RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 USH2AO75445 5202 aa5.08□□□□□ -1.6
GACAT3-201ENST00000426539 A0A0B4J2C4 111 aa5.06□□□□□ -1.6
GACAT3-201ENST00000426539 A0A1W2PNM2 257 aa5.06□□□□□ -1.6
GACAT3-201ENST00000426539 H0YGX0 51 aa5.06□□□□□ -1.6
GACAT3-201ENST00000426539 K7ERJ3 54 aa5.06□□□□□ -1.6
GACAT3-201ENST00000426539 UBE2V1Q13404 147 aa5.06□□□□□ -1.6
GACAT3-201ENST00000426539 TRBV20-1A0A075B6N2 111 aa5.05□□□□□ -1.6
GACAT3-201ENST00000426539 A0A1W2PPM0 123 aa5.05□□□□□ -1.6
GACAT3-201ENST00000426539 H3BMG7 143 aa5.05□□□□□ -1.6
GACAT3-201ENST00000426539 MT2AP02795 61 aa5.05□□□□□ -1.6
GACAT3-201ENST00000426539 FABP2P12104 132 aa5.04□□□□□ -1.6
GACAT3-201ENST00000426539 GTF2H5Q6ZYL4 71 aa5.04□□□□□ -1.6
GACAT3-201ENST00000426539 NOTCH2NLQ7Z3S9 236 aa5.03□□□□□ -1.6
GACAT3-201ENST00000426539 NAA38Q9BRA0 125 aaKnown RBP5.03□□□□□ -1.6
GACAT3-201ENST00000426539 A0A1B0GX51 115 aa5.02□□□□□ -1.61
GACAT3-201ENST00000426539 K7EP34 96 aa5.02□□□□□ -1.61
GACAT3-201ENST00000426539 SNCGO76070 127 aa5.02□□□□□ -1.61
GACAT3-201ENST00000426539 MT1FP04733 61 aa5.02□□□□□ -1.61
GACAT3-201ENST00000426539 MPLKIPQ8TAP9 179 aa5.02□□□□□ -1.61
GACAT3-201ENST00000426539 SIGMAR1Q99720 223 aa5.02□□□□□ -1.61
GACAT3-201ENST00000426539 PRO1854Q9UHT4 67 aa5.02□□□□□ -1.61
GACAT3-201ENST00000426539 HRES1P13985 223 aa5.01□□□□□ -1.61
GACAT3-201ENST00000426539 LINC00313P59037 77 aa5.01□□□□□ -1.61
GACAT3-201ENST00000426539 SPCS1Q9Y6A9 102 aa5.01□□□□□ -1.61
GACAT3-201ENST00000426539 IGKV4-1P06312 121 aa5□□□□□ -1.61
GACAT3-201ENST00000426539 LYRM7Q5U5X0 104 aa5□□□□□ -1.61
GACAT3-201ENST00000426539 TRBV7-4A0A0J9YYF1 115 aa4.98□□□□□ -1.61
GACAT3-201ENST00000426539 A0A1B0GV72 72 aa4.98□□□□□ -1.61
GACAT3-201ENST00000426539 DEFB116Q30KQ4 102 aa4.98□□□□□ -1.61
GACAT3-201ENST00000426539 ANKRD29Q8N6D5 301 aa4.98□□□□□ -1.61
GACAT3-201ENST00000426539 LINC00472Q9H8W2 130 aa4.98□□□□□ -1.61
GACAT3-201ENST00000426539 FAM236DA0A1B0GTK5 79 aa4.97□□□□□ -1.61
GACAT3-201ENST00000426539 FAM236CP0DP71 79 aa4.97□□□□□ -1.61
GACAT3-201ENST00000426539 PSMB2P49721 201 aa4.97□□□□□ -1.61
GACAT3-201ENST00000426539 FCGBPQ9Y6R7 5405 aaPredicted RBP4.97□□□□□ -1.61
GACAT3-201ENST00000426539 SCGB1C2P0DMR2 95 aa4.96□□□□□ -1.62
GACAT3-201ENST00000426539 SVIPQ8NHG7 77 aa4.95□□□□□ -1.62
GACAT3-201ENST00000426539 ORMDL1Q9P0S3 153 aa4.95□□□□□ -1.62
GACAT3-201ENST00000426539 RBM12B-AS1Q9P1G2 102 aa4.95□□□□□ -1.62
GACAT3-201ENST00000426539 IGHV6-1A0A0B4J1U7 121 aa4.94□□□□□ -1.62
GACAT3-201ENST00000426539 F8W1H4 67 aa4.94□□□□□ -1.62
GACAT3-201ENST00000426539 COX6CP09669 75 aa4.94□□□□□ -1.62
GACAT3-201ENST00000426539 KRTAP10-10P60014 251 aa4.94□□□□□ -1.62
GACAT3-201ENST00000426539 CCKP06307 115 aa4.93□□□□□ -1.62
GACAT3-201ENST00000426539 TMEM256-PLSCR3K7ERE1 68 aa4.92□□□□□ -1.62
GACAT3-201ENST00000426539 DNAL4O96015 105 aa4.92□□□□□ -1.62
GACAT3-201ENST00000426539 TRACP01848 142 aa4.92□□□□□ -1.62
GACAT3-201ENST00000426539 ATXN8Q156A1 80 aa4.92□□□□□ -1.62
GACAT3-201ENST00000426539 H3BQ85 93 aa4.91□□□□□ -1.62
GACAT3-201ENST00000426539 A0A1B0GVX0 72 aa4.9□□□□□ -1.63
GACAT3-201ENST00000426539 PRO0461Q9UI25 63 aa4.9□□□□□ -1.63
GACAT3-201ENST00000426539 C8orf87E5RJ46 101 aa4.89□□□□□ -1.63
GACAT3-201ENST00000426539 C9JAW5 83 aa4.88□□□□□ -1.63
GACAT3-201ENST00000426539 K7ERU9 68 aa4.88□□□□□ -1.63
GACAT3-201ENST00000426539 MTURNQ8N3F0 131 aa4.88□□□□□ -1.63
GACAT3-201ENST00000426539 ZCCHC13Q8WW36 166 aaKnown RBP4.88□□□□□ -1.63
GACAT3-201ENST00000426539 SPINK7P58062 85 aa4.87□□□□□ -1.63
GACAT3-201ENST00000426539 VPS25Q9BRG1 176 aa4.87□□□□□ -1.63
GACAT3-201ENST00000426539 ETDBQ3ZM63 59 aa4.86□□□□□ -1.63
GACAT3-201ENST00000426539 RBM3P98179 157 aaKnown RBP4.85□□□□□ -1.63
GACAT3-201ENST00000426539 H3BT86 120 aa4.84□□□□□ -1.63
GACAT3-201ENST00000426539 J3QR89 54 aa4.84□□□□□ -1.63
GACAT3-201ENST00000426539 KRTAP19-6Q3LI70 58 aa4.84□□□□□ -1.63
GACAT3-201ENST00000426539 Q8N9P0 234 aaPredicted RBP4.84□□□□□ -1.63
GACAT3-201ENST00000426539 DSCR8Q96T75 97 aa4.83□□□□□ -1.64
GACAT3-201ENST00000426539 MACF1Q9UPN3 7388 aaKnown RBP4.83□□□□□ -1.64
GACAT3-201ENST00000426539 J3KT08 172 aa4.82□□□□□ -1.64
GACAT3-201ENST00000426539 Q6ZQT0 140 aa4.82□□□□□ -1.64
GACAT3-201ENST00000426539 BAALC-AS2P0C853 105 aa4.8□□□□□ -1.64
GACAT3-201ENST00000426539 WFDC13Q8IUB5 93 aa4.8□□□□□ -1.64
GACAT3-201ENST00000426539 C8orf17Q9NRJ1 99 aa4.8□□□□□ -1.64
GACAT3-201ENST00000426539 SYNE2Q8WXH0 6885 aaKnown RBP4.79□□□□□ -1.64
GACAT3-201ENST00000426539 A8MWP4 228 aa4.79□□□□□ -1.64
GACAT3-201ENST00000426539 IGKV3D-7A0A0C4DH55 119 aa4.78□□□□□ -1.64
GACAT3-201ENST00000426539 NDUFB1O75438 58 aa4.77□□□□□ -1.65
GACAT3-201ENST00000426539 LOC110117498A0A087WWA1 95 aa4.75□□□□□ -1.65
GACAT3-201ENST00000426539 Q6ZVQ6 151 aa4.75□□□□□ -1.65
GACAT3-201ENST00000426539 LINC00846Q9NV44 126 aa4.75□□□□□ -1.65
GACAT3-201ENST00000426539 PRR15Q8IV56 129 aa4.73□□□□□ -1.65
GACAT3-201ENST00000426539 A0A1B0GW54 56 aa4.72□□□□□ -1.65
GACAT3-201ENST00000426539 JMJD7-PLA2G4BH0Y9G9 81 aa4.72□□□□□ -1.65
GACAT3-201ENST00000426539 MMP24-AS1A0A0U1RRL7 71 aa4.71□□□□□ -1.66
GACAT3-201ENST00000426539 FAM240AA0A1B0GVK7 77 aa4.71□□□□□ -1.66
GACAT3-201ENST00000426539 ACYP1P07311 99 aa4.71□□□□□ -1.66
GACAT3-201ENST00000426539 PCP4P48539 62 aa4.71□□□□□ -1.66
GACAT3-201ENST00000426539 C14orf132Q9NPU4 83 aa4.71□□□□□ -1.66
GACAT3-201ENST00000426539 H1FX-AS1Q4G0G2 97 aa4.7□□□□□ -1.66
GACAT3-201ENST00000426539 MRPL34Q9BQ48 92 aaKnown RBP4.7□□□□□ -1.66
GACAT3-201ENST00000426539 PDE6GP18545 87 aa4.69□□□□□ -1.66
GACAT3-201ENST00000426539 KRTAP6-3Q3LI67 103 aa4.69□□□□□ -1.66
GACAT3-201ENST00000426539 TMEM254Q8TBM7 123 aa4.69□□□□□ -1.66
GACAT3-201ENST00000426539 IGKV2-30P06310 120 aa4.67□□□□□ -1.66
GACAT3-201ENST00000426539 NREPQ16612 68 aa4.67□□□□□ -1.66
GACAT3-201ENST00000426539 K7EQZ3 153 aa4.66□□□□□ -1.66
GACAT3-201ENST00000426539 Q5W150 140 aa4.66□□□□□ -1.66
GACAT3-201ENST00000426539 hDV103S1A0JD37 113 aa4.65□□□□□ -1.67
GACAT3-201ENST00000426539 MT-ATP8P03928 68 aa4.64□□□□□ -1.67
GACAT3-201ENST00000426539 IGKV2D-30A0A075B6S6 120 aa4.63□□□□□ -1.67
GACAT3-201ENST00000426539 NDUFS5O43920 106 aa4.63□□□□□ -1.67
GACAT3-201ENST00000426539 SCGB1A1P11684 91 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms