RNA–Protein interactions for RNA: ENST00000426681.2

PDGFA-205, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 357 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-205ENST00000426681 A8MUU9 505 aa12.45□□□□□ -0.42
PDGFA-205ENST00000426681 K7EP34 96 aa12.45□□□□□ -0.42
PDGFA-205ENST00000426681 SMCPP49901 116 aaPredicted RBP12.44□□□□□ -0.42
PDGFA-205ENST00000426681 ATP11AUNQ6ZP68 121 aa12.43□□□□□ -0.42
PDGFA-205ENST00000426681 IGHV6-1A0A0B4J1U7 121 aa12.41□□□□□ -0.42
PDGFA-205ENST00000426681 A0A1B0GVX0 72 aa12.41□□□□□ -0.42
PDGFA-205ENST00000426681 NOTCH2NLQ7Z3S9 236 aa12.41□□□□□ -0.42
PDGFA-205ENST00000426681 KRTAP16-1A8MUX0 517 aa12.4□□□□□ -0.42
PDGFA-205ENST00000426681 PRO0461Q9UI25 63 aa12.4□□□□□ -0.42
PDGFA-205ENST00000426681 LCE2AQ5TA79 106 aaPredicted RBP12.38□□□□□ -0.43
PDGFA-205ENST00000426681 C8orf87E5RJ46 101 aa12.37□□□□□ -0.43
PDGFA-205ENST00000426681 NREPQ16612 68 aa12.35□□□□□ -0.43
PDGFA-205ENST00000426681 GTF2H5Q6ZYL4 71 aa12.35□□□□□ -0.43
PDGFA-205ENST00000426681 NDUFB1O75438 58 aa12.33□□□□□ -0.44
PDGFA-205ENST00000426681 A8MWP4 228 aa12.32□□□□□ -0.44
PDGFA-205ENST00000426681 KRTAP19-2Q3LHN2 52 aa12.3□□□□□ -0.44
PDGFA-205ENST00000426681 LCE2CQ5TA81 110 aa12.27□□□□□ -0.45
PDGFA-205ENST00000426681 IGKV3D-7A0A0C4DH55 119 aa12.26□□□□□ -0.45
PDGFA-205ENST00000426681 F8W1H4 67 aa12.25□□□□□ -0.45
PDGFA-205ENST00000426681 PRR15Q8IV56 129 aa12.22□□□□□ -0.45
PDGFA-205ENST00000426681 C8orf17Q9NRJ1 99 aa12.22□□□□□ -0.45
PDGFA-205ENST00000426681 Q6ZVQ6 151 aa12.18□□□□□ -0.46
PDGFA-205ENST00000426681 Q8N9P0 234 aaPredicted RBP12.16□□□□□ -0.46
PDGFA-205ENST00000426681 BPY2O14599 106 aa12.15□□□□□ -0.46
PDGFA-205ENST00000426681 ETDBQ3ZM63 59 aa12.12□□□□□ -0.47
PDGFA-205ENST00000426681 K7EQZ3 153 aa12.11□□□□□ -0.47
PDGFA-205ENST00000426681 LINC00846Q9NV44 126 aa12.11□□□□□ -0.47
PDGFA-205ENST00000426681 MMP24-AS1A0A0U1RRL7 71 aa12.09□□□□□ -0.47
PDGFA-205ENST00000426681 MT1HP80294 61 aa12.08□□□□□ -0.48
PDGFA-205ENST00000426681 COX6B2Q6YFQ2 88 aa12.08□□□□□ -0.48
PDGFA-205ENST00000426681 ZCCHC13Q8WW36 166 aaKnown RBP12.08□□□□□ -0.48
PDGFA-205ENST00000426681 UBL5Q9BZL1 73 aa12.07□□□□□ -0.48
PDGFA-205ENST00000426681 TMEM254Q8TBM7 123 aa12.06□□□□□ -0.48
PDGFA-205ENST00000426681 MRPL34Q9BQ48 92 aaKnown RBP12.03□□□□□ -0.48
PDGFA-205ENST00000426681 hDV103S1A0JD37 113 aa12.02□□□□□ -0.49
PDGFA-205ENST00000426681 Q8N9L7 120 aa11.99□□□□□ -0.49
PDGFA-205ENST00000426681 HRES1P13985 223 aa11.93□□□□□ -0.5
PDGFA-205ENST00000426681 MPLKIPQ8TAP9 179 aa11.92□□□□□ -0.5
PDGFA-205ENST00000426681 SPINK7P58062 85 aa11.91□□□□□ -0.5
PDGFA-205ENST00000426681 FLGP20930 4061 aaPredicted RBP11.9□□□□□ -0.5
PDGFA-205ENST00000426681 CASC2Q6XLA1 102 aa11.9□□□□□ -0.5
PDGFA-205ENST00000426681 A0A1B0GV90 55 aa11.89□□□□□ -0.51
PDGFA-205ENST00000426681 WFDC13Q8IUB5 93 aa11.89□□□□□ -0.51
PDGFA-205ENST00000426681 NDUFS5O43920 106 aa11.88□□□□□ -0.51
PDGFA-205ENST00000426681 CXCL6P80162 114 aa11.88□□□□□ -0.51
PDGFA-205ENST00000426681 ACYP1P07311 99 aa11.87□□□□□ -0.51
PDGFA-205ENST00000426681 RBM12B-AS1Q9P1G2 102 aa11.86□□□□□ -0.51
PDGFA-205ENST00000426681 M0R2T5 61 aa11.85□□□□□ -0.51
PDGFA-205ENST00000426681 FAM240AA0A1B0GVK7 77 aa11.84□□□□□ -0.51
PDGFA-205ENST00000426681 HCG22E2RYF7 251 aa11.83□□□□□ -0.52
PDGFA-205ENST00000426681 KRTAP10-6P60371 365 aaPredicted RBP11.8□□□□□ -0.52
PDGFA-205ENST00000426681 FAM236DA0A1B0GTK5 79 aa11.79□□□□□ -0.52
PDGFA-205ENST00000426681 FAM236CP0DP71 79 aa11.79□□□□□ -0.52
PDGFA-205ENST00000426681 LORP23490 312 aaPredicted RBP11.78□□□□□ -0.52
PDGFA-205ENST00000426681 Q5W150 140 aa11.77□□□□□ -0.53
PDGFA-205ENST00000426681 KRTAP9-2Q9BYQ4 174 aa11.73□□□□□ -0.53
PDGFA-205ENST00000426681 ATP5EP2Q5VTU8 51 aa11.68□□□□□ -0.54
PDGFA-205ENST00000426681 C7orf65Q6ZTY9 151 aa11.64□□□□□ -0.55
PDGFA-205ENST00000426681 IGKV2D-30A0A075B6S6 120 aa11.63□□□□□ -0.55
PDGFA-205ENST00000426681 IGKV2-30P06310 120 aa11.63□□□□□ -0.55
PDGFA-205ENST00000426681 LCE2DQ5TA82 110 aaPredicted RBP11.63□□□□□ -0.55
PDGFA-205ENST00000426681 TP53AIP1Q9HCN2 124 aa11.62□□□□□ -0.55
PDGFA-205ENST00000426681 LINC00643Q86TS7 51 aa11.59□□□□□ -0.55
PDGFA-205ENST00000426681 HIST1H4AP62805 103 aaKnown RBP11.53□□□□□ -0.56
PDGFA-205ENST00000426681 J3QR89 54 aa11.51□□□□□ -0.57
PDGFA-205ENST00000426681 KRTAP9-8Q9BYQ0 159 aa11.5□□□□□ -0.57
PDGFA-205ENST00000426681 H1FX-AS1Q4G0G2 97 aa11.46□□□□□ -0.57
PDGFA-205ENST00000426681 C4orf26Q17RF5 130 aa11.41□□□□□ -0.58
PDGFA-205ENST00000426681 A0A087WVE0 104 aa11.4□□□□□ -0.58
PDGFA-205ENST00000426681 TRAV22A0A0B4J277 110 aa11.37□□□□□ -0.59
PDGFA-205ENST00000426681 UQCRQO14949 82 aa11.35□□□□□ -0.59
PDGFA-205ENST00000426681 MT2AP02795 61 aa11.35□□□□□ -0.59
PDGFA-205ENST00000426681 CYP4F30PQ9H0H9 118 aa11.33□□□□□ -0.6
PDGFA-205ENST00000426681 LOC101927531A0A1B0GV80 90 aa11.3□□□□□ -0.6
PDGFA-205ENST00000426681 KRTAP3-1Q9BYR8 98 aa11.28□□□□□ -0.6
PDGFA-205ENST00000426681 ATOX1O00244 68 aa11.26□□□□□ -0.61
PDGFA-205ENST00000426681 MT1FP04733 61 aa11.26□□□□□ -0.61
PDGFA-205ENST00000426681 C1orf64Q8NEQ6 169 aa11.26□□□□□ -0.61
PDGFA-205ENST00000426681 H0Y9P7 68 aa11.23□□□□□ -0.61
PDGFA-205ENST00000426681 KRTAP9-6A0A140TA67 174 aa11.22□□□□□ -0.61
PDGFA-205ENST00000426681 K7ERU9 68 aa11.21□□□□□ -0.61
PDGFA-205ENST00000426681 KRTAP10-10P60014 251 aa11.21□□□□□ -0.61
PDGFA-205ENST00000426681 OCR1Q9BZK8 76 aa11.21□□□□□ -0.61
PDGFA-205ENST00000426681 FSIP2Q5CZC0 6907 aa11.18□□□□□ -0.62
PDGFA-205ENST00000426681 CRCT1Q9UGL9 99 aa11.15□□□□□ -0.62
PDGFA-205ENST00000426681 KRTAP9-3Q9BYQ3 159 aa11.13□□□□□ -0.63
PDGFA-205ENST00000426681 IMUPQ9GZP8 106 aa11.13□□□□□ -0.63
PDGFA-205ENST00000426681 S4R3F8 94 aa11.11□□□□□ -0.63
PDGFA-205ENST00000426681 C5orf47Q569G3 176 aa11.1□□□□□ -0.63
PDGFA-205ENST00000426681 MP68P56378 58 aa11.09□□□□□ -0.63
PDGFA-205ENST00000426681 LINC00208Q96KT6 92 aa11.09□□□□□ -0.63
PDGFA-205ENST00000426681 MT-ATP8P03928 68 aa11.07□□□□□ -0.64
PDGFA-205ENST00000426681 SCGB1A1P11684 91 aa11.07□□□□□ -0.64
PDGFA-205ENST00000426681 LCA10Q71F78 164 aa11.05□□□□□ -0.64
PDGFA-205ENST00000426681 CSAG1Q6PB30 78 aa11.02□□□□□ -0.65
PDGFA-205ENST00000426681 H3BPC8 53 aa11.01□□□□□ -0.65
PDGFA-205ENST00000426681 LCE2BO14633 110 aa10.99□□□□□ -0.65
PDGFA-205ENST00000426681 KLKP1Q107X0 134 aa10.99□□□□□ -0.65
PDGFA-205ENST00000426681 KRTAP3-3Q9BYR6 98 aa10.95□□□□□ -0.66
PDGFA-205ENST00000426681 A8MUN3 132 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms