202ENST00000426778 RPS29P62273 56 aaKnown RBP7.64□□□□□ -1.19
ERCC3-202ENST00000426778 A0A1B0GU33 70 aa7.61□□□□□ -1.19
ERCC3-202ENST00000426778 A0A1B0GVY2 172 aa7.6□□□□□ -1.19
ERCC3-202ENST00000426778 TNXBP22105 4242 aa7.58□□□□□ -1.2
ERCC3-202ENST00000426778 LINC01554Q52M75 96 aa7.58□□□□□ -1.2
ERCC3-202ENST00000426778 CRIPTQ9P021 101 aa7.57□□□□□ -1.2
ERCC3-202ENST00000426778 H1FX-AS1Q4G0G2 97 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms