RNA–Protein interactions for RNA: ENST00000424354.5

SREBF2-202, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 5,699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-202ENST00000424354 TENM4Q6N022 2769 aa8.47□□□□□ -1.05
SREBF2-202ENST00000424354 Q5W150 140 aa8.47□□□□□ -1.05
SREBF2-202ENST00000424354 CUBNO60494 3623 aa8.45□□□□□ -1.06
SREBF2-202ENST00000424354 CSAG1Q6PB30 78 aa8.45□□□□□ -1.06
SREBF2-202ENST00000424354 PLAC8Q9NZF1 115 aa8.44□□□□□ -1.06
SREBF2-202ENST00000424354 LINC00483Q53H64 154 aa8.43□□□□□ -1.06
SREBF2-202ENST00000424354 Q6ZSA8 131 aa8.41□□□□□ -1.06
SREBF2-202ENST00000424354 CAMK2N1Q7Z7J9 78 aa8.4□□□□□ -1.07
SREBF2-202ENST00000424354 SPENQ96T58 3664 aaKnown RBP8.39□□□□□ -1.07
SREBF2-202ENST00000424354 ASB16-AS1Q495Z4 193 aa8.38□□□□□ -1.07
SREBF2-202ENST00000424354 LCE6AA0A183 80 aa8.38□□□□□ -1.07
SREBF2-202ENST00000424354 TENM1Q9UKZ4 2725 aa8.37□□□□□ -1.07
SREBF2-202ENST00000424354 M0R2T5 61 aa8.36□□□□□ -1.07
SREBF2-202ENST00000424354 OTOGQ6ZRI0 2925 aa8.36□□□□□ -1.07
SREBF2-202ENST00000424354 KRTAP26-1Q6PEX3 210 aa8.35□□□□□ -1.07
SREBF2-202ENST00000424354 S4R3F8 94 aa8.35□□□□□ -1.07
SREBF2-202ENST00000424354 A0A0A0MQY5 61 aa8.33□□□□□ -1.08
SREBF2-202ENST00000424354 Q6ZR54 194 aa8.32□□□□□ -1.08
SREBF2-202ENST00000424354 VWFP04275 2813 aa8.31□□□□□ -1.08
SREBF2-202ENST00000424354 FBN1P35555 2871 aaKnown RBP8.29□□□□□ -1.08
SREBF2-202ENST00000424354 ROMO1P60602 79 aa8.29□□□□□ -1.08
SREBF2-202ENST00000424354 CSMD2Q7Z408 3487 aa8.29□□□□□ -1.08
SREBF2-202ENST00000424354 RPL37P61927 97 aaKnown RBP8.28□□□□□ -1.08
SREBF2-202ENST00000424354 KRTAP29-1A8MX34 341 aaPredicted RBP8.28□□□□□ -1.08
SREBF2-202ENST00000424354 KRTAP4-16G5E9R7 235 aaPredicted RBP8.25□□□□□ -1.09
SREBF2-202ENST00000424354 H1FX-AS1Q4G0G2 97 aa8.24□□□□□ -1.09
SREBF2-202ENST00000424354 PDZD2O15018 2839 aa8.23□□□□□ -1.09
SREBF2-202ENST00000424354 TENM3Q9P273 2699 aa8.23□□□□□ -1.09
SREBF2-202ENST00000424354 NBPF19A0A087WUL8 3843 aa8.22□□□□□ -1.09
SREBF2-202ENST00000424354 ZFHX3Q15911 3703 aa8.21□□□□□ -1.09
SREBF2-202ENST00000424354 BSNQ9UPA5 3926 aa8.2□□□□□ -1.1
SREBF2-202ENST00000424354 Q5VSD8 79 aa8.2□□□□□ -1.1
SREBF2-202ENST00000424354 R4GN34 69 aa8.18□□□□□ -1.1
SREBF2-202ENST00000424354 KRTAP1-5Q9BYS1 174 aa8.18□□□□□ -1.1
SREBF2-202ENST00000424354 SPATA8Q6RVD6 105 aa8.17□□□□□ -1.1
SREBF2-202ENST00000424354 A6NN06 94 aa8.12□□□□□ -1.11
SREBF2-202ENST00000424354 SEC61BP60468 96 aaKnown RBP8.1□□□□□ -1.11
SREBF2-202ENST00000424354 KRTAP10-1P60331 282 aa8.06□□□□□ -1.12
SREBF2-202ENST00000424354 PKD1L1Q8TDX9 2849 aa8.05□□□□□ -1.12
SREBF2-202ENST00000424354 KRTAP10-2P60368 255 aa8.03□□□□□ -1.12
SREBF2-202ENST00000424354 M0QZ58 72 aa8.03□□□□□ -1.12
SREBF2-202ENST00000424354 KRTAP25-1Q3LHN0 102 aa8.01□□□□□ -1.13
SREBF2-202ENST00000424354 PANO1I0J062 215 aa7.99□□□□□ -1.13
SREBF2-202ENST00000424354 A0A087X002 238 aa7.98□□□□□ -1.13
SREBF2-202ENST00000424354 NOTCH2NLQ7Z3S9 236 aa7.98□□□□□ -1.13
SREBF2-202ENST00000424354 ADM2Q7Z4H4 148 aa7.97□□□□□ -1.13
SREBF2-202ENST00000424354 KRTAP16-1A8MUX0 517 aa7.96□□□□□ -1.14
SREBF2-202ENST00000424354 TENM2Q9NT68 2774 aa7.95□□□□□ -1.14
SREBF2-202ENST00000424354 RPS29P62273 56 aaKnown RBP7.91□□□□□ -1.14
SREBF2-202ENST00000424354 TGP01266 2768 aa7.86□□□□□ -1.15
SREBF2-202ENST00000424354 VPS13CQ709C8 3753 aa7.86□□□□□ -1.15
SREBF2-202ENST00000424354 KRTAP11-1Q8IUC1 163 aa7.86□□□□□ -1.15
SREBF2-202ENST00000424354 KRTAP7-1Q8IUC3 87 aa7.86□□□□□ -1.15
SREBF2-202ENST00000424354 A8MU10 97 aa7.84□□□□□ -1.15
SREBF2-202ENST00000424354 DMBT1Q9UGM3 2413 aaPredicted RBP7.84□□□□□ -1.15
SREBF2-202ENST00000424354 TRRAPQ9Y4A5 3859 aa7.81□□□□□ -1.16
SREBF2-202ENST00000424354 KRTAP13-1Q8IUC0 172 aa7.81□□□□□ -1.16
SREBF2-202ENST00000424354 PLAC4Q8WY50 150 aa7.81□□□□□ -1.16
SREBF2-202ENST00000424354 FLG2Q5D862 2391 aaPredicted RBP7.79□□□□□ -1.16
SREBF2-202ENST00000424354 Q6ZRN7 208 aaPredicted RBP7.77□□□□□ -1.17
SREBF2-202ENST00000424354 NDUFAF8A1L188 74 aa7.74□□□□□ -1.17
SREBF2-202ENST00000424354 A8MUU9 505 aa7.72□□□□□ -1.17
SREBF2-202ENST00000424354 KRTAP13-2Q52LG2 175 aa7.71□□□□□ -1.17
SREBF2-202ENST00000424354 ANK3Q12955 4377 aaKnown RBP7.69□□□□□ -1.18
SREBF2-202ENST00000424354 ZNF469Q96JG9 3925 aaPredicted RBP7.67□□□□□ -1.18
SREBF2-202ENST00000424354 C20orf166-AS1Q96NR2 134 aa7.64□□□□□ -1.19
SREBF2-202ENST00000424354 SRRM2Q9UQ35 2752 aaKnown RBP7.57□□□□□ -1.2
SREBF2-202ENST00000424354 TNP1P09430 55 aa7.52□□□□□ -1.21
SREBF2-202ENST00000424354 A0A1B0GVY2 172 aa7.5□□□□□ -1.21
SREBF2-202ENST00000424354 PP632Q6XCG6 107 aa7.47□□□□□ -1.21
SREBF2-202ENST00000424354 FBN3Q75N90 2809 aa7.44□□□□□ -1.22
SREBF2-202ENST00000424354 C10orf95Q9H7T3 257 aa7.44□□□□□ -1.22
SREBF2-202ENST00000424354 H0YAA0 97 aa7.41□□□□□ -1.22
SREBF2-202ENST00000424354 COL7A1Q02388 2944 aa7.35□□□□□ -1.23
SREBF2-202ENST00000424354 P0C880 135 aa7.34□□□□□ -1.24
SREBF2-202ENST00000424354 ALMS1Q8TCU4 4167 aa7.32□□□□□ -1.24
SREBF2-202ENST00000424354 MEGF8Q7Z7M0 2845 aa7.32□□□□□ -1.24
SREBF2-202ENST00000424354 KRTAP1-4P0C5Y4 121 aa7.31□□□□□ -1.24
SREBF2-202ENST00000424354 AKAP9Q99996 3911 aa7.3□□□□□ -1.24
SREBF2-202ENST00000424354 XP32Q5T750 250 aa7.25□□□□□ -1.25
SREBF2-202ENST00000424354 CSMD3Q7Z407 3707 aa7.15□□□□□ -1.26
SREBF2-202ENST00000424354 KRTAP10-8P60410 259 aa7.13□□□□□ -1.27
SREBF2-202ENST00000424354 KRTAP13-3Q3SY46 172 aa7.12□□□□□ -1.27
SREBF2-202ENST00000424354 TPRXLQ17RH7 258 aa7.08□□□□□ -1.28
SREBF2-202ENST00000424354 ANK2Q01484 3957 aa7.04□□□□□ -1.28
SREBF2-202ENST00000424354 KRTAP10-10P60014 251 aa7□□□□□ -1.29
SREBF2-202ENST00000424354 HUWE1Q7Z6Z7 4374 aaKnown RBP6.99□□□□□ -1.29
SREBF2-202ENST00000424354 DNAH9Q9NYC9 4486 aa6.93□□□□□ -1.3
SREBF2-202ENST00000424354 DNHD1Q96M86 4753 aa6.91□□□□□ -1.3
SREBF2-202ENST00000424354 PRO2289Q9P1D8 64 aa6.9□□□□□ -1.3
SREBF2-202ENST00000424354 KRTAP12-2P59991 146 aa6.9□□□□□ -1.31
SREBF2-202ENST00000424354 DNAH6Q9C0G6 4158 aa6.85□□□□□ -1.31
SREBF2-202ENST00000424354 KRTAP13-4Q3LI77 160 aa6.83□□□□□ -1.32
SREBF2-202ENST00000424354 DNAH3Q8TD57 4116 aa6.8□□□□□ -1.32
SREBF2-202ENST00000424354 KRTAP12-1P59990 96 aa6.79□□□□□ -1.32
SREBF2-202ENST00000424354 PLECQ15149 4684 aaKnown RBP6.76□□□□□ -1.33
SREBF2-202ENST00000424354 DYNC2H1Q8NCM8 4307 aaKnown RBP6.75□□□□□ -1.33
SREBF2-202ENST00000424354 DNAH1Q9P2D7 4330 aa6.74□□□□□ -1.33
SREBF2-202ENST00000424354 KRTAP3-1Q9BYR8 98 aa6.7□□□□□ -1.34
SREBF2-202ENST00000424354 KRTAP10-4P60372 401 aaPredicted RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms